RNA–Protein interactions for RNA: ENST00000619035.4

TNFAIP3-209, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-209ENST00000619035 ZNF197O14709 1029 aa12.81□□□□□ -0.36
TNFAIP3-209ENST00000619035 ZMPSTE24O75844 475 aa12.81□□□□□ -0.36
TNFAIP3-209ENST00000619035 CD160O95971 181 aa12.81□□□□□ -0.36
TNFAIP3-209ENST00000619035 ALDOAP04075 364 aaKnown RBP12.81□□□□□ -0.36
TNFAIP3-209ENST00000619035 ALADP13716 330 aa12.81□□□□□ -0.36
TNFAIP3-209ENST00000619035 CES1P23141 567 aa12.81□□□□□ -0.36
TNFAIP3-209ENST00000619035 SPRP35270 261 aaPredicted RBP12.81□□□□□ -0.36
TNFAIP3-209ENST00000619035 SERPINB4P48594 390 aa12.81□□□□□ -0.36
TNFAIP3-209ENST00000619035 RHOAP61586 193 aa12.81□□□□□ -0.36
TNFAIP3-209ENST00000619035 RAB30Q15771 203 aa12.81□□□□□ -0.36
TNFAIP3-209ENST00000619035 CES4AQ5XG92 561 aa12.81□□□□□ -0.36
TNFAIP3-209ENST00000619035 ALG1LQ6GMV1 187 aa12.81□□□□□ -0.36
TNFAIP3-209ENST00000619035 C16orf46Q6P387 395 aa12.81□□□□□ -0.36
TNFAIP3-209ENST00000619035 KIAA1958Q8N8K9 716 aa12.81□□□□□ -0.36
TNFAIP3-209ENST00000619035 RFWD2Q8NHY2 731 aa12.81□□□□□ -0.36
TNFAIP3-209ENST00000619035 GDPD5Q8WTR4 605 aa12.81□□□□□ -0.36
TNFAIP3-209ENST00000619035 PDCD6IPQ8WUM4 868 aaKnown RBP12.81□□□□□ -0.36
TNFAIP3-209ENST00000619035 FEM1CQ96JP0 617 aa12.81□□□□□ -0.36
TNFAIP3-209ENST00000619035 NSMCE3Q96MG7 304 aa12.81□□□□□ -0.36
TNFAIP3-209ENST00000619035 ZSWIM3Q96MP5 696 aa12.81□□□□□ -0.36
TNFAIP3-209ENST00000619035 PRKD2Q9BZL6 878 aa12.81□□□□□ -0.36
TNFAIP3-209ENST00000619035 ZNF395Q9H8N7 513 aaPredicted RBP12.81□□□□□ -0.36
TNFAIP3-209ENST00000619035 MRM3Q9HC36 420 aaKnown RBP12.81□□□□□ -0.36
TNFAIP3-209ENST00000619035 PLLPQ9Y342 182 aa12.81□□□□□ -0.36
TNFAIP3-209ENST00000619035 OR51B4Q9Y5P0 310 aa12.81□□□□□ -0.36
TNFAIP3-209ENST00000619035 K7ERQ8 282 aa12.8□□□□□ -0.36
TNFAIP3-209ENST00000619035 CCL22O00626 93 aa12.8□□□□□ -0.36
TNFAIP3-209ENST00000619035 BUD23O43709 281 aaKnown RBP12.8□□□□□ -0.36
TNFAIP3-209ENST00000619035 MT-CO1P00395 513 aa12.8□□□□□ -0.36
TNFAIP3-209ENST00000619035 TCF3P15923 654 aa12.8□□□□□ -0.36
TNFAIP3-209ENST00000619035 CEBPBP17676 345 aa12.8□□□□□ -0.36
TNFAIP3-209ENST00000619035 HLA-DPA1P20036 260 aa12.8□□□□□ -0.36
TNFAIP3-209ENST00000619035 ARNTP27540 789 aa12.8□□□□□ -0.36
TNFAIP3-209ENST00000619035 CD70P32970 193 aa12.8□□□□□ -0.36
TNFAIP3-209ENST00000619035 NRIP1P48552 1158 aa12.8□□□□□ -0.36
TNFAIP3-209ENST00000619035 LIMK2P53671 638 aa12.8□□□□□ -0.36
TNFAIP3-209ENST00000619035 LMAN2Q12907 356 aa12.8□□□□□ -0.36
TNFAIP3-209ENST00000619035 CTBP1Q13363 440 aa12.8□□□□□ -0.36
TNFAIP3-209ENST00000619035 THOC5Q13769 683 aaKnown RBP12.8□□□□□ -0.36
TNFAIP3-209ENST00000619035 TMC5Q6UXY8 1006 aa12.8□□□□□ -0.36
TNFAIP3-209ENST00000619035 CMC1Q7Z7K0 106 aa12.8□□□□□ -0.36
TNFAIP3-209ENST00000619035 DENND6AQ8IWF6 608 aa12.8□□□□□ -0.36
TNFAIP3-209ENST00000619035 DCAF4L2Q8NA75 395 aa12.8□□□□□ -0.36
TNFAIP3-209ENST00000619035 RMDN1Q96DB5 314 aa12.8□□□□□ -0.36
TNFAIP3-209ENST00000619035 C2orf49Q9BVC5 232 aaPredicted RBP12.8□□□□□ -0.36
TNFAIP3-209ENST00000619035 VPS11Q9H270 941 aa12.8□□□□□ -0.36
TNFAIP3-209ENST00000619035 TLE6Q9H808 572 aa12.8□□□□□ -0.36
TNFAIP3-209ENST00000619035 ACTR5Q9H9F9 607 aaPredicted RBP12.8□□□□□ -0.36
TNFAIP3-209ENST00000619035 TREX1Q9NSU2 369 aa12.8□□□□□ -0.36
TNFAIP3-209ENST00000619035 SLC12A4Q9UP95 1085 aa12.8□□□□□ -0.36
TNFAIP3-209ENST00000619035 TRIM33Q9UPN9 1127 aa12.8□□□□□ -0.36
TNFAIP3-209ENST00000619035 PCDHGC4Q9Y5F7 938 aa12.8□□□□□ -0.36
TNFAIP3-209ENST00000619035 NEDD8-MDP1E9PL57 170 aa12.79□□□□□ -0.36
TNFAIP3-209ENST00000619035 SLC4A1P02730 911 aa12.79□□□□□ -0.36
TNFAIP3-209ENST00000619035 FGF1P05230 155 aa12.79□□□□□ -0.36
TNFAIP3-209ENST00000619035 SAT1P21673 171 aa12.79□□□□□ -0.36
TNFAIP3-209ENST00000619035 TYK2P29597 1187 aa12.79□□□□□ -0.36
TNFAIP3-209ENST00000619035 CCNFP41002 786 aa12.79□□□□□ -0.36
TNFAIP3-209ENST00000619035 ARCN1P48444 511 aaKnown RBP12.79□□□□□ -0.36
TNFAIP3-209ENST00000619035 PPM1JQ5JR12 505 aa12.79□□□□□ -0.36
TNFAIP3-209ENST00000619035 ATXN7L2Q5T6C5 722 aaPredicted RBP12.79□□□□□ -0.36
TNFAIP3-209ENST00000619035 TSTD2Q5T7W7 516 aa12.79□□□□□ -0.36
TNFAIP3-209ENST00000619035 ZNF470Q6ECI4 717 aa12.79□□□□□ -0.36
TNFAIP3-209ENST00000619035 FSTL4Q6MZW2 842 aa12.79□□□□□ -0.36
TNFAIP3-209ENST00000619035 TMEM25Q86YD3 366 aa12.79□□□□□ -0.36
TNFAIP3-209ENST00000619035 DCLK2Q8N568 766 aa12.79□□□□□ -0.36
TNFAIP3-209ENST00000619035 ZNF707Q96C28 371 aaPredicted RBP12.79□□□□□ -0.36
TNFAIP3-209ENST00000619035 ALG14Q96F25 216 aa12.79□□□□□ -0.36
TNFAIP3-209ENST00000619035 TM6SF2Q9BZW4 377 aa12.79□□□□□ -0.36
TNFAIP3-209ENST00000619035 NKX2-4Q9H2Z4 354 aa12.79□□□□□ -0.36
TNFAIP3-209ENST00000619035 CAB39LQ9H9S4 337 aa12.79□□□□□ -0.36
TNFAIP3-209ENST00000619035 MTO1Q9Y2Z2 717 aaKnown RBP12.79□□□□□ -0.36
TNFAIP3-209ENST00000619035 MRPS23Q9Y3D9 190 aaKnown RBP12.79□□□□□ -0.36
TNFAIP3-209ENST00000619035 KCTD3Q9Y597 815 aa12.79□□□□□ -0.36
TNFAIP3-209ENST00000619035 CEP290O15078 2479 aa12.79□□□□□ -0.36
TNFAIP3-209ENST00000619035 CR2P20023 1033 aa12.79□□□□□ -0.36
TNFAIP3-209ENST00000619035 PGGT1BP53609 377 aa12.79□□□□□ -0.36
TNFAIP3-209ENST00000619035 TMPRSS15P98073 1019 aa12.79□□□□□ -0.36
TNFAIP3-209ENST00000619035 MPP1Q00013 466 aa12.79□□□□□ -0.36
TNFAIP3-209ENST00000619035 PRSS36Q5K4E3 855 aa12.79□□□□□ -0.36
TNFAIP3-209ENST00000619035 FYB2Q5VWT5 728 aa12.79□□□□□ -0.36
TNFAIP3-209ENST00000619035 PPP2R2DQ66LE6 453 aa12.79□□□□□ -0.36
TNFAIP3-209ENST00000619035 RNF43Q68DV7 783 aa12.79□□□□□ -0.36
TNFAIP3-209ENST00000619035 KIAA0930Q6ICG6 404 aaPredicted RBP12.79□□□□□ -0.36
TNFAIP3-209ENST00000619035 TIFABQ6ZNK6 161 aa12.79□□□□□ -0.36
TNFAIP3-209ENST00000619035 LPCAT1Q8NF37 534 aa12.79□□□□□ -0.36
TNFAIP3-209ENST00000619035 OR6K2Q8NGY2 324 aa12.79□□□□□ -0.36
TNFAIP3-209ENST00000619035 C10orf82Q8WW14 230 aa12.79□□□□□ -0.36
TNFAIP3-209ENST00000619035 SMG7Q92540 1137 aaKnown RBP12.79□□□□□ -0.36
TNFAIP3-209ENST00000619035 GRAMD1AQ96CP6 724 aa12.79□□□□□ -0.36
TNFAIP3-209ENST00000619035 VPS39Q96JC1 886 aa12.79□□□□□ -0.36
TNFAIP3-209ENST00000619035 NUDCD1Q96RS6 583 aa12.79□□□□□ -0.36
TNFAIP3-209ENST00000619035 CDCA3Q99618 268 aaPredicted RBP12.79□□□□□ -0.36
TNFAIP3-209ENST00000619035 PBX4Q9BYU1 374 aa12.79□□□□□ -0.36
TNFAIP3-209ENST00000619035 MYLK2Q9H1R3 596 aa12.79□□□□□ -0.36
TNFAIP3-209ENST00000619035 ABCB8Q9NUT2 735 aa12.79□□□□□ -0.36
TNFAIP3-209ENST00000619035 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.79□□□□□ -0.36
TNFAIP3-209ENST00000619035 KIAA1522Q9P206 1035 aaPredicted RBP12.79□□□□□ -0.36
TNFAIP3-209ENST00000619035 LHX3Q9UBR4 397 aa12.79□□□□□ -0.36
TNFAIP3-209ENST00000619035 MSRAQ9UJ68 235 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms