RNA–Protein interactions for RNA: ENSMUST00000034060.6

Sh3rf1-201, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sh3rf1, Length 5,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-201ENSMUST00000034060 Pafah1b1P63005 410 aaKnown RBP27.23■■□□□ 1.95
Sh3rf1-201ENSMUST00000034060 Ddx19aQ61655 478 aaKnown RBP27.23■■□□□ 1.95
Sh3rf1-201ENSMUST00000034060 Larp1Q6ZQ58 1072 aaKnown RBP27.23■■□□□ 1.95
Sh3rf1-201ENSMUST00000034060 Sos1Q62245 1319 aa27.22■■□□□ 1.95
Sh3rf1-201ENSMUST00000034060 Kcnh8P59111 1102 aa27.22■■□□□ 1.95
Sh3rf1-201ENSMUST00000034060 Slc13a4Q8BZ82 625 aa27.22■■□□□ 1.95
Sh3rf1-201ENSMUST00000034060 Gnl2Q99LH1 728 aaKnown RBP27.22■■□□□ 1.95
Sh3rf1-201ENSMUST00000034060 Cyp26c1B2RXA7 518 aa27.21■■□□□ 1.95
Sh3rf1-201ENSMUST00000034060 Gm10471E9Q1C7 252 aa27.21■■□□□ 1.95
Sh3rf1-201ENSMUST00000034060 Cbx1P83917 185 aaKnown RBP27.21■■□□□ 1.95
Sh3rf1-201ENSMUST00000034060 Frmd3Q8BHD4 595 aa27.21■■□□□ 1.95
Sh3rf1-201ENSMUST00000034060 Map4k4P97820 1233 aaKnown RBP27.2■■□□□ 1.95
Sh3rf1-201ENSMUST00000034060 Abcf1Q6P542 837 aaKnown RBP27.2■■□□□ 1.95
Sh3rf1-201ENSMUST00000034060 Cdc37l1Q9CZP7 335 aa27.2■■□□□ 1.95
Sh3rf1-201ENSMUST00000034060 Srgap3Q812A2 1099 aa27.2■■□□□ 1.94
Sh3rf1-201ENSMUST00000034060 Wasf1Q8R5H6 559 aa27.2■■□□□ 1.94
Sh3rf1-201ENSMUST00000034060 Ehmt1Q5DW34 1296 aa27.2■■□□□ 1.94
Sh3rf1-201ENSMUST00000034060 Tmc1Q8R4P5 757 aa27.19■■□□□ 1.94
Sh3rf1-201ENSMUST00000034060 Tfip11Q9ERA6 838 aaKnown RBP27.19■■□□□ 1.94
Sh3rf1-201ENSMUST00000034060 Il16O54824 1322 aa27.19■■□□□ 1.94
Sh3rf1-201ENSMUST00000034060 Fez2Q6TYB5 348 aa27.19■■□□□ 1.94
Sh3rf1-201ENSMUST00000034060 Zfp644E9QA22 1323 aa27.18■■□□□ 1.94
Sh3rf1-201ENSMUST00000034060 Ppp1r9bQ6R891 817 aaKnown RBP27.18■■□□□ 1.94
Sh3rf1-201ENSMUST00000034060 Paxbp1P58501 919 aa27.18■■□□□ 1.94
Sh3rf1-201ENSMUST00000034060 TatQ8QZR1 454 aa27.18■■□□□ 1.94
Sh3rf1-201ENSMUST00000034060 TimelessQ9R1X4 1197 aa27.18■■□□□ 1.94
Sh3rf1-201ENSMUST00000034060 Cwc27Q3TKY6 469 aa27.17■■□□□ 1.94
Sh3rf1-201ENSMUST00000034060 Ptpdc1Q6NZK8 747 aa27.17■■□□□ 1.94
Sh3rf1-201ENSMUST00000034060 BbxQ8VBW5 907 aa27.17■■□□□ 1.94
Sh3rf1-201ENSMUST00000034060 Eif5P59325 429 aaKnown RBP27.17■■□□□ 1.94
Sh3rf1-201ENSMUST00000034060 Lrrfip1Q3UZ39 729 aaKnown RBP27.17■■□□□ 1.94
Sh3rf1-201ENSMUST00000034060 Rufy2Q8R4C2 606 aa27.17■■□□□ 1.94
Sh3rf1-201ENSMUST00000034060 TxlnaQ6PAM1 554 aaKnown RBP27.17■■□□□ 1.94
Sh3rf1-201ENSMUST00000034060 Fsd1Q7TPM6 496 aa27.17■■□□□ 1.94
Sh3rf1-201ENSMUST00000034060 NrkQ9R0G8 1455 aa27.16■■□□□ 1.94
Sh3rf1-201ENSMUST00000034060 Tiam1Q60610 1591 aa27.16■■□□□ 1.94
Sh3rf1-201ENSMUST00000034060 Soga1E1U8D0 1418 aa27.16■■□□□ 1.94
Sh3rf1-201ENSMUST00000034060 Stard3nlQ9DCI3 235 aa27.16■■□□□ 1.94
Sh3rf1-201ENSMUST00000034060 Trap1aP19473 224 aa27.15■■□□□ 1.94
Sh3rf1-201ENSMUST00000034060 Prm3Q62100 101 aa27.15■■□□□ 1.94
Sh3rf1-201ENSMUST00000034060 Arap1Q4LDD4 1452 aa27.15■■□□□ 1.94
Sh3rf1-201ENSMUST00000034060 Cc2d2aQ8CFW7 1633 aa27.14■■□□□ 1.93
Sh3rf1-201ENSMUST00000034060 Ccdc191J3QQ27 883 aa27.14■■□□□ 1.93
Sh3rf1-201ENSMUST00000034060 ImmtQ8CAQ8 757 aaKnown RBP27.14■■□□□ 1.93
Sh3rf1-201ENSMUST00000034060 Gm7361D3Z6R1 267 aa27.13■■□□□ 1.93
Sh3rf1-201ENSMUST00000034060 Gm42641I6L9G2 585 aa27.13■■□□□ 1.93
Sh3rf1-201ENSMUST00000034060 AtripQ8BMG1 785 aa27.13■■□□□ 1.93
Sh3rf1-201ENSMUST00000034060 BcanQ61361 883 aa27.13■■□□□ 1.93
Sh3rf1-201ENSMUST00000034060 Cep89Q9CZX2 791 aa27.13■■□□□ 1.93
Sh3rf1-201ENSMUST00000034060 L3mbtl2P59178 703 aa27.13■■□□□ 1.93
Sh3rf1-201ENSMUST00000034060 Aldh1l1Q8R0Y6 902 aa27.13■■□□□ 1.93
Sh3rf1-201ENSMUST00000034060 Asxl1P59598 1514 aa27.12■■□□□ 1.93
Sh3rf1-201ENSMUST00000034060 Gm21671G3UY31 267 aa27.12■■□□□ 1.93
Sh3rf1-201ENSMUST00000034060 Cct4P80315 539 aaKnown RBP27.12■■□□□ 1.93
Sh3rf1-201ENSMUST00000034060 IbtkQ6ZPR6 1352 aaKnown RBP27.12■■□□□ 1.93
Sh3rf1-201ENSMUST00000034060 Maats1Q8BRC6 783 aa27.11■■□□□ 1.93
Sh3rf1-201ENSMUST00000034060 Krt84Q99M73 603 aa27.11■■□□□ 1.93
Sh3rf1-201ENSMUST00000034060 Zscan20B2KFW1 1030 aa27.1■■□□□ 1.93
Sh3rf1-201ENSMUST00000034060 Bcl2l13P59017 434 aa27.1■■□□□ 1.93
Sh3rf1-201ENSMUST00000034060 Maco1Q7TQE6 664 aaKnown RBP27.1■■□□□ 1.93
Sh3rf1-201ENSMUST00000034060 Rnf187Q8BFX1 236 aa27.1■■□□□ 1.93
Sh3rf1-201ENSMUST00000034060 Arhgap5P97393 1501 aa27.09■■□□□ 1.93
Sh3rf1-201ENSMUST00000034060 Jakmip3Q5DTN8 844 aa27.09■■□□□ 1.93
Sh3rf1-201ENSMUST00000034060 Erlin1Q91X78 346 aa27.09■■□□□ 1.93
Sh3rf1-201ENSMUST00000034060 Ccdc39Q9D5Y1 937 aa27.09■■□□□ 1.93
Sh3rf1-201ENSMUST00000034060 Cabp2Q9JLK4 216 aa27.09■■□□□ 1.93
Sh3rf1-201ENSMUST00000034060 Sel1lQ9Z2G6 790 aa27.09■■□□□ 1.93
Sh3rf1-201ENSMUST00000034060 Hspa4Q61316 841 aa27.08■■□□□ 1.93
Sh3rf1-201ENSMUST00000034060 Uri1Q3TLD5 531 aa27.08■■□□□ 1.93
Sh3rf1-201ENSMUST00000034060 Abl1P00520 1123 aa27.07■■□□□ 1.92
Sh3rf1-201ENSMUST00000034060 Hdgfl1Q2VPR5 283 aa27.07■■□□□ 1.92
Sh3rf1-201ENSMUST00000034060 Nol8Q3UHX0 1147 aaKnown RBP27.07■■□□□ 1.92
Sh3rf1-201ENSMUST00000034060 Washc4Q3UMB9 1173 aa27.07■■□□□ 1.92
Sh3rf1-201ENSMUST00000034060 Paf1Q8K2T8 535 aa27.07■■□□□ 1.92
Sh3rf1-201ENSMUST00000034060 Smc1bQ920F6 1248 aa27.07■■□□□ 1.92
Sh3rf1-201ENSMUST00000034060 Eva1cP58659 440 aa27.06■■□□□ 1.92
Sh3rf1-201ENSMUST00000034060 Pms1Q8K119 917 aa27.06■■□□□ 1.92
Sh3rf1-201ENSMUST00000034060 Zpr1Q62384 459 aa27.06■■□□□ 1.92
Sh3rf1-201ENSMUST00000034060 Ankrd1Q9CR42 319 aa27.06■■□□□ 1.92
Sh3rf1-201ENSMUST00000034060 Gm18336A0A140LIU8 765 aa27.06■■□□□ 1.92
Sh3rf1-201ENSMUST00000034060 TbcaP48428 108 aaKnown RBP27.06■■□□□ 1.92
Sh3rf1-201ENSMUST00000034060 Fsd2Q8BZ52 692 aa27.06■■□□□ 1.92
Sh3rf1-201ENSMUST00000034060 IncenpQ9WU62 880 aa27.06■■□□□ 1.92
Sh3rf1-201ENSMUST00000034060 PrxO55103 1391 aa27.06■■□□□ 1.92
Sh3rf1-201ENSMUST00000034060 MpripP97434 1024 aa27.05■■□□□ 1.92
Sh3rf1-201ENSMUST00000034060 Phlpp2Q8BXA7 1320 aa27.05■■□□□ 1.92
Sh3rf1-201ENSMUST00000034060 Irgm2A0A140LIF8 407 aa27.05■■□□□ 1.92
Sh3rf1-201ENSMUST00000034060 Trim25Q61510 634 aaKnown RBP27.05■■□□□ 1.92
Sh3rf1-201ENSMUST00000034060 Mipol1Q9D9F8 279 aa27.05■■□□□ 1.92
Sh3rf1-201ENSMUST00000034060 Nucb2P81117 420 aa27.04■■□□□ 1.92
Sh3rf1-201ENSMUST00000034060 Secisbp2lQ6A098 1086 aaKnown RBP27.04■■□□□ 1.92
Sh3rf1-201ENSMUST00000034060 Brms1Q99N20 246 aa27.04■■□□□ 1.92
Sh3rf1-201ENSMUST00000034060 Terf2O35144 541 aa27.04■■□□□ 1.92
Sh3rf1-201ENSMUST00000034060 Cnnm1Q0GA42 951 aa27.04■■□□□ 1.92
Sh3rf1-201ENSMUST00000034060 Jade2Q6ZQF7 829 aa27.04■■□□□ 1.92
Sh3rf1-201ENSMUST00000034060 Anapc15-psA0A140T8L6 141 aa27.04■■□□□ 1.92
Sh3rf1-201ENSMUST00000034060 Strn4P58404 760 aa27.03■■□□□ 1.92
Sh3rf1-201ENSMUST00000034060 Tspyl3Q3UYP3 334 aa27.03■■□□□ 1.92
Sh3rf1-201ENSMUST00000034060 Igbp1bQ9QZ29 343 aa27.03■■□□□ 1.92
Sh3rf1-201ENSMUST00000034060 Iqgap2Q3UQ44 1575 aa27.03■■□□□ 1.92
Retrieved 100 of 22,080 RNA–protein pairs in 39 ms