RNA–Protein interactions for RNA: ENST00000617539.1

NEDD4L-237, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene NEDD4L, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-237ENST00000617539 CWC15Q9P013 229 aaKnown RBP22.44■■□□□ 1.18
NEDD4L-237ENST00000617539 MYO1AQ9UBC5 1043 aa22.44■■□□□ 1.18
NEDD4L-237ENST00000617539 CLCA2Q9UQC9 943 aa22.44■■□□□ 1.18
NEDD4L-237ENST00000617539 COQ6Q9Y2Z9 468 aa22.44■■□□□ 1.18
NEDD4L-237ENST00000617539 SCINQ9Y6U3 715 aa22.44■■□□□ 1.18
NEDD4L-237ENST00000617539 NEMP2A6NFY4 417 aa22.43■■□□□ 1.18
NEDD4L-237ENST00000617539 ARHGAP42A6NI28 874 aa22.43■■□□□ 1.18
NEDD4L-237ENST00000617539 PRPSAP2O60256 369 aa22.43■■□□□ 1.18
NEDD4L-237ENST00000617539 ALPPL2P10696 532 aa22.43■■□□□ 1.18
NEDD4L-237ENST00000617539 JUNDP17535 347 aa22.43■■□□□ 1.18
NEDD4L-237ENST00000617539 RTP5Q14D33 572 aa22.43■■□□□ 1.18
NEDD4L-237ENST00000617539 IRF4Q15306 451 aa22.43■■□□□ 1.18
NEDD4L-237ENST00000617539 UGP2Q16851 508 aa22.43■■□□□ 1.18
NEDD4L-237ENST00000617539 HS1BP3Q53T59 392 aa22.43■■□□□ 1.18
NEDD4L-237ENST00000617539 CAMK1DQ8IU85 385 aa22.43■■□□□ 1.18
NEDD4L-237ENST00000617539 HCAR2Q8TDS4 363 aa22.43■■□□□ 1.18
NEDD4L-237ENST00000617539 NSMCE3Q96MG7 304 aa22.43■■□□□ 1.18
NEDD4L-237ENST00000617539 NRSN2Q9GZP1 204 aa22.43■■□□□ 1.18
NEDD4L-237ENST00000617539 SCUBE2Q9NQ36 999 aa22.43■■□□□ 1.18
NEDD4L-237ENST00000617539 IPO11Q9UI26 975 aaKnown RBP22.43■■□□□ 1.18
NEDD4L-237ENST00000617539 CSNK1G3Q9Y6M4 447 aa22.43■■□□□ 1.18
NEDD4L-237ENST00000617539 ASXL3Q9C0F0 2248 aa22.42■■□□□ 1.18
NEDD4L-237ENST00000617539 A0A087WV48 116 aa22.42■■□□□ 1.18
NEDD4L-237ENST00000617539 H3BM21 787 aa22.42■■□□□ 1.18
NEDD4L-237ENST00000617539 MUSKO15146 869 aa22.42■■□□□ 1.18
NEDD4L-237ENST00000617539 AQP9O43315 295 aa22.42■■□□□ 1.18
NEDD4L-237ENST00000617539 PRKCGP05129 697 aa22.42■■□□□ 1.18
NEDD4L-237ENST00000617539 HCAR3P49019 387 aa22.42■■□□□ 1.18
NEDD4L-237ENST00000617539 SUOXP51687 545 aa22.42■■□□□ 1.18
NEDD4L-237ENST00000617539 FANCCQ00597 558 aa22.42■■□□□ 1.18
NEDD4L-237ENST00000617539 E2F1Q01094 437 aa22.42■■□□□ 1.18
NEDD4L-237ENST00000617539 SEMG2Q02383 582 aa22.42■■□□□ 1.18
NEDD4L-237ENST00000617539 CDCP2Q5VXM1 449 aa22.42■■□□□ 1.18
NEDD4L-237ENST00000617539 TRIM11Q96F44 468 aa22.42■■□□□ 1.18
NEDD4L-237ENST00000617539 ZNF641Q96N77 438 aaPredicted RBP22.42■■□□□ 1.18
NEDD4L-237ENST00000617539 DUSP23Q9BVJ7 150 aa22.42■■□□□ 1.18
NEDD4L-237ENST00000617539 BPTFQ12830 3046 aa22.41■■□□□ 1.18
NEDD4L-237ENST00000617539 DFFAO00273 331 aa22.41■■□□□ 1.18
NEDD4L-237ENST00000617539 RIOK3O14730 519 aaKnown RBP22.41■■□□□ 1.18
NEDD4L-237ENST00000617539 DAPK3O43293 454 aa22.41■■□□□ 1.18
NEDD4L-237ENST00000617539 TLX3O43711 291 aaPredicted RBP22.41■■□□□ 1.18
NEDD4L-237ENST00000617539 OPA1O60313 960 aa22.41■■□□□ 1.18
NEDD4L-237ENST00000617539 GCATO75600 419 aa22.41■■□□□ 1.18
NEDD4L-237ENST00000617539 PALMO75781 387 aa22.41■■□□□ 1.18
NEDD4L-237ENST00000617539 MYBL1P10243 752 aa22.41■■□□□ 1.18
NEDD4L-237ENST00000617539 C6P13671 934 aa22.41■■□□□ 1.18
NEDD4L-237ENST00000617539 PCK1P35558 622 aa22.41■■□□□ 1.18
NEDD4L-237ENST00000617539 MMP12P39900 470 aa22.41■■□□□ 1.18
NEDD4L-237ENST00000617539 CSNK1DP48730 415 aa22.41■■□□□ 1.18
NEDD4L-237ENST00000617539 THOP1P52888 689 aa22.41■■□□□ 1.18
NEDD4L-237ENST00000617539 YPEL5P62699 121 aa22.41■■□□□ 1.18
NEDD4L-237ENST00000617539 ELP6Q0PNE2 266 aa22.41■■□□□ 1.18
NEDD4L-237ENST00000617539 GRM3Q14832 879 aa22.41■■□□□ 1.18
NEDD4L-237ENST00000617539 SMTNL2Q2TAL5 461 aa22.41■■□□□ 1.18
NEDD4L-237ENST00000617539 WSCD2Q2TBF2 565 aa22.41■■□□□ 1.18
NEDD4L-237ENST00000617539 DEFB133Q30KQ1 61 aa22.41■■□□□ 1.18
NEDD4L-237ENST00000617539 ZCCHC8Q6NZY4 707 aaKnown RBP22.41■■□□□ 1.18
NEDD4L-237ENST00000617539 MACC1Q6ZN28 852 aa22.41■■□□□ 1.18
NEDD4L-237ENST00000617539 NYAP1Q6ZVC0 841 aa22.41■■□□□ 1.18
NEDD4L-237ENST00000617539 SRLQ86TD4 932 aa22.41■■□□□ 1.18
NEDD4L-237ENST00000617539 LMX1AQ8TE12 382 aa22.41■■□□□ 1.18
NEDD4L-237ENST00000617539 TUBGCP5Q96RT8 1024 aa22.41■■□□□ 1.18
NEDD4L-237ENST00000617539 LRRC61Q9BV99 259 aa22.41■■□□□ 1.18
NEDD4L-237ENST00000617539 C1QTNF7Q9BXJ2 289 aa22.41■■□□□ 1.18
NEDD4L-237ENST00000617539 APOBEC3BQ9UH17 382 aaKnown RBP22.41■■□□□ 1.18
NEDD4L-237ENST00000617539 A0A1W2PQJ5 194 aa22.4■■□□□ 1.18
NEDD4L-237ENST00000617539 MT-CO3P00414 261 aa22.4■■□□□ 1.18
NEDD4L-237ENST00000617539 GP1BAP07359 652 aa22.4■■□□□ 1.18
NEDD4L-237ENST00000617539 XPAP23025 273 aaPredicted RBP22.4■■□□□ 1.18
NEDD4L-237ENST00000617539 EIF4A3P38919 411 aaKnown RBP22.4■■□□□ 1.18
NEDD4L-237ENST00000617539 IL10RBQ08334 325 aa22.4■■□□□ 1.18
NEDD4L-237ENST00000617539 DPYSL2Q16555 572 aa22.4■■□□□ 1.18
NEDD4L-237ENST00000617539 TXNRD3NBQ6F5E7 133 aa22.4■■□□□ 1.18
NEDD4L-237ENST00000617539 BRAT1Q6PJG6 821 aa22.4■■□□□ 1.18
NEDD4L-237ENST00000617539 PHACTR4Q8IZ21 702 aa22.4■■□□□ 1.18
NEDD4L-237ENST00000617539 ECHDC3Q96DC8 303 aa22.4■■□□□ 1.18
NEDD4L-237ENST00000617539 THAP2Q9H0W7 228 aa22.4■■□□□ 1.18
NEDD4L-237ENST00000617539 SP110Q9HB58 689 aa22.4■■□□□ 1.18
NEDD4L-237ENST00000617539 MRPL47Q9HD33 250 aaKnown RBP22.4■■□□□ 1.18
NEDD4L-237ENST00000617539 ETNK2Q9NVF9 386 aa22.4■■□□□ 1.18
NEDD4L-237ENST00000617539 ATP8A1Q9Y2Q0 1164 aa22.4■■□□□ 1.18
NEDD4L-237ENST00000617539 PCDHB1Q9Y5F3 818 aa22.4■■□□□ 1.18
NEDD4L-237ENST00000617539 LIG3P49916 1009 aa22.39■■□□□ 1.17
NEDD4L-237ENST00000617539 RALGDSQ12967 914 aa22.39■■□□□ 1.17
NEDD4L-237ENST00000617539 C1orf61Q13536 156 aa22.39■■□□□ 1.17
NEDD4L-237ENST00000617539 PTK2BQ14289 1009 aa22.39■■□□□ 1.17
NEDD4L-237ENST00000617539 TDRD12Q587J7 1177 aaKnown RBP22.39■■□□□ 1.17
NEDD4L-237ENST00000617539 PRRT3Q5FWE3 981 aa22.39■■□□□ 1.17
NEDD4L-237ENST00000617539 GUSBP11Q6P575 273 aa22.39■■□□□ 1.17
NEDD4L-237ENST00000617539 PDZD3Q86UT5 571 aa22.39■■□□□ 1.17
NEDD4L-237ENST00000617539 IFI44Q8TCB0 444 aa22.39■■□□□ 1.17
NEDD4L-237ENST00000617539 SYN2Q92777 582 aaPredicted RBP22.39■■□□□ 1.17
NEDD4L-237ENST00000617539 CRELD1Q96HD1 420 aa22.39■■□□□ 1.17
NEDD4L-237ENST00000617539 BTBD6Q96KE9 485 aa22.39■■□□□ 1.17
NEDD4L-237ENST00000617539 CINPQ9BW66 212 aaPredicted RBP22.39■■□□□ 1.17
NEDD4L-237ENST00000617539 CLPBQ9H078 707 aa22.39■■□□□ 1.17
NEDD4L-237ENST00000617539 ATP13A3Q9H7F0 1226 aa22.39■■□□□ 1.17
NEDD4L-237ENST00000617539 USP29Q9HBJ7 922 aa22.39■■□□□ 1.17
NEDD4L-237ENST00000617539 AK5Q9Y6K8 562 aa22.39■■□□□ 1.17
NEDD4L-237ENST00000617539 SHROOM3Q8TF72 1996 aa22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms