RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 PGLSO95336 258 aa14.82□□□□□ -0.04
CD48-203ENST00000613788 C7P10643 843 aa14.82□□□□□ -0.04
CD48-203ENST00000613788 ACADMP11310 421 aa14.82□□□□□ -0.04
CD48-203ENST00000613788 NFKBIAP25963 317 aa14.82□□□□□ -0.04
CD48-203ENST00000613788 ITGB7P26010 798 aa14.82□□□□□ -0.04
CD48-203ENST00000613788 MAGEA6P43360 314 aa14.82□□□□□ -0.04
CD48-203ENST00000613788 PSMD8P48556 350 aa14.82□□□□□ -0.04
CD48-203ENST00000613788 TERF1P54274 439 aa14.82□□□□□ -0.04
CD48-203ENST00000613788 EPHB1P54762 984 aa14.82□□□□□ -0.04
CD48-203ENST00000613788 GUCY2DQ02846 1103 aa14.82□□□□□ -0.04
CD48-203ENST00000613788 IZUMO3Q5VZ72 239 aa14.82□□□□□ -0.04
CD48-203ENST00000613788 KDELC2Q7Z4H8 507 aa14.82□□□□□ -0.04
CD48-203ENST00000613788 PGBD3Q8N328 593 aa14.82□□□□□ -0.04
CD48-203ENST00000613788 CAMKK1Q8N5S9 505 aa14.82□□□□□ -0.04
CD48-203ENST00000613788 CPT1BQ92523 772 aa14.82□□□□□ -0.04
CD48-203ENST00000613788 SPOCK2Q92563 424 aa14.82□□□□□ -0.04
CD48-203ENST00000613788 VOPP1Q96AW1 172 aa14.82□□□□□ -0.04
CD48-203ENST00000613788 ECHDC3Q96DC8 303 aa14.82□□□□□ -0.04
CD48-203ENST00000613788 MRGPRX1Q96LB2 322 aa14.82□□□□□ -0.04
CD48-203ENST00000613788 TBL1YQ9BQ87 522 aa14.82□□□□□ -0.04
CD48-203ENST00000613788 DPH5Q9H2P9 285 aa14.82□□□□□ -0.04
CD48-203ENST00000613788 POLR3BQ9NW08 1133 aaPredicted RBP14.82□□□□□ -0.04
CD48-203ENST00000613788 WHRNQ9P202 907 aa14.82□□□□□ -0.04
CD48-203ENST00000613788 ANAPC5Q9UJX4 755 aa14.82□□□□□ -0.04
CD48-203ENST00000613788 A0A0C4DFX4 3053 aa14.82□□□□□ -0.04
CD48-203ENST00000613788 ATG2BQ96BY7 2078 aa14.82□□□□□ -0.04
CD48-203ENST00000613788 FZD6O60353 706 aa14.82□□□□□ -0.04
CD48-203ENST00000613788 SEC31AO94979 1220 aaKnown RBP14.82□□□□□ -0.04
CD48-203ENST00000613788 NDST3O95803 873 aa14.82□□□□□ -0.04
CD48-203ENST00000613788 CPP00450 1065 aa14.82□□□□□ -0.04
CD48-203ENST00000613788 AGTP01019 485 aa14.82□□□□□ -0.04
CD48-203ENST00000613788 RHOXF2BP0C7M4 288 aa14.82□□□□□ -0.04
CD48-203ENST00000613788 GABRG2P18507 467 aa14.82□□□□□ -0.04
CD48-203ENST00000613788 HLA-DPA1P20036 260 aa14.82□□□□□ -0.04
CD48-203ENST00000613788 XPAP23025 273 aaPredicted RBP14.82□□□□□ -0.04
CD48-203ENST00000613788 ADRA1AP35348 466 aa14.82□□□□□ -0.04
CD48-203ENST00000613788 RPL21P46778 160 aaKnown RBP14.82□□□□□ -0.04
CD48-203ENST00000613788 KCNJ11Q14654 390 aa14.82□□□□□ -0.04
CD48-203ENST00000613788 MORF4L2Q15014 288 aa14.82□□□□□ -0.04
CD48-203ENST00000613788 TTC31Q49AM3 519 aaPredicted RBP14.82□□□□□ -0.04
CD48-203ENST00000613788 SYCP2LQ5T4T6 812 aa14.82□□□□□ -0.04
CD48-203ENST00000613788 RNASEH2BQ5TBB1 312 aaKnown RBP14.82□□□□□ -0.04
CD48-203ENST00000613788 RANBP10Q6VN20 620 aa14.82□□□□□ -0.04
CD48-203ENST00000613788 HOOK3Q86VS8 718 aa14.82□□□□□ -0.04
CD48-203ENST00000613788 FBXL6Q8N531 539 aa14.82□□□□□ -0.04
CD48-203ENST00000613788 NAT8LQ8N9F0 302 aa14.82□□□□□ -0.04
CD48-203ENST00000613788 HMGB4Q8WW32 186 aa14.82□□□□□ -0.04
CD48-203ENST00000613788 UBXN4Q92575 508 aa14.82□□□□□ -0.04
CD48-203ENST00000613788 RMDN1Q96DB5 314 aa14.82□□□□□ -0.04
CD48-203ENST00000613788 TRIB3Q96RU7 358 aa14.82□□□□□ -0.04
CD48-203ENST00000613788 RHOXF2Q9BQY4 288 aa14.82□□□□□ -0.04
CD48-203ENST00000613788 FICDQ9BVA6 458 aa14.82□□□□□ -0.04
CD48-203ENST00000613788 EPB41L5Q9HCM4 733 aa14.82□□□□□ -0.04
CD48-203ENST00000613788 SPATA6Q9NWH7 488 aaPredicted RBP14.82□□□□□ -0.04
CD48-203ENST00000613788 BCCIPQ9P287 314 aaKnown RBP eCLIP14.82□□□□□ -0.04
CD48-203ENST00000613788 DMGDHQ9UI17 866 aaKnown RBP14.82□□□□□ -0.04
CD48-203ENST00000613788 PHTF1Q9UMS5 762 aa14.82□□□□□ -0.04
CD48-203ENST00000613788 TSPAN11A1L157 253 aa14.81□□□□□ -0.04
CD48-203ENST00000613788 C16orf96A6NNT2 1141 aa14.81□□□□□ -0.04
CD48-203ENST00000613788 ANKRD66B4E2M5 251 aa14.81□□□□□ -0.04
CD48-203ENST00000613788 MID1O15344 667 aa14.81□□□□□ -0.04
CD48-203ENST00000613788 PAPSS2O95340 614 aaPredicted RBP14.81□□□□□ -0.04
CD48-203ENST00000613788 APBB3O95704 486 aa14.81□□□□□ -0.04
CD48-203ENST00000613788 PRLP01236 227 aa14.81□□□□□ -0.04
CD48-203ENST00000613788 PDHA1P08559 390 aa14.81□□□□□ -0.04
CD48-203ENST00000613788 NDUFV2P19404 249 aa14.81□□□□□ -0.04
CD48-203ENST00000613788 GRIA4P48058 902 aa14.81□□□□□ -0.04
CD48-203ENST00000613788 SUOXP51687 545 aa14.81□□□□□ -0.04
CD48-203ENST00000613788 CAV1Q03135 178 aa14.81□□□□□ -0.04
CD48-203ENST00000613788 SPARCL1Q14515 664 aa14.81□□□□□ -0.04
CD48-203ENST00000613788 SLC1A5Q15758 541 aa14.81□□□□□ -0.04
CD48-203ENST00000613788 POM121L1PQ3SYA9 428 aa14.81□□□□□ -0.04
CD48-203ENST00000613788 FBXL19Q6PCT2 694 aa14.81□□□□□ -0.04
CD48-203ENST00000613788 KIAA1324Q6UXG2 1013 aaKnown RBP14.81□□□□□ -0.04
CD48-203ENST00000613788 PPP1R21Q6ZMI0 780 aa14.81□□□□□ -0.04
CD48-203ENST00000613788 ERN2Q76MJ5 926 aaKnown RBP14.81□□□□□ -0.04
CD48-203ENST00000613788 TTC7BQ86TV6 843 aa14.81□□□□□ -0.04
CD48-203ENST00000613788 IFT20Q8IY31 132 aa14.81□□□□□ -0.04
CD48-203ENST00000613788 MCUQ8NE86 351 aa14.81□□□□□ -0.04
CD48-203ENST00000613788 SEC14L1Q92503 715 aa14.81□□□□□ -0.04
CD48-203ENST00000613788 OMDQ99983 421 aa14.81□□□□□ -0.04
CD48-203ENST00000613788 COL25A1Q9BXS0 654 aaPredicted RBP14.81□□□□□ -0.04
CD48-203ENST00000613788 HDAC8Q9BY41 377 aa14.81□□□□□ -0.04
CD48-203ENST00000613788 PABPC3Q9H361 631 aaKnown RBP14.81□□□□□ -0.04
CD48-203ENST00000613788 EPHX3Q9H6B9 360 aa14.81□□□□□ -0.04
CD48-203ENST00000613788 ARNT2Q9HBZ2 717 aa14.81□□□□□ -0.04
CD48-203ENST00000613788 FAM114A2Q9NRY5 505 aa14.81□□□□□ -0.04
CD48-203ENST00000613788 C2orf42Q9NWW7 574 aa14.81□□□□□ -0.04
CD48-203ENST00000613788 NCKAP1Q9Y2A7 1128 aa14.81□□□□□ -0.04
CD48-203ENST00000613788 TECTAO75443 2155 aa14.8□□□□□ -0.04
CD48-203ENST00000613788 USP12O75317 370 aa14.8□□□□□ -0.04
CD48-203ENST00000613788 FGF1P05230 155 aa14.8□□□□□ -0.04
CD48-203ENST00000613788 NEK3P51956 506 aa14.8□□□□□ -0.04
CD48-203ENST00000613788 ITGA8P53708 1063 aa14.8□□□□□ -0.04
CD48-203ENST00000613788 CDH17Q12864 832 aa14.8□□□□□ -0.04
CD48-203ENST00000613788 UGP2Q16851 508 aa14.8□□□□□ -0.04
CD48-203ENST00000613788 ANO7Q6IWH7 933 aa14.8□□□□□ -0.04
CD48-203ENST00000613788 HIBCHQ6NVY1 386 aaPredicted RBP14.8□□□□□ -0.04
CD48-203ENST00000613788 USP30Q70CQ3 517 aa14.8□□□□□ -0.04
CD48-203ENST00000613788 KBTBD6Q86V97 674 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms