RNA–Protein interactions for RNA: ENSMUST00000026045.13

Col17a1-201, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Col17a1, Length 5,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-201ENSMUST00000026045 Pmfbp1Q9WVQ0 1022 aa19.81■□□□□ 0.76
Col17a1-201ENSMUST00000026045 Ttc21bQ0HA38 1315 aa19.81■□□□□ 0.76
Col17a1-201ENSMUST00000026045 Thoc2B1AZI6 1594 aaKnown RBP19.81■□□□□ 0.76
Col17a1-201ENSMUST00000026045 TnmdQ9EP64 317 aa19.81■□□□□ 0.76
Col17a1-201ENSMUST00000026045 Gm1043A0A140LJC2 1431 aa19.81■□□□□ 0.76
Col17a1-201ENSMUST00000026045 Brd2Q7JJ13 798 aaKnown RBP19.81■□□□□ 0.76
Col17a1-201ENSMUST00000026045 Odf2A3KGV1 830 aaKnown RBP19.8■□□□□ 0.76
Col17a1-201ENSMUST00000026045 Mlh3A0A1Y7VMP7 1443 aa19.8■□□□□ 0.76
Col17a1-201ENSMUST00000026045 Cchcr1Q8K2I2 770 aa19.8■□□□□ 0.76
Col17a1-201ENSMUST00000026045 TatQ8QZR1 454 aa19.8■□□□□ 0.76
Col17a1-201ENSMUST00000026045 PalmQ9Z0P4 383 aa19.79■□□□□ 0.76
Col17a1-201ENSMUST00000026045 Babam1Q3UI43 333 aa19.79■□□□□ 0.76
Col17a1-201ENSMUST00000026045 Ccdc181Q80ZU5 509 aa19.79■□□□□ 0.76
Col17a1-201ENSMUST00000026045 AnlnQ8K298 1121 aaKnown RBP19.79■□□□□ 0.76
Col17a1-201ENSMUST00000026045 Neurod6P48986 337 aa19.79■□□□□ 0.76
Col17a1-201ENSMUST00000026045 Cog6Q8R3I3 657 aa19.79■□□□□ 0.76
Col17a1-201ENSMUST00000026045 Ddx11Q6AXC6 880 aa19.78■□□□□ 0.76
Col17a1-201ENSMUST00000026045 Smc4Q8CG47 1286 aa19.78■□□□□ 0.76
Col17a1-201ENSMUST00000026045 Pik3c2gO70167 1506 aa19.78■□□□□ 0.76
Col17a1-201ENSMUST00000026045 Med4Q9CQA5 270 aa19.78■□□□□ 0.76
Col17a1-201ENSMUST00000026045 Caskin1Q6P9K8 1431 aa19.78■□□□□ 0.76
Col17a1-201ENSMUST00000026045 Exoc8Q6PGF7 716 aa19.78■□□□□ 0.76
Col17a1-201ENSMUST00000026045 Tmx4Q8C0L0 335 aa19.78■□□□□ 0.76
Col17a1-201ENSMUST00000026045 Cfap58B2RW38 873 aa19.78■□□□□ 0.76
Col17a1-201ENSMUST00000026045 Kif2aP28740 705 aa19.77■□□□□ 0.76
Col17a1-201ENSMUST00000026045 Ppm1eQ80TL0 749 aa19.77■□□□□ 0.76
Col17a1-201ENSMUST00000026045 Ncoa3O09000 1398 aa19.77■□□□□ 0.76
Col17a1-201ENSMUST00000026045 Dync1i1O88485 628 aa19.77■□□□□ 0.76
Col17a1-201ENSMUST00000026045 BC005561E9Q5E2 1589 aa19.76■□□□□ 0.75
Col17a1-201ENSMUST00000026045 Rassf4Q8CB96 322 aa19.76■□□□□ 0.75
Col17a1-201ENSMUST00000026045 Gm21969J3QJZ1 289 aa19.76■□□□□ 0.75
Col17a1-201ENSMUST00000026045 Mcm2P97310 904 aa19.76■□□□□ 0.75
Col17a1-201ENSMUST00000026045 NexnQ7TPW1 607 aa19.76■□□□□ 0.75
Col17a1-201ENSMUST00000026045 Gm45140A0A0N4SUM8 220 aa19.76■□□□□ 0.75
Col17a1-201ENSMUST00000026045 Mphosph10Q810V0 681 aaKnown RBP19.76■□□□□ 0.75
Col17a1-201ENSMUST00000026045 Kif18aQ91WD7 886 aa19.76■□□□□ 0.75
Col17a1-201ENSMUST00000026045 Atxn3Q9CVD2 355 aa19.76■□□□□ 0.75
Col17a1-201ENSMUST00000026045 Stk3Q9JI10 497 aa19.76■□□□□ 0.75
Col17a1-201ENSMUST00000026045 Eif4g1Q6NZJ6 1600 aaKnown RBP19.75■□□□□ 0.75
Col17a1-201ENSMUST00000026045 Smc1bQ920F6 1248 aa19.75■□□□□ 0.75
Col17a1-201ENSMUST00000026045 Cdc37l1Q9CZP7 335 aa19.75■□□□□ 0.75
Col17a1-201ENSMUST00000026045 Q8C5K5 320 aa19.75■□□□□ 0.75
Col17a1-201ENSMUST00000026045 Gbp4Q61107 620 aa19.75■□□□□ 0.75
Col17a1-201ENSMUST00000026045 4931400O07RikQ9D4M5 137 aa19.75■□□□□ 0.75
Col17a1-201ENSMUST00000026045 HmmrQ00547 794 aaKnown RBP19.74■□□□□ 0.75
Col17a1-201ENSMUST00000026045 Jakmip2D3YXK0 820 aa19.74■□□□□ 0.75
Col17a1-201ENSMUST00000026045 Cplx1P63040 134 aa19.74■□□□□ 0.75
Col17a1-201ENSMUST00000026045 Erc2Q6PH08 957 aa19.74■□□□□ 0.75
Col17a1-201ENSMUST00000026045 Samm50Q8BGH2 469 aa19.74■□□□□ 0.75
Col17a1-201ENSMUST00000026045 Mctp1E9PV86 951 aa19.73■□□□□ 0.75
Col17a1-201ENSMUST00000026045 Slc52a2Q9D8F3 450 aa19.73■□□□□ 0.75
Col17a1-201ENSMUST00000026045 Uri1Q3TLD5 531 aa19.73■□□□□ 0.75
Col17a1-201ENSMUST00000026045 HypkQ9CR41 129 aa19.73■□□□□ 0.75
Col17a1-201ENSMUST00000026045 Iqca1Q9CUL5 857 aa19.73■□□□□ 0.75
Col17a1-201ENSMUST00000026045 FosbP13346 338 aa19.73■□□□□ 0.75
Col17a1-201ENSMUST00000026045 Nap1l1P28656 391 aaKnown RBP19.73■□□□□ 0.75
Col17a1-201ENSMUST00000026045 Trim25Q61510 634 aaKnown RBP19.73■□□□□ 0.75
Col17a1-201ENSMUST00000026045 Ccdc47Q9D024 483 aaKnown RBP19.73■□□□□ 0.75
Col17a1-201ENSMUST00000026045 Gm10471E9Q1C7 252 aa19.72■□□□□ 0.75
Col17a1-201ENSMUST00000026045 Zkscan2G3X952 960 aa19.72■□□□□ 0.75
Col17a1-201ENSMUST00000026045 Nucb2P81117 420 aa19.72■□□□□ 0.75
Col17a1-201ENSMUST00000026045 Nf2P46662 596 aa19.71■□□□□ 0.75
Col17a1-201ENSMUST00000026045 Zfp251Q6PCX8 632 aa19.71■□□□□ 0.75
Col17a1-201ENSMUST00000026045 Smc5Q8CG46 1101 aaKnown RBP19.71■□□□□ 0.75
Col17a1-201ENSMUST00000026045 Fam135aQ6NS59 1506 aa19.71■□□□□ 0.75
Col17a1-201ENSMUST00000026045 Maco1Q7TQE6 664 aaKnown RBP19.71■□□□□ 0.75
Col17a1-201ENSMUST00000026045 Egfem1Q8C088 590 aa19.71■□□□□ 0.75
Col17a1-201ENSMUST00000026045 ScaperF8VQ70 1398 aaKnown RBP19.71■□□□□ 0.75
Col17a1-201ENSMUST00000026045 Slu7Q8BHJ9 585 aa19.71■□□□□ 0.75
Col17a1-201ENSMUST00000026045 Grpel1Q99LP6 217 aa19.71■□□□□ 0.75
Col17a1-201ENSMUST00000026045 Adcy5P84309 1262 aa19.71■□□□□ 0.75
Col17a1-201ENSMUST00000026045 Cplx2P84086 134 aa19.7■□□□□ 0.74
Col17a1-201ENSMUST00000026045 ClasrpQ8CFC7 668 aa19.7■□□□□ 0.74
Col17a1-201ENSMUST00000026045 Cnnm3Q32NY4 713 aa19.7■□□□□ 0.74
Col17a1-201ENSMUST00000026045 Mnat1P51949 309 aa19.7■□□□□ 0.74
Col17a1-201ENSMUST00000026045 Ggnbp2Q5SV77 696 aa19.7■□□□□ 0.74
Col17a1-201ENSMUST00000026045 Evc2Q8K1G2 1220 aa19.69■□□□□ 0.74
Col17a1-201ENSMUST00000026045 Tfip11Q9ERA6 838 aaKnown RBP19.69■□□□□ 0.74
Col17a1-201ENSMUST00000026045 Gnai2P08752 355 aaKnown RBP19.69■□□□□ 0.74
Col17a1-201ENSMUST00000026045 Map4k4P97820 1233 aaKnown RBP19.69■□□□□ 0.74
Col17a1-201ENSMUST00000026045 Maats1Q8BRC6 783 aa19.69■□□□□ 0.74
Col17a1-201ENSMUST00000026045 SrrtQ99MR6 875 aaKnown RBP19.69■□□□□ 0.74
Col17a1-201ENSMUST00000026045 Nom1Q3UFM5 854 aaKnown RBP19.69■□□□□ 0.74
Col17a1-201ENSMUST00000026045 CenphQ9QYM8 241 aa19.69■□□□□ 0.74
Col17a1-201ENSMUST00000026045 Fchsd2Q3USJ8 740 aa19.69■□□□□ 0.74
Col17a1-201ENSMUST00000026045 Nup88Q8CEC0 753 aaKnown RBP19.69■□□□□ 0.74
Col17a1-201ENSMUST00000026045 IbtkQ6ZPR6 1352 aaKnown RBP19.68■□□□□ 0.74
Col17a1-201ENSMUST00000026045 Fkbp4P30416 458 aa19.68■□□□□ 0.74
Col17a1-201ENSMUST00000026045 Igf1rQ60751 1373 aa19.68■□□□□ 0.74
Col17a1-201ENSMUST00000026045 CenpqQ9CPQ5 267 aa19.68■□□□□ 0.74
Col17a1-201ENSMUST00000026045 Ccdc39Q9D5Y1 937 aa19.68■□□□□ 0.74
Col17a1-201ENSMUST00000026045 Nphp1Q9QY53 687 aa19.68■□□□□ 0.74
Col17a1-201ENSMUST00000026045 Dennd6aQ8BH65 605 aa19.68■□□□□ 0.74
Col17a1-201ENSMUST00000026045 Larp1bA0A0A6YXJ7 370 aaKnown RBP19.68■□□□□ 0.74
Col17a1-201ENSMUST00000026045 Necab1Q8BG18 352 aa19.68■□□□□ 0.74
Col17a1-201ENSMUST00000026045 Terf2O35144 541 aa19.67■□□□□ 0.74
Col17a1-201ENSMUST00000026045 Phldb2Q8K1N2 1249 aa19.67■□□□□ 0.74
Col17a1-201ENSMUST00000026045 Dnai2A2AC93 623 aa19.67■□□□□ 0.74
Col17a1-201ENSMUST00000026045 Lamb3Q61087 1168 aa19.67■□□□□ 0.74
Col17a1-201ENSMUST00000026045 HnrnpmQ9D0E1 729 aaKnown RBP19.67■□□□□ 0.74
Retrieved 100 of 22,080 RNA–protein pairs in 16.9 ms