RNA–Protein interactions for RNA: ENSMUST00000044166.8

Cdc40-201, Transcript of Pre-mRNA-processing factor 17, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdc40, Length 3,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40-201ENSMUST00000044166 Znf771Q8BJ90 317 aa10.19□□□□□ -0.78
Cdc40-201ENSMUST00000044166 Xrn1P97789 1719 aaKnown RBP10.19□□□□□ -0.78
Cdc40-201ENSMUST00000044166 E2f4Q8R0K9 410 aa10.19□□□□□ -0.78
Cdc40-201ENSMUST00000044166 Iqgap3F8VQ29 1632 aa10.19□□□□□ -0.78
Cdc40-201ENSMUST00000044166 Znf608Q56A10 1511 aa10.18□□□□□ -0.78
Cdc40-201ENSMUST00000044166 Cavin4A2AMM0 362 aa10.18□□□□□ -0.78
Cdc40-201ENSMUST00000044166 Adgrl1Q80TR1 1466 aa10.18□□□□□ -0.78
Cdc40-201ENSMUST00000044166 Kidins220E9Q9B7 1793 aa10.18□□□□□ -0.78
Cdc40-201ENSMUST00000044166 Efcab6Q6P1E8 1516 aa10.18□□□□□ -0.78
Cdc40-201ENSMUST00000044166 Arhgap4B1AUY3 965 aa10.18□□□□□ -0.78
Cdc40-201ENSMUST00000044166 Tfip11Q9ERA6 838 aaKnown RBP10.18□□□□□ -0.78
Cdc40-201ENSMUST00000044166 CenpjQ569L8 1344 aa10.18□□□□□ -0.78
Cdc40-201ENSMUST00000044166 Ttc21aQ8C0S4 1314 aa10.18□□□□□ -0.78
Cdc40-201ENSMUST00000044166 Pabpn1Q8CCS6 302 aaKnown RBP10.17□□□□□ -0.78
Cdc40-201ENSMUST00000044166 Eif2ak4Q9QZ05 1648 aa10.17□□□□□ -0.78
Cdc40-201ENSMUST00000044166 Ankrd50F7BE84 1390 aa10.17□□□□□ -0.78
Cdc40-201ENSMUST00000044166 Skint5A7XUY5 1461 aa10.17□□□□□ -0.78
Cdc40-201ENSMUST00000044166 Wdr63B2RY71 923 aa10.17□□□□□ -0.78
Cdc40-201ENSMUST00000044166 Casq1O09165 405 aa10.17□□□□□ -0.78
Cdc40-201ENSMUST00000044166 Bms1Q6PGF5 1284 aaKnown RBP10.17□□□□□ -0.78
Cdc40-201ENSMUST00000044166 GorabQ8BRM2 368 aa10.17□□□□□ -0.78
Cdc40-201ENSMUST00000044166 Abca8aQ8K442 1620 aa10.17□□□□□ -0.78
Cdc40-201ENSMUST00000044166 MlecQ6ZQI3 291 aaKnown RBP10.16□□□□□ -0.78
Cdc40-201ENSMUST00000044166 Ttc37F8VPK0 1563 aa10.16□□□□□ -0.78
Cdc40-201ENSMUST00000044166 Erich6bQ9D4S6 220 aa10.16□□□□□ -0.78
Cdc40-201ENSMUST00000044166 Dhx16G3X8X0 1044 aaKnown RBP10.16□□□□□ -0.78
Cdc40-201ENSMUST00000044166 Tbc1d9Q3UYK3 1264 aa10.16□□□□□ -0.78
Cdc40-201ENSMUST00000044166 1700010I14RikQ7TPG0 532 aa10.16□□□□□ -0.78
Cdc40-201ENSMUST00000044166 Nutm1Q8BHP2 1126 aa10.16□□□□□ -0.78
Cdc40-201ENSMUST00000044166 Pwp2Q8BU03 919 aaKnown RBP10.16□□□□□ -0.78
Cdc40-201ENSMUST00000044166 Exosc9Q9JHI7 438 aaKnown RBP10.16□□□□□ -0.78
Cdc40-201ENSMUST00000044166 Tmx3Q8BXZ1 456 aa10.15□□□□□ -0.78
Cdc40-201ENSMUST00000044166 PalldQ9ET54 1408 aa10.15□□□□□ -0.78
Cdc40-201ENSMUST00000044166 Med14A2ABV5 1459 aaKnown RBP10.15□□□□□ -0.78
Cdc40-201ENSMUST00000044166 Sipa1l1Q8C0T5 1782 aa10.15□□□□□ -0.78
Cdc40-201ENSMUST00000044166 LifrP42703 1092 aa10.15□□□□□ -0.78
Cdc40-201ENSMUST00000044166 Nek4Q9Z1J2 792 aa10.15□□□□□ -0.78
Cdc40-201ENSMUST00000044166 Hecw2Q6I6G8 1578 aa10.15□□□□□ -0.78
Cdc40-201ENSMUST00000044166 Slc7a3P70423 618 aa10.15□□□□□ -0.79
Cdc40-201ENSMUST00000044166 Aplp1Q03157 653 aa10.15□□□□□ -0.79
Cdc40-201ENSMUST00000044166 Tmco5bQ80X59 307 aa10.15□□□□□ -0.79
Cdc40-201ENSMUST00000044166 PaskQ8CEE6 1383 aa10.15□□□□□ -0.79
Cdc40-201ENSMUST00000044166 Bag4Q8CI61 457 aa10.15□□□□□ -0.79
Cdc40-201ENSMUST00000044166 PtmsQ9D0J8 101 aaKnown RBP10.15□□□□□ -0.79
Cdc40-201ENSMUST00000044166 Plxnc1Q9QZC2 1574 aa10.15□□□□□ -0.79
Cdc40-201ENSMUST00000044166 Fndc1E9Q043 1732 aa10.14□□□□□ -0.79
Cdc40-201ENSMUST00000044166 Abca6Q8K441 1624 aa10.14□□□□□ -0.79
Cdc40-201ENSMUST00000044166 Nos1Q9Z0J4 1429 aa10.14□□□□□ -0.79
Cdc40-201ENSMUST00000044166 MaddQ80U28 1577 aa10.14□□□□□ -0.79
Cdc40-201ENSMUST00000044166 Aldh1l1Q8R0Y6 902 aa10.14□□□□□ -0.79
Cdc40-201ENSMUST00000044166 Tmem131lQ3U3D7 1597 aa10.14□□□□□ -0.79
Cdc40-201ENSMUST00000044166 PtmaP26350 111 aa10.13□□□□□ -0.79
Cdc40-201ENSMUST00000044166 Pdcl2Q78Y63 240 aa10.13□□□□□ -0.79
Cdc40-201ENSMUST00000044166 MvpQ9EQK5 861 aa10.13□□□□□ -0.79
Cdc40-201ENSMUST00000044166 Abca9Q8K449 1623 aa10.13□□□□□ -0.79
Cdc40-201ENSMUST00000044166 Adgrb3Q80ZF8 1522 aa10.13□□□□□ -0.79
Cdc40-201ENSMUST00000044166 Gse1Q3U3C9 1213 aa10.13□□□□□ -0.79
Cdc40-201ENSMUST00000044166 Ush1cQ9ES64 910 aa10.13□□□□□ -0.79
Cdc40-201ENSMUST00000044166 Lemd3Q9WU40 921 aa10.13□□□□□ -0.79
Cdc40-201ENSMUST00000044166 Cgnl1Q6AW69 1298 aa10.13□□□□□ -0.79
Cdc40-201ENSMUST00000044166 Bloc1s4Q8VED2 215 aa10.13□□□□□ -0.79
Cdc40-201ENSMUST00000044166 Swt1Q9DBQ9 907 aa10.13□□□□□ -0.79
Cdc40-201ENSMUST00000044166 Nectin2P32507 530 aa10.12□□□□□ -0.79
Cdc40-201ENSMUST00000044166 Fez1Q8K0X8 392 aa10.12□□□□□ -0.79
Cdc40-201ENSMUST00000044166 ScaperF8VQ70 1398 aaKnown RBP10.12□□□□□ -0.79
Cdc40-201ENSMUST00000044166 Pik3r4Q8VD65 1358 aa10.12□□□□□ -0.79
Cdc40-201ENSMUST00000044166 Znf518aB2RRF6 1478 aaKnown RBP10.12□□□□□ -0.79
Cdc40-201ENSMUST00000044166 Q3UPC7 1272 aa10.12□□□□□ -0.79
Cdc40-201ENSMUST00000044166 Plekhm2Q80TQ5 1018 aa10.12□□□□□ -0.79
Cdc40-201ENSMUST00000044166 Ercc6lQ8BHK9 1240 aa10.12□□□□□ -0.79
Cdc40-201ENSMUST00000044166 Zmynd15Q8C0R7 736 aa10.12□□□□□ -0.79
Cdc40-201ENSMUST00000044166 CarsQ9ER72 831 aaKnown RBP10.12□□□□□ -0.79
Cdc40-201ENSMUST00000044166 Uhrf1bp1B2KF50 1429 aa10.12□□□□□ -0.79
Cdc40-201ENSMUST00000044166 Naip7Q9JIB3 1402 aa10.12□□□□□ -0.79
Cdc40-201ENSMUST00000044166 Ino80Q6ZPV2 1559 aa10.12□□□□□ -0.79
Cdc40-201ENSMUST00000044166 Ehbp1l1Q99MS7 1716 aa10.12□□□□□ -0.79
Cdc40-201ENSMUST00000044166 Pcdh10E9PXQ7 1057 aa10.11□□□□□ -0.79
Cdc40-201ENSMUST00000044166 ImpactO55091 318 aa10.11□□□□□ -0.79
Cdc40-201ENSMUST00000044166 Slc52a2Q9D8F3 450 aa10.11□□□□□ -0.79
Cdc40-201ENSMUST00000044166 Dmrtc1Q9D9R7 182 aa10.11□□□□□ -0.79
Cdc40-201ENSMUST00000044166 Lrrc7Q80TE7 1490 aa10.11□□□□□ -0.79
Cdc40-201ENSMUST00000044166 Ankrd44B2RXR6 993 aa10.11□□□□□ -0.79
Cdc40-201ENSMUST00000044166 Zkscan1Q8BGS3 561 aaKnown RBP10.11□□□□□ -0.79
Cdc40-201ENSMUST00000044166 Trpm1Q2TV84 1622 aa10.11□□□□□ -0.79
Cdc40-201ENSMUST00000044166 Prr29B1ARI9 187 aa10.11□□□□□ -0.79
Cdc40-201ENSMUST00000044166 Anapc15-psA0A140T8L6 141 aa10.1□□□□□ -0.79
Cdc40-201ENSMUST00000044166 Becn1O88597 448 aa10.1□□□□□ -0.79
Cdc40-201ENSMUST00000044166 Fchsd2Q3USJ8 740 aa10.1□□□□□ -0.79
Cdc40-201ENSMUST00000044166 Fam177a1Q8BR63 207 aa10.1□□□□□ -0.79
Cdc40-201ENSMUST00000044166 Kiaa0556Q8C753 1610 aa10.1□□□□□ -0.79
Cdc40-201ENSMUST00000044166 HnrnpuQ8VEK3 800 aaKnown RBP10.1□□□□□ -0.79
Cdc40-201ENSMUST00000044166 Znf541Q0GGX2 1363 aa10.1□□□□□ -0.79
Cdc40-201ENSMUST00000044166 AU022751B1B0V2 589 aa10.1□□□□□ -0.79
Cdc40-201ENSMUST00000044166 CenppQ9CZ92 286 aa10.1□□□□□ -0.79
Cdc40-201ENSMUST00000044166 Nrxn1Q9CS84 1514 aa10.09□□□□□ -0.79
Cdc40-201ENSMUST00000044166 Rasa1E9PYG6 1038 aa10.09□□□□□ -0.79
Cdc40-201ENSMUST00000044166 Ccdc146E9Q9F7 977 aa10.09□□□□□ -0.79
Cdc40-201ENSMUST00000044166 MsnP26041 577 aaKnown RBP10.09□□□□□ -0.79
Cdc40-201ENSMUST00000044166 Eif4g2Q62448 906 aaKnown RBP10.09□□□□□ -0.79
Cdc40-201ENSMUST00000044166 Ppip5k2Q6ZQB6 1129 aa10.09□□□□□ -0.79
Retrieved 100 of 22,080 RNA–protein pairs in 19.8 ms