RNA–Protein interactions for RNA: ENSMUST00000035340.13

Usp54-202, Transcript of Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Usp54, Length 6,495 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54-202ENSMUST00000035340 Gm1043A0A140LJC2 1431 aa9.23□□□□□ -0.93
Usp54-202ENSMUST00000035340 Ell2Q3UKU1 639 aa9.23□□□□□ -0.93
Usp54-202ENSMUST00000035340 Cfap69Q8BH53 942 aa9.23□□□□□ -0.93
Usp54-202ENSMUST00000035340 Ttc19Q8CC21 365 aa9.23□□□□□ -0.93
Usp54-202ENSMUST00000035340 Sytl4Q9R0Q1 673 aa9.23□□□□□ -0.93
Usp54-202ENSMUST00000035340 Map4k4P97820 1233 aaKnown RBP9.23□□□□□ -0.93
Usp54-202ENSMUST00000035340 Mical1Q8VDP3 1048 aa9.23□□□□□ -0.93
Usp54-202ENSMUST00000035340 Cyp26c1B2RXA7 518 aa9.23□□□□□ -0.93
Usp54-202ENSMUST00000035340 Zrsr2Q62377 462 aaKnown RBP9.23□□□□□ -0.93
Usp54-202ENSMUST00000035340 Slc5a1Q8C3K6 665 aa9.23□□□□□ -0.93
Usp54-202ENSMUST00000035340 Polr3aB2RXC6 1390 aa9.23□□□□□ -0.93
Usp54-202ENSMUST00000035340 Ncapd3Q6ZQK0 1506 aa9.23□□□□□ -0.93
Usp54-202ENSMUST00000035340 TbcaP48428 108 aaKnown RBP9.23□□□□□ -0.93
Usp54-202ENSMUST00000035340 Q9D9S1 216 aa9.23□□□□□ -0.93
Usp54-202ENSMUST00000035340 Abl1P00520 1123 aa9.23□□□□□ -0.93
Usp54-202ENSMUST00000035340 Slc7a3P70423 618 aa9.23□□□□□ -0.93
Usp54-202ENSMUST00000035340 PalmQ9Z0P4 383 aa9.23□□□□□ -0.93
Usp54-202ENSMUST00000035340 Exoc5Q3TPX4 708 aa9.22□□□□□ -0.93
Usp54-202ENSMUST00000035340 Ftsj3Q9DBE9 838 aaKnown RBP9.22□□□□□ -0.93
Usp54-202ENSMUST00000035340 Abcc5Q9R1X5 1436 aa9.22□□□□□ -0.93
Usp54-202ENSMUST00000035340 Mapkbp1Q6NS57 1503 aa9.22□□□□□ -0.93
Usp54-202ENSMUST00000035340 Naip2Q9QUK4 1447 aa9.22□□□□□ -0.93
Usp54-202ENSMUST00000035340 Nectin2P32507 530 aa9.22□□□□□ -0.93
Usp54-202ENSMUST00000035340 Spg7Q3ULF4 781 aa9.22□□□□□ -0.93
Usp54-202ENSMUST00000035340 Stxbp4Q9WV89 557 aa9.22□□□□□ -0.93
Usp54-202ENSMUST00000035340 Ddx58Q6Q899 926 aa9.22□□□□□ -0.93
Usp54-202ENSMUST00000035340 PdcQ9QW08 244 aa9.22□□□□□ -0.93
Usp54-202ENSMUST00000035340 NinlQ6ZQ12 1394 aa9.22□□□□□ -0.93
Usp54-202ENSMUST00000035340 Ush1cQ9ES64 910 aa9.22□□□□□ -0.93
Usp54-202ENSMUST00000035340 Nap1l5Q9JJF0 156 aa9.22□□□□□ -0.93
Usp54-202ENSMUST00000035340 IkQ9Z1M8 557 aaKnown RBP9.22□□□□□ -0.93
Usp54-202ENSMUST00000035340 Fam135aQ6NS59 1506 aa9.21□□□□□ -0.93
Usp54-202ENSMUST00000035340 Tnnt2P50752 301 aa9.21□□□□□ -0.93
Usp54-202ENSMUST00000035340 Dusp27Q148W8 1138 aa9.21□□□□□ -0.93
Usp54-202ENSMUST00000035340 SafbD3YXK2 937 aaKnown RBP9.21□□□□□ -0.93
Usp54-202ENSMUST00000035340 Lrrfip1Q3UZ39 729 aaKnown RBP9.21□□□□□ -0.93
Usp54-202ENSMUST00000035340 Gm156Q58A37 223 aa9.21□□□□□ -0.93
Usp54-202ENSMUST00000035340 Utp3Q9JI13 469 aaKnown RBP9.21□□□□□ -0.93
Usp54-202ENSMUST00000035340 Nek4Q9Z1J2 792 aa9.21□□□□□ -0.93
Usp54-202ENSMUST00000035340 Ppp2r3aB2RXC8 1150 aa9.21□□□□□ -0.94
Usp54-202ENSMUST00000035340 EzrP26040 586 aaKnown RBP9.21□□□□□ -0.94
Usp54-202ENSMUST00000035340 HmmrQ00547 794 aaKnown RBP9.21□□□□□ -0.94
Usp54-202ENSMUST00000035340 Ak7Q9D2H2 614 aa9.21□□□□□ -0.94
Usp54-202ENSMUST00000035340 Stim1P70302 685 aa9.21□□□□□ -0.94
Usp54-202ENSMUST00000035340 Cct4P80315 539 aaKnown RBP9.21□□□□□ -0.94
Usp54-202ENSMUST00000035340 Kdm3aQ6PCM1 1323 aa9.21□□□□□ -0.94
Usp54-202ENSMUST00000035340 Luc7lQ9CYI4 371 aaKnown RBP9.21□□□□□ -0.94
Usp54-202ENSMUST00000035340 Gtf2f1Q3THK3 508 aaKnown RBP9.2□□□□□ -0.94
Usp54-202ENSMUST00000035340 Cdc45Q9Z1X9 566 aa9.2□□□□□ -0.94
Usp54-202ENSMUST00000035340 Bms1Q6PGF5 1284 aaKnown RBP9.2□□□□□ -0.94
Usp54-202ENSMUST00000035340 Pank1Q8K4K6 548 aa9.2□□□□□ -0.94
Usp54-202ENSMUST00000035340 Ythdc2B2RR83 1445 aaKnown RBP9.2□□□□□ -0.94
Usp54-202ENSMUST00000035340 Zscan20B2KFW1 1030 aa9.2□□□□□ -0.94
Usp54-202ENSMUST00000035340 Lmbr1Q9JIT0 490 aa9.2□□□□□ -0.94
Usp54-202ENSMUST00000035340 Klf15Q9EPW2 415 aa9.19□□□□□ -0.94
Usp54-202ENSMUST00000035340 Znf692Q3U381 531 aa9.19□□□□□ -0.94
Usp54-202ENSMUST00000035340 Stk3Q9JI10 497 aa9.19□□□□□ -0.94
Usp54-202ENSMUST00000035340 Ankib1Q6ZPS6 1085 aa9.19□□□□□ -0.94
Usp54-202ENSMUST00000035340 MvpQ9EQK5 861 aa9.19□□□□□ -0.94
Usp54-202ENSMUST00000035340 Znhit6Q3UFB2 460 aaKnown RBP9.19□□□□□ -0.94
Usp54-202ENSMUST00000035340 Pcf11G3X9Z4 1553 aa9.19□□□□□ -0.94
Usp54-202ENSMUST00000035340 SlkO54988 1233 aa9.19□□□□□ -0.94
Usp54-202ENSMUST00000035340 Scaf1Q5U4C3 1256 aaKnown RBP9.19□□□□□ -0.94
Usp54-202ENSMUST00000035340 Vps37dQ810I0 261 aa9.19□□□□□ -0.94
Usp54-202ENSMUST00000035340 Dennd4bQ3U1Y4 1499 aa9.18□□□□□ -0.94
Usp54-202ENSMUST00000035340 Larp1bA0A0A6YXJ7 370 aaKnown RBP9.18□□□□□ -0.94
Usp54-202ENSMUST00000035340 GnpatP98192 678 aa9.18□□□□□ -0.94
Usp54-202ENSMUST00000035340 Nol8Q3UHX0 1147 aaKnown RBP9.18□□□□□ -0.94
Usp54-202ENSMUST00000035340 Stk38Q91VJ4 465 aa9.18□□□□□ -0.94
Usp54-202ENSMUST00000035340 Tmod2Q9JKK7 351 aa9.18□□□□□ -0.94
Usp54-202ENSMUST00000035340 Naip6Q9JIB6 1403 aa9.18□□□□□ -0.94
Usp54-202ENSMUST00000035340 Apaf1O88879 1249 aa9.18□□□□□ -0.94
Usp54-202ENSMUST00000035340 Hnrnpul1Q8VDM6 859 aaKnown RBP9.18□□□□□ -0.94
Usp54-202ENSMUST00000035340 Bicdl1A0JNT9 577 aa9.17□□□□□ -0.94
Usp54-202ENSMUST00000035340 Cwc27Q3TKY6 469 aa9.17□□□□□ -0.94
Usp54-202ENSMUST00000035340 Srgap3Q812A2 1099 aa9.17□□□□□ -0.94
Usp54-202ENSMUST00000035340 Ppip5k1A2ARP1 1436 aa9.17□□□□□ -0.94
Usp54-202ENSMUST00000035340 Commd10Q8JZY2 202 aa9.17□□□□□ -0.94
Usp54-202ENSMUST00000035340 Ccdc96Q9CR92 584 aa9.17□□□□□ -0.94
Usp54-202ENSMUST00000035340 Mad1l1Q9WTX8 717 aaKnown RBP9.17□□□□□ -0.94
Usp54-202ENSMUST00000035340 Fam50bQ9WTJ8 334 aa9.17□□□□□ -0.94
Usp54-202ENSMUST00000035340 Cfap74Q3UY96 1578 aa9.17□□□□□ -0.94
Usp54-202ENSMUST00000035340 Exoc6bA6H5Z3 810 aa9.17□□□□□ -0.94
Usp54-202ENSMUST00000035340 Hs1bp3Q3TC93 395 aa9.17□□□□□ -0.94
Usp54-202ENSMUST00000035340 Tmem87bQ8BKU8 555 aa9.17□□□□□ -0.94
Usp54-202ENSMUST00000035340 GlmnQ8BZM1 596 aa9.17□□□□□ -0.94
Usp54-202ENSMUST00000035340 Olr1Q9EQ09 363 aa9.17□□□□□ -0.94
Usp54-202ENSMUST00000035340 Ccdc183A2AJB1 534 aa9.16□□□□□ -0.94
Usp54-202ENSMUST00000035340 Rfx1P48377 963 aa9.16□□□□□ -0.94
Usp54-202ENSMUST00000035340 Ankle2Q6P1H6 964 aa9.16□□□□□ -0.94
Usp54-202ENSMUST00000035340 Ppm1eQ80TL0 749 aa9.16□□□□□ -0.94
Usp54-202ENSMUST00000035340 Ccdc172Q810N9 267 aa9.16□□□□□ -0.94
Usp54-202ENSMUST00000035340 Nutm1Q8BHP2 1126 aa9.16□□□□□ -0.94
Usp54-202ENSMUST00000035340 Fsd2Q8BZ52 692 aa9.16□□□□□ -0.94
Usp54-202ENSMUST00000035340 Tango6Q8C3S2 1079 aa9.16□□□□□ -0.94
Usp54-202ENSMUST00000035340 TnikP83510 1323 aa9.16□□□□□ -0.94
Usp54-202ENSMUST00000035340 Wdr7Q920I9 1489 aa9.16□□□□□ -0.94
Usp54-202ENSMUST00000035340 PrxO55103 1391 aa9.16□□□□□ -0.94
Usp54-202ENSMUST00000035340 MycnP03966 462 aaKnown RBP9.16□□□□□ -0.94
Usp54-202ENSMUST00000035340 EappQ5BU09 281 aa9.16□□□□□ -0.94
Retrieved 100 of 22,080 RNA–protein pairs in 12.7 ms