RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Abcf1Q6P542 837 aaKnown RBP10.75□□□□□ -0.69
Ccdc47-201ENSMUST00000002043 Smarca2Q6DIC0 1577 aa10.75□□□□□ -0.69
Ccdc47-201ENSMUST00000002043 Ctage5Q8R311 779 aa10.75□□□□□ -0.69
Ccdc47-201ENSMUST00000002043 Ecm2Q5FW85 670 aa10.75□□□□□ -0.69
Ccdc47-201ENSMUST00000002043 Ddx19aQ61655 478 aaKnown RBP10.75□□□□□ -0.69
Ccdc47-201ENSMUST00000002043 4930572O03RikQ8C5Y0 211 aa10.75□□□□□ -0.69
Ccdc47-201ENSMUST00000002043 Kif18aQ91WD7 886 aa10.75□□□□□ -0.69
Ccdc47-201ENSMUST00000002043 CenphQ9QYM8 241 aa10.75□□□□□ -0.69
Ccdc47-201ENSMUST00000002043 Cd109Q8R422 1442 aa10.75□□□□□ -0.69
Ccdc47-201ENSMUST00000002043 Cct4P80315 539 aaKnown RBP10.74□□□□□ -0.69
Ccdc47-201ENSMUST00000002043 Zfp444Q3TDV8 331 aaKnown RBP10.74□□□□□ -0.69
Ccdc47-201ENSMUST00000002043 Tspyl3Q3UYP3 334 aa10.74□□□□□ -0.69
Ccdc47-201ENSMUST00000002043 Flad1Q8R123 492 aa10.74□□□□□ -0.69
Ccdc47-201ENSMUST00000002043 Trim34aQ99PP6 485 aa10.74□□□□□ -0.69
Ccdc47-201ENSMUST00000002043 Trim11Q99PQ2 467 aa10.74□□□□□ -0.69
Ccdc47-201ENSMUST00000002043 Mctp1E9PV86 951 aa10.74□□□□□ -0.69
Ccdc47-201ENSMUST00000002043 Lamb3Q61087 1168 aa10.74□□□□□ -0.69
Ccdc47-201ENSMUST00000002043 Fam163aQ8CAA5 168 aa10.74□□□□□ -0.69
Ccdc47-201ENSMUST00000002043 Ccdc39Q9D5Y1 937 aa10.74□□□□□ -0.69
Ccdc47-201ENSMUST00000002043 ImpactO55091 318 aa10.74□□□□□ -0.69
Ccdc47-201ENSMUST00000002043 Cnnm1Q0GA42 951 aa10.74□□□□□ -0.69
Ccdc47-201ENSMUST00000002043 ItpripQ3TNL8 555 aa10.74□□□□□ -0.69
Ccdc47-201ENSMUST00000002043 Mctp2Q5RJH2 878 aa10.74□□□□□ -0.69
Ccdc47-201ENSMUST00000002043 Rufy2Q8R4C2 606 aa10.74□□□□□ -0.69
Ccdc47-201ENSMUST00000002043 Nectin2P32507 530 aa10.73□□□□□ -0.69
Ccdc47-201ENSMUST00000002043 Cers3Q1A3B0 383 aa10.73□□□□□ -0.69
Ccdc47-201ENSMUST00000002043 Olr1Q9EQ09 363 aa10.73□□□□□ -0.69
Ccdc47-201ENSMUST00000002043 Zranb3Q6NZP1 1069 aa10.73□□□□□ -0.69
Ccdc47-201ENSMUST00000002043 Tubb4aQ9D6F9 444 aa10.73□□□□□ -0.69
Ccdc47-201ENSMUST00000002043 Stk3Q9JI10 497 aa10.73□□□□□ -0.69
Ccdc47-201ENSMUST00000002043 Zeb2Q9R0G7 1215 aa10.73□□□□□ -0.69
Ccdc47-201ENSMUST00000002043 Smarca4Q3TKT4 1613 aaKnown RBP10.73□□□□□ -0.69
Ccdc47-201ENSMUST00000002043 Jakmip1Q8BVL9 626 aa10.73□□□□□ -0.69
Ccdc47-201ENSMUST00000002043 Fsd2Q8BZ52 692 aa10.73□□□□□ -0.69
Ccdc47-201ENSMUST00000002043 StambpQ9CQ26 424 aa10.73□□□□□ -0.69
Ccdc47-201ENSMUST00000002043 Pdcl2Q78Y63 240 aa10.73□□□□□ -0.69
Ccdc47-201ENSMUST00000002043 Gm21671G3UY31 267 aa10.72□□□□□ -0.69
Ccdc47-201ENSMUST00000002043 Ccdc191J3QQ27 883 aa10.72□□□□□ -0.69
Ccdc47-201ENSMUST00000002043 BcanQ61361 883 aa10.72□□□□□ -0.69
Ccdc47-201ENSMUST00000002043 Nol12Q8BG17 217 aa10.72□□□□□ -0.69
Ccdc47-201ENSMUST00000002043 Slu7Q8BHJ9 585 aa10.72□□□□□ -0.69
Ccdc47-201ENSMUST00000002043 Spata24Q6P926 205 aa10.72□□□□□ -0.69
Ccdc47-201ENSMUST00000002043 Fez2Q6TYB5 348 aa10.72□□□□□ -0.69
Ccdc47-201ENSMUST00000002043 Il16O54824 1322 aa10.72□□□□□ -0.69
Ccdc47-201ENSMUST00000002043 Kdm2bQ6P1G2 1309 aa10.72□□□□□ -0.69
Ccdc47-201ENSMUST00000002043 Trap1aP19473 224 aa10.72□□□□□ -0.69
Ccdc47-201ENSMUST00000002043 DesP31001 469 aaKnown RBP10.72□□□□□ -0.69
Ccdc47-201ENSMUST00000002043 Clul1Q3ZRW6 464 aa10.72□□□□□ -0.69
Ccdc47-201ENSMUST00000002043 Ppip5k2Q6ZQB6 1129 aa10.72□□□□□ -0.69
Ccdc47-201ENSMUST00000002043 Fsd1Q7TPM6 496 aa10.72□□□□□ -0.69
Ccdc47-201ENSMUST00000002043 Tubb4bP68372 445 aaKnown RBP10.72□□□□□ -0.69
Ccdc47-201ENSMUST00000002043 Ccar2Q8VDP4 922 aaKnown RBP10.72□□□□□ -0.69
Ccdc47-201ENSMUST00000002043 Cetn1P41209 172 aa10.71□□□□□ -0.69
Ccdc47-201ENSMUST00000002043 MvpQ9EQK5 861 aa10.71□□□□□ -0.69
Ccdc47-201ENSMUST00000002043 IncenpQ9WU62 880 aa10.71□□□□□ -0.69
Ccdc47-201ENSMUST00000002043 Cttnbp2B9EJA2 1648 aa10.71□□□□□ -0.69
Ccdc47-201ENSMUST00000002043 Abl1P00520 1123 aa10.71□□□□□ -0.69
Ccdc47-201ENSMUST00000002043 Arhgef18Q6P9R4 1021 aa10.71□□□□□ -0.69
Ccdc47-201ENSMUST00000002043 Erlin1Q91X78 346 aa10.71□□□□□ -0.69
Ccdc47-201ENSMUST00000002043 Nol7Q9D7Z3 254 aaKnown RBP10.71□□□□□ -0.69
Ccdc47-201ENSMUST00000002043 Strn4P58404 760 aa10.71□□□□□ -0.69
Ccdc47-201ENSMUST00000002043 Ccdc150Q8CDI7 1110 aa10.71□□□□□ -0.69
Ccdc47-201ENSMUST00000002043 Irgm2A0A140LIF8 407 aa10.71□□□□□ -0.7
Ccdc47-201ENSMUST00000002043 FosbP13346 338 aa10.71□□□□□ -0.7
Ccdc47-201ENSMUST00000002043 Ssh1Q76I79 1042 aa10.71□□□□□ -0.7
Ccdc47-201ENSMUST00000002043 Naa15Q80UM3 865 aaKnown RBP10.71□□□□□ -0.7
Ccdc47-201ENSMUST00000002043 Ccdc181Q80ZU5 509 aa10.71□□□□□ -0.7
Ccdc47-201ENSMUST00000002043 Smco2Q9DA21 347 aa10.71□□□□□ -0.7
Ccdc47-201ENSMUST00000002043 Akap2O54931 893 aa10.71□□□□□ -0.7
Ccdc47-201ENSMUST00000002043 Dusp27Q148W8 1138 aa10.71□□□□□ -0.7
Ccdc47-201ENSMUST00000002043 Lrrfip2Q91WK0 415 aa10.71□□□□□ -0.7
Ccdc47-201ENSMUST00000002043 CarsQ9ER72 831 aaKnown RBP10.71□□□□□ -0.7
Ccdc47-201ENSMUST00000002043 Fam43aQ8BUP8 424 aa10.7□□□□□ -0.7
Ccdc47-201ENSMUST00000002043 Rbm5Q91YE7 815 aaKnown RBP10.7□□□□□ -0.7
Ccdc47-201ENSMUST00000002043 Cwc27Q3TKY6 469 aa10.7□□□□□ -0.7
Ccdc47-201ENSMUST00000002043 Q9D9H8 365 aa10.7□□□□□ -0.7
Ccdc47-201ENSMUST00000002043 Gm44503E9PYU5 387 aa10.7□□□□□ -0.7
Ccdc47-201ENSMUST00000002043 Map4k4P97820 1233 aaKnown RBP10.7□□□□□ -0.7
Ccdc47-201ENSMUST00000002043 Rbm27Q5SFM8 1060 aaKnown RBP10.7□□□□□ -0.7
Ccdc47-201ENSMUST00000002043 Shroom4Q1W617 1475 aa10.7□□□□□ -0.7
Ccdc47-201ENSMUST00000002043 Nol8Q3UHX0 1147 aaKnown RBP10.7□□□□□ -0.7
Ccdc47-201ENSMUST00000002043 Smc1aQ9CU62 1233 aaKnown RBP10.7□□□□□ -0.7
Ccdc47-201ENSMUST00000002043 Slc4a2P13808 1237 aaKnown RBP10.69□□□□□ -0.7
Ccdc47-201ENSMUST00000002043 Paxbp1P58501 919 aa10.69□□□□□ -0.7
Ccdc47-201ENSMUST00000002043 Srgap3Q812A2 1099 aa10.69□□□□□ -0.7
Ccdc47-201ENSMUST00000002043 Eif3bQ8JZQ9 803 aaKnown RBP10.69□□□□□ -0.7
Ccdc47-201ENSMUST00000002043 Rsph6aQ8CDR2 708 aa10.69□□□□□ -0.7
Ccdc47-201ENSMUST00000002043 Cog6Q8R3I3 657 aa10.69□□□□□ -0.7
Ccdc47-201ENSMUST00000002043 Tsg101Q61187 391 aa10.69□□□□□ -0.7
Ccdc47-201ENSMUST00000002043 Bms1Q6PGF5 1284 aaKnown RBP10.69□□□□□ -0.7
Ccdc47-201ENSMUST00000002043 Aldh1l1Q8R0Y6 902 aa10.68□□□□□ -0.7
Ccdc47-201ENSMUST00000002043 Gnl2Q99LH1 728 aaKnown RBP10.68□□□□□ -0.7
Ccdc47-201ENSMUST00000002043 Jade2Q6ZQF7 829 aa10.68□□□□□ -0.7
Ccdc47-201ENSMUST00000002043 Tmc1Q8R4P5 757 aa10.68□□□□□ -0.7
Ccdc47-201ENSMUST00000002043 Fam13aQ8BGI4 693 aa10.68□□□□□ -0.7
Ccdc47-201ENSMUST00000002043 Rnf41Q8BH75 317 aa10.68□□□□□ -0.7
Ccdc47-201ENSMUST00000002043 Calml4Q91WQ9 153 aa10.68□□□□□ -0.7
Ccdc47-201ENSMUST00000002043 Synj1Q8CHC4 1574 aa10.68□□□□□ -0.7
Ccdc47-201ENSMUST00000002043 Rapgef4Q9EQZ6 1011 aa10.68□□□□□ -0.7
Ccdc47-201ENSMUST00000002043 Jakmip3Q5DTN8 844 aa10.67□□□□□ -0.7
Retrieved 100 of 22,080 RNA–protein pairs in 23.5 ms