RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 HDAC3O15379 428 aa22.12■■□□□ 1.13
POLR2J3-220ENST00000613744 HTRA2O43464 458 aaPredicted RBP22.12■■□□□ 1.13
POLR2J3-220ENST00000613744 FUCA1P04066 466 aa22.12■■□□□ 1.13
POLR2J3-220ENST00000613744 EIF2S1P05198 315 aaKnown RBP22.12■■□□□ 1.13
POLR2J3-220ENST00000613744 PTPN1P18031 435 aaKnown RBP22.12■■□□□ 1.13
POLR2J3-220ENST00000613744 RAP1GAPP47736 663 aa22.12■■□□□ 1.13
POLR2J3-220ENST00000613744 PRKAA2P54646 552 aa22.12■■□□□ 1.13
POLR2J3-220ENST00000613744 RHDQ02161 417 aa22.12■■□□□ 1.13
POLR2J3-220ENST00000613744 IL23RQ5VWK5 629 aa22.12■■□□□ 1.13
POLR2J3-220ENST00000613744 XYLT1Q86Y38 959 aa22.12■■□□□ 1.13
POLR2J3-220ENST00000613744 C3orf58Q8NDZ4 430 aa22.12■■□□□ 1.13
POLR2J3-220ENST00000613744 TRUB1Q8WWH5 349 aaKnown RBP22.12■■□□□ 1.13
POLR2J3-220ENST00000613744 OLFM1Q99784 485 aa22.12■■□□□ 1.13
POLR2J3-220ENST00000613744 UNKQ9C0B0 810 aaKnown RBP22.12■■□□□ 1.13
POLR2J3-220ENST00000613744 ILKAPQ9H0C8 392 aaPredicted RBP22.12■■□□□ 1.13
POLR2J3-220ENST00000613744 VTI1BQ9UEU0 232 aa22.12■■□□□ 1.13
POLR2J3-220ENST00000613744 SLC30A1Q9Y6M5 507 aa22.12■■□□□ 1.13
POLR2J3-220ENST00000613744 SCN1AP35498 2009 aa22.12■■□□□ 1.13
POLR2J3-220ENST00000613744 GOLGA8TH3BQL2 631 aa22.11■■□□□ 1.13
POLR2J3-220ENST00000613744 APOL1O14791 398 aa22.11■■□□□ 1.13
POLR2J3-220ENST00000613744 ZBTB11O95625 1053 aaPredicted RBP22.11■■□□□ 1.13
POLR2J3-220ENST00000613744 ITGB1P05556 798 aa22.11■■□□□ 1.13
POLR2J3-220ENST00000613744 PKNOX1P55347 436 aa22.11■■□□□ 1.13
POLR2J3-220ENST00000613744 DSC1Q08554 894 aa22.11■■□□□ 1.13
POLR2J3-220ENST00000613744 SLC10A2Q12908 348 aaPredicted RBP22.11■■□□□ 1.13
POLR2J3-220ENST00000613744 NRF1Q16656 503 aa22.11■■□□□ 1.13
POLR2J3-220ENST00000613744 PPP4R4Q6NUP7 873 aa22.11■■□□□ 1.13
POLR2J3-220ENST00000613744 UNC5BQ8IZJ1 945 aa22.11■■□□□ 1.13
POLR2J3-220ENST00000613744 ANKFN1Q8N957 763 aa22.11■■□□□ 1.13
POLR2J3-220ENST00000613744 MAPK15Q8TD08 544 aa22.11■■□□□ 1.13
POLR2J3-220ENST00000613744 TFAP2BQ92481 460 aa22.11■■□□□ 1.13
POLR2J3-220ENST00000613744 NAT9Q9BTE0 207 aa22.11■■□□□ 1.13
POLR2J3-220ENST00000613744 MRPL9Q9BYD2 267 aaKnown RBP22.11■■□□□ 1.13
POLR2J3-220ENST00000613744 RPF2Q9H7B2 306 aaKnown RBP22.11■■□□□ 1.13
POLR2J3-220ENST00000613744 MAN1C1Q9NR34 630 aa22.11■■□□□ 1.13
POLR2J3-220ENST00000613744 GID8Q9NWU2 228 aa22.11■■□□□ 1.13
POLR2J3-220ENST00000613744 RAP2CQ9Y3L5 183 aa22.11■■□□□ 1.13
POLR2J3-220ENST00000613744 MRPL42Q9Y6G3 142 aaKnown RBP22.11■■□□□ 1.13
POLR2J3-220ENST00000613744 SULT1C4O75897 302 aa22.11■■□□□ 1.13
POLR2J3-220ENST00000613744 ENO3P13929 434 aaPredicted RBP22.11■■□□□ 1.13
POLR2J3-220ENST00000613744 CYP3A5P20815 502 aa22.11■■□□□ 1.13
POLR2J3-220ENST00000613744 SLC7A1P30825 629 aa22.11■■□□□ 1.13
POLR2J3-220ENST00000613744 ASPAP45381 313 aa22.11■■□□□ 1.13
POLR2J3-220ENST00000613744 RPS3AP61247 264 aaKnown RBP22.11■■□□□ 1.13
POLR2J3-220ENST00000613744 MMRN1Q13201 1228 aa22.11■■□□□ 1.13
POLR2J3-220ENST00000613744 TAF5Q15542 800 aa22.11■■□□□ 1.13
POLR2J3-220ENST00000613744 UPP1Q16831 310 aa22.11■■□□□ 1.13
POLR2J3-220ENST00000613744 DENND1BQ6P3S1 775 aa22.11■■□□□ 1.13
POLR2J3-220ENST00000613744 CHRDL2Q6WN34 429 aa22.11■■□□□ 1.13
POLR2J3-220ENST00000613744 LYSMD3Q7Z3D4 306 aa22.11■■□□□ 1.13
POLR2J3-220ENST00000613744 MPP5Q8N3R9 675 aa22.11■■□□□ 1.13
POLR2J3-220ENST00000613744 MFSD2AQ8NA29 543 aa22.11■■□□□ 1.13
POLR2J3-220ENST00000613744 MCRS1Q96EZ8 462 aa22.11■■□□□ 1.13
POLR2J3-220ENST00000613744 CWH43Q9H720 699 aa22.11■■□□□ 1.13
POLR2J3-220ENST00000613744 GPC6Q9Y625 555 aaPredicted RBP22.11■■□□□ 1.13
POLR2J3-220ENST00000613744 ZNF487B1APH4 448 aa22.1■■□□□ 1.13
POLR2J3-220ENST00000613744 PIRO00625 290 aa22.1■■□□□ 1.13
POLR2J3-220ENST00000613744 SPTLC1O15269 473 aa22.1■■□□□ 1.13
POLR2J3-220ENST00000613744 SNAP91O60641 907 aa22.1■■□□□ 1.13
POLR2J3-220ENST00000613744 TRIM13O60858 407 aa22.1■■□□□ 1.13
POLR2J3-220ENST00000613744 B3GAT3O94766 335 aa22.1■■□□□ 1.13
POLR2J3-220ENST00000613744 ATICP31939 592 aa22.1■■□□□ 1.13
POLR2J3-220ENST00000613744 CDH8P55286 799 aa22.1■■□□□ 1.13
POLR2J3-220ENST00000613744 SEMA5AQ13591 1074 aa22.1■■□□□ 1.13
POLR2J3-220ENST00000613744 TRIM25Q14258 630 aaKnown RBP22.1■■□□□ 1.13
POLR2J3-220ENST00000613744 NHSL2Q5HYW2 709 aa22.1■■□□□ 1.13
POLR2J3-220ENST00000613744 SLC9A4Q6AI14 798 aa22.1■■□□□ 1.13
POLR2J3-220ENST00000613744 C16orf87Q6PH81 154 aa22.1■■□□□ 1.13
POLR2J3-220ENST00000613744 PHOSPHO2Q8TCD6 241 aa22.1■■□□□ 1.13
POLR2J3-220ENST00000613744 TFAP2CQ92754 450 aa22.1■■□□□ 1.13
POLR2J3-220ENST00000613744 TSPAN18Q96SJ8 248 aa22.1■■□□□ 1.13
POLR2J3-220ENST00000613744 ZBTB26Q9HCK0 441 aa22.1■■□□□ 1.13
POLR2J3-220ENST00000613744 STAU2Q9NUL3 570 aaKnown RBP eCLIP22.1■■□□□ 1.13
POLR2J3-220ENST00000613744 INSL6Q9Y581 213 aa22.1■■□□□ 1.13
POLR2J3-220ENST00000613744 K7EPI3 171 aa22.1■■□□□ 1.13
POLR2J3-220ENST00000613744 CFLARO15519 480 aa22.1■■□□□ 1.13
POLR2J3-220ENST00000613744 VAPBO95292 243 aa22.1■■□□□ 1.13
POLR2J3-220ENST00000613744 TYK2P29597 1187 aa22.1■■□□□ 1.13
POLR2J3-220ENST00000613744 LRPAP1P30533 357 aa22.1■■□□□ 1.13
POLR2J3-220ENST00000613744 SLC11A1P49279 550 aa22.1■■□□□ 1.13
POLR2J3-220ENST00000613744 ZNF143P52747 638 aaPredicted RBP22.1■■□□□ 1.13
POLR2J3-220ENST00000613744 BCAR1P56945 870 aa22.1■■□□□ 1.13
POLR2J3-220ENST00000613744 HTRA4P83105 476 aaPredicted RBP22.1■■□□□ 1.13
POLR2J3-220ENST00000613744 ZNF394Q53GI3 561 aa22.1■■□□□ 1.13
POLR2J3-220ENST00000613744 PPM1LQ5SGD2 360 aa22.1■■□□□ 1.13
POLR2J3-220ENST00000613744 PDPRQ8NCN5 879 aa22.1■■□□□ 1.13
POLR2J3-220ENST00000613744 SLC7A14Q8TBB6 771 aa22.1■■□□□ 1.13
POLR2J3-220ENST00000613744 CASP10Q92851 521 aa22.1■■□□□ 1.13
POLR2J3-220ENST00000613744 RAD9AQ99638 391 aa22.1■■□□□ 1.13
POLR2J3-220ENST00000613744 GIN1Q9NXP7 522 aa22.1■■□□□ 1.13
POLR2J3-220ENST00000613744 SNX9Q9Y5X1 595 aa22.1■■□□□ 1.13
POLR2J3-220ENST00000613744 NRP1O14786 923 aa22.09■■□□□ 1.13
POLR2J3-220ENST00000613744 GIPC1O14908 333 aa22.09■■□□□ 1.13
POLR2J3-220ENST00000613744 MYF6P23409 242 aa22.09■■□□□ 1.13
POLR2J3-220ENST00000613744 DPP6P42658 865 aa22.09■■□□□ 1.13
POLR2J3-220ENST00000613744 LSM12Q3MHD2 195 aaKnown RBP22.09■■□□□ 1.13
POLR2J3-220ENST00000613744 GRTP1Q5TC63 336 aa22.09■■□□□ 1.13
POLR2J3-220ENST00000613744 SEL1L3Q68CR1 1132 aa22.09■■□□□ 1.13
POLR2J3-220ENST00000613744 TMEM173Q86WV6 379 aaPredicted RBP22.09■■□□□ 1.13
POLR2J3-220ENST00000613744 ATP6V1E2Q96A05 226 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms