RNA–Protein interactions for RNA: ENSMUST00000021043.4

Ccl1-201, Transcript of C-C motif chemokine 1, mousemouse

TSL 1 (best) BASIC

Gene Ccl1, Length 611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1-201ENSMUST00000021043 Ubap1lG3UW59 384 aa16.12■□□□□ 0.17
Ccl1-201ENSMUST00000021043 Zpr1Q62384 459 aa16.12■□□□□ 0.17
Ccl1-201ENSMUST00000021043 Rad17Q6NXW6 688 aa16.11■□□□□ 0.17
Ccl1-201ENSMUST00000021043 Uhrf1bp1lA2RSJ4 1457 aa16.1■□□□□ 0.17
Ccl1-201ENSMUST00000021043 Cacna1sQ02789 1880 aa16.1■□□□□ 0.17
Ccl1-201ENSMUST00000021043 Zranb3Q6NZP1 1069 aa16.1■□□□□ 0.17
Ccl1-201ENSMUST00000021043 Taok3Q8BYC6 898 aa16.1■□□□□ 0.17
Ccl1-201ENSMUST00000021043 TkfcQ8VC30 578 aa16.1■□□□□ 0.17
Ccl1-201ENSMUST00000021043 Slit1Q80TR4 1531 aa16.09■□□□□ 0.17
Ccl1-201ENSMUST00000021043 Cald1E9QA15 768 aaKnown RBP16.09■□□□□ 0.17
Ccl1-201ENSMUST00000021043 Kiaa0319Q5SZV5 1081 aa16.09■□□□□ 0.17
Ccl1-201ENSMUST00000021043 Col15a1O35206 1367 aa16.09■□□□□ 0.17
Ccl1-201ENSMUST00000021043 Nup153E9Q3G8 1462 aaKnown RBP16.08■□□□□ 0.16
Ccl1-201ENSMUST00000021043 Fer1l6E0CZ42 1862 aa16.08■□□□□ 0.16
Ccl1-201ENSMUST00000021043 Ankrd23Q812A3 306 aa16.07■□□□□ 0.16
Ccl1-201ENSMUST00000021043 Gm10471E9Q1C7 252 aa16.06■□□□□ 0.16
Ccl1-201ENSMUST00000021043 Trim28Q62318 834 aa16.06■□□□□ 0.16
Ccl1-201ENSMUST00000021043 Vps33bP59016 617 aa16.05■□□□□ 0.16
Ccl1-201ENSMUST00000021043 4930523C07RikE9Q2T4 99 aa16.04■□□□□ 0.16
Ccl1-201ENSMUST00000021043 Eif4a2P10630 407 aa16.04■□□□□ 0.16
Ccl1-201ENSMUST00000021043 Ddb1Q3U1J4 1140 aaKnown RBP16.04■□□□□ 0.16
Ccl1-201ENSMUST00000021043 Cc2d1aQ8K1A6 943 aa16.04■□□□□ 0.16
Ccl1-201ENSMUST00000021043 Ginm1Q91WR6 327 aa16.04■□□□□ 0.16
Ccl1-201ENSMUST00000021043 Ppp1r15aP17564 657 aa16.03■□□□□ 0.16
Ccl1-201ENSMUST00000021043 Sik1Q60670 779 aa16.03■□□□□ 0.16
Ccl1-201ENSMUST00000021043 Ptpn23Q6PB44 1692 aa16.02■□□□□ 0.16
Ccl1-201ENSMUST00000021043 Ccdc6D3YZP9 469 aa16.02■□□□□ 0.16
Ccl1-201ENSMUST00000021043 Eya1P97767 591 aa16.02■□□□□ 0.16
Ccl1-201ENSMUST00000021043 Aplp2Q06335 707 aa16.02■□□□□ 0.16
Ccl1-201ENSMUST00000021043 Ppp6r1Q7TSI3 856 aa16.02■□□□□ 0.16
Ccl1-201ENSMUST00000021043 Mast2Q60592 1734 aa16.02■□□□□ 0.15
Ccl1-201ENSMUST00000021043 PnisrA2AJT4 805 aaKnown RBP16.01■□□□□ 0.15
Ccl1-201ENSMUST00000021043 Exoc5Q3TPX4 708 aa16.01■□□□□ 0.15
Ccl1-201ENSMUST00000021043 Ppp2r1aQ76MZ3 589 aa16.01■□□□□ 0.15
Ccl1-201ENSMUST00000021043 Rsph6aQ8CDR2 708 aa16.01■□□□□ 0.15
Ccl1-201ENSMUST00000021043 Slc12a5Q91V14 1138 aa16■□□□□ 0.15
Ccl1-201ENSMUST00000021043 Fam50bQ9WTJ8 334 aa16■□□□□ 0.15
Ccl1-201ENSMUST00000021043 Mst1rQ62190 1378 aa16■□□□□ 0.15
Ccl1-201ENSMUST00000021043 GakQ99KY4 1305 aa15.99■□□□□ 0.15
Ccl1-201ENSMUST00000021043 Col22a1E9Q7P1 1613 aa15.99■□□□□ 0.15
Ccl1-201ENSMUST00000021043 Cypt1Q8CH20 168 aa15.99■□□□□ 0.15
Ccl1-201ENSMUST00000021043 Kdm6aO70546 1401 aa15.99■□□□□ 0.15
Ccl1-201ENSMUST00000021043 Akap11E9Q777 1895 aa15.99■□□□□ 0.15
Ccl1-201ENSMUST00000021043 FocadA2AKG8 1798 aa15.98■□□□□ 0.15
Ccl1-201ENSMUST00000021043 Tnks1bp1P58871 1720 aa15.98■□□□□ 0.15
Ccl1-201ENSMUST00000021043 MpripP97434 1024 aa15.98■□□□□ 0.15
Ccl1-201ENSMUST00000021043 Nwd2Q6P5U7 1742 aa15.98■□□□□ 0.15
Ccl1-201ENSMUST00000021043 Ppp1r37Q8BKR5 712 aa15.98■□□□□ 0.15
Ccl1-201ENSMUST00000021043 P2rx7Q9Z1M0 595 aa15.98■□□□□ 0.15
Ccl1-201ENSMUST00000021043 Kcnh4A2A5F7 1018 aa15.97■□□□□ 0.15
Ccl1-201ENSMUST00000021043 Nlrp6Q91WS2 869 aa15.97■□□□□ 0.15
Ccl1-201ENSMUST00000021043 Zcrb1Q9CZ96 217 aaKnown RBP15.97■□□□□ 0.15
Ccl1-201ENSMUST00000021043 Simc1E9Q6E9 1354 aa15.97■□□□□ 0.15
Ccl1-201ENSMUST00000021043 Rab3gap2Q8BMG7 1366 aa15.97■□□□□ 0.15
Ccl1-201ENSMUST00000021043 Elp1Q7TT37 1333 aaKnown RBP15.95■□□□□ 0.14
Ccl1-201ENSMUST00000021043 Ly75Q60767 1723 aa15.95■□□□□ 0.14
Ccl1-201ENSMUST00000021043 Gm21680A0A0G2JGR8 267 aa15.95■□□□□ 0.14
Ccl1-201ENSMUST00000021043 ThemisQ8BGW0 636 aa15.95■□□□□ 0.14
Ccl1-201ENSMUST00000021043 Kat6bQ8BRB7 1872 aa15.95■□□□□ 0.14
Ccl1-201ENSMUST00000021043 Parp14Q2EMV9 1817 aa15.94■□□□□ 0.14
Ccl1-201ENSMUST00000021043 4930572O03RikQ8C5Y0 211 aa15.94■□□□□ 0.14
Ccl1-201ENSMUST00000021043 Lrit1Q8K099 624 aa15.94■□□□□ 0.14
Ccl1-201ENSMUST00000021043 Speer4bQ9D9F7 267 aa15.94■□□□□ 0.14
Ccl1-201ENSMUST00000021043 Ppfibp2O35711 882 aa15.93■□□□□ 0.14
Ccl1-201ENSMUST00000021043 Plin1Q8CGN5 517 aa15.93■□□□□ 0.14
Ccl1-201ENSMUST00000021043 GalcP54818 684 aa15.92■□□□□ 0.14
Ccl1-201ENSMUST00000021043 Bsdc1Q80Y55 427 aa15.92■□□□□ 0.14
Ccl1-201ENSMUST00000021043 Anp32bQ9EST5 272 aaKnown RBP15.92■□□□□ 0.14
Ccl1-201ENSMUST00000021043 Adgrb1Q3UHD1 1582 aa15.92■□□□□ 0.14
Ccl1-201ENSMUST00000021043 Adamtsl1Q8BLI0 1745 aa15.91■□□□□ 0.14
Ccl1-201ENSMUST00000021043 Zfp777B9EKF4 885 aa15.91■□□□□ 0.14
Ccl1-201ENSMUST00000021043 PalmQ9Z0P4 383 aa15.91■□□□□ 0.14
Ccl1-201ENSMUST00000021043 Ildr2B5TVM2 661 aa15.9■□□□□ 0.14
Ccl1-201ENSMUST00000021043 Larp1bA0A0A6YXJ7 370 aaKnown RBP15.89■□□□□ 0.13
Ccl1-201ENSMUST00000021043 Tsen2Q6P7W5 460 aa15.89■□□□□ 0.13
Ccl1-201ENSMUST00000021043 Mcm10Q0VBD2 885 aa15.88■□□□□ 0.13
Ccl1-201ENSMUST00000021043 Gsdma3Q5Y4Y6 464 aa15.88■□□□□ 0.13
Ccl1-201ENSMUST00000021043 Larp1Q6ZQ58 1072 aaKnown RBP15.87■□□□□ 0.13
Ccl1-201ENSMUST00000021043 OscarQ8VBT3 265 aa15.87■□□□□ 0.13
Ccl1-201ENSMUST00000021043 GsdmaQ9EST1 446 aa15.87■□□□□ 0.13
Ccl1-201ENSMUST00000021043 TnikP83510 1323 aa15.87■□□□□ 0.13
Ccl1-201ENSMUST00000021043 Vars2Q3U2A8 1060 aa15.86■□□□□ 0.13
Ccl1-201ENSMUST00000021043 Q7TT23 1179 aa15.86■□□□□ 0.13
Ccl1-201ENSMUST00000021043 HypkQ9CR41 129 aa15.86■□□□□ 0.13
Ccl1-201ENSMUST00000021043 U2af1Q9D883 239 aaKnown RBP15.86■□□□□ 0.13
Ccl1-201ENSMUST00000021043 Kdm2bQ6P1G2 1309 aa15.86■□□□□ 0.13
Ccl1-201ENSMUST00000021043 Arhgap33Q80YF9 1305 aa15.86■□□□□ 0.13
Ccl1-201ENSMUST00000021043 Pnpla7A2AJ88 1352 aa15.86■□□□□ 0.13
Ccl1-201ENSMUST00000021043 Ahnak2E9PYB0 1738 aaKnown RBP15.85■□□□□ 0.13
Ccl1-201ENSMUST00000021043 Apba2P98084 750 aa15.85■□□□□ 0.13
Ccl1-201ENSMUST00000021043 Afg3l2Q8JZQ2 802 aaKnown RBP15.85■□□□□ 0.13
Ccl1-201ENSMUST00000021043 Rpgrip1lQ8CG73 1264 aa15.84■□□□□ 0.13
Ccl1-201ENSMUST00000021043 Erbb3Q61526 1339 aa15.84■□□□□ 0.13
Ccl1-201ENSMUST00000021043 Gm21663A0A0G2JE01 267 aa15.83■□□□□ 0.12
Ccl1-201ENSMUST00000021043 Gm7361D3Z6R1 267 aa15.83■□□□□ 0.12
Ccl1-201ENSMUST00000021043 5031410I06RikE9Q4E0 267 aa15.83■□□□□ 0.12
Ccl1-201ENSMUST00000021043 Gm1979E9QAN3 267 aa15.83■□□□□ 0.12
Ccl1-201ENSMUST00000021043 Gm5862K7N5V5 267 aa15.83■□□□□ 0.12
Ccl1-201ENSMUST00000021043 Gm10220K7N660 267 aa15.83■□□□□ 0.12
Ccl1-201ENSMUST00000021043 Wwc2Q6NXJ0 1187 aa15.83■□□□□ 0.12
Retrieved 100 of 22,080 RNA–protein pairs in 25.3 ms