RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 UNC5BQ8IZJ1 945 aa9□□□□□ -0.97
CCDC47-207ENST00000612558 LINC00528Q8N1L1 170 aa9□□□□□ -0.97
CCDC47-207ENST00000612558 SLC25A41Q8N5S1 370 aa9□□□□□ -0.97
CCDC47-207ENST00000612558 KIAA1958Q8N8K9 716 aa9□□□□□ -0.97
CCDC47-207ENST00000612558 WFDC5Q8TCV5 224 aa9□□□□□ -0.97
CCDC47-207ENST00000612558 GDPD5Q8WTR4 605 aa9□□□□□ -0.97
CCDC47-207ENST00000612558 PPP2R3CQ969Q6 453 aa9□□□□□ -0.97
CCDC47-207ENST00000612558 ACDQ96AP0 544 aa9□□□□□ -0.97
CCDC47-207ENST00000612558 OTUB2Q96DC9 234 aa9□□□□□ -0.97
CCDC47-207ENST00000612558 MFSD3Q96ES6 412 aa9□□□□□ -0.97
CCDC47-207ENST00000612558 IFT43Q96FT9 208 aa9□□□□□ -0.97
CCDC47-207ENST00000612558 ZSWIM3Q96MP5 696 aa9□□□□□ -0.97
CCDC47-207ENST00000612558 NUDCD1Q96RS6 583 aa9□□□□□ -0.97
CCDC47-207ENST00000612558 RANBP9Q96S59 729 aa9□□□□□ -0.97
CCDC47-207ENST00000612558 NOD2Q9HC29 1040 aa9□□□□□ -0.97
CCDC47-207ENST00000612558 INTS9Q9NV88 658 aaKnown RBP9□□□□□ -0.97
CCDC47-207ENST00000612558 DZANK1Q9NVP4 752 aa9□□□□□ -0.97
CCDC47-207ENST00000612558 PLK2Q9NYY3 685 aa9□□□□□ -0.97
CCDC47-207ENST00000612558 ZFATQ9P243 1243 aa9□□□□□ -0.97
CCDC47-207ENST00000612558 PRKAG3Q9UGI9 489 aa9□□□□□ -0.97
CCDC47-207ENST00000612558 VPS51Q9UID3 782 aa9□□□□□ -0.97
CCDC47-207ENST00000612558 SMG5Q9UPR3 1016 aaKnown RBP9□□□□□ -0.97
CCDC47-207ENST00000612558 TCAF1Q9Y4C2 921 aa9□□□□□ -0.97
CCDC47-207ENST00000612558 RANBP2P49792 3224 aaKnown RBP9□□□□□ -0.97
CCDC47-207ENST00000612558 PRRC2BQ5JSZ5 2229 aaKnown RBP9□□□□□ -0.97
CCDC47-207ENST00000612558 HEATR9A2RTY3 570 aa8.99□□□□□ -0.97
CCDC47-207ENST00000612558 EPOPA6NHQ4 379 aa8.99□□□□□ -0.97
CCDC47-207ENST00000612558 FAM47DPA6NHR8 397 aa8.99□□□□□ -0.97
CCDC47-207ENST00000612558 TRIM49D1C9J1S8 452 aa8.99□□□□□ -0.97
CCDC47-207ENST00000612558 SLC9A3R1O14745 358 aaPredicted RBP8.99□□□□□ -0.97
CCDC47-207ENST00000612558 UGT1A9O60656 530 aa8.99□□□□□ -0.97
CCDC47-207ENST00000612558 TMCC1O94876 653 aa8.99□□□□□ -0.97
CCDC47-207ENST00000612558 PENKP01210 267 aaPredicted RBP8.99□□□□□ -0.97
CCDC47-207ENST00000612558 FGF1P05230 155 aa8.99□□□□□ -0.97
CCDC47-207ENST00000612558 ATXN1LP0C7T5 689 aaKnown RBP8.99□□□□□ -0.97
CCDC47-207ENST00000612558 ERVK-10P10266 1014 aa8.99□□□□□ -0.97
CCDC47-207ENST00000612558 CEBPBP17676 345 aa8.99□□□□□ -0.97
CCDC47-207ENST00000612558 HLA-DPA1P20036 260 aa8.99□□□□□ -0.97
CCDC47-207ENST00000612558 NMBRP28336 390 aa8.99□□□□□ -0.97
CCDC47-207ENST00000612558 PPARDQ03181 441 aa8.99□□□□□ -0.97
CCDC47-207ENST00000612558 SLC20A2Q08357 652 aa8.99□□□□□ -0.97
CCDC47-207ENST00000612558 LMAN2Q12907 356 aa8.99□□□□□ -0.97
CCDC47-207ENST00000612558 USP4Q13107 963 aa8.99□□□□□ -0.97
CCDC47-207ENST00000612558 DNAJC3Q13217 504 aa8.99□□□□□ -0.97
CCDC47-207ENST00000612558 MSLNQ13421 630 aaPredicted RBP8.99□□□□□ -0.97
CCDC47-207ENST00000612558 LAMB3Q13751 1172 aa8.99□□□□□ -0.97
CCDC47-207ENST00000612558 CBX2Q14781 532 aaPredicted RBP8.99□□□□□ -0.97
CCDC47-207ENST00000612558 SUZ12Q15022 739 aaKnown RBP8.99□□□□□ -0.97
CCDC47-207ENST00000612558 RALGPS1Q5JS13 557 aa8.99□□□□□ -0.97
CCDC47-207ENST00000612558 SIRPB2Q5JXA9 342 aa8.99□□□□□ -0.97
CCDC47-207ENST00000612558 PRPF38BQ5VTL8 546 aaKnown RBP8.99□□□□□ -0.97
CCDC47-207ENST00000612558 PDPK2PQ6A1A2 396 aa8.99□□□□□ -0.97
CCDC47-207ENST00000612558 TMC5Q6UXY8 1006 aa8.99□□□□□ -0.97
CCDC47-207ENST00000612558 LINGO4Q6UY18 593 aa8.99□□□□□ -0.97
CCDC47-207ENST00000612558 NLRP9Q7RTR0 991 aa8.99□□□□□ -0.97
CCDC47-207ENST00000612558 KCNMB4Q86W47 210 aa8.99□□□□□ -0.97
CCDC47-207ENST00000612558 RASSF3Q86WH2 238 aa8.99□□□□□ -0.97
CCDC47-207ENST00000612558 TMEM25Q86YD3 366 aa8.99□□□□□ -0.97
CCDC47-207ENST00000612558 APCDD1Q8J025 514 aa8.99□□□□□ -0.97
CCDC47-207ENST00000612558 C4orf33Q8N1A6 199 aa8.99□□□□□ -0.97
CCDC47-207ENST00000612558 TMEM151AQ8N4L1 468 aa8.99□□□□□ -0.97
CCDC47-207ENST00000612558 CELF5Q8N6W0 485 aaKnown RBP8.99□□□□□ -0.97
CCDC47-207ENST00000612558 C12orf76Q8N812 135 aaPredicted RBP8.99□□□□□ -0.97
CCDC47-207ENST00000612558 ZNF557Q8N988 423 aaPredicted RBP8.99□□□□□ -0.97
CCDC47-207ENST00000612558 RIN3Q8TB24 985 aa8.99□□□□□ -0.97
CCDC47-207ENST00000612558 ITFG1Q8TB96 612 aa8.99□□□□□ -0.97
CCDC47-207ENST00000612558 ING5Q8WYH8 240 aa8.99□□□□□ -0.97
CCDC47-207ENST00000612558 SGSM3Q96HU1 749 aa8.99□□□□□ -0.97
CCDC47-207ENST00000612558 CPNE1Q99829 537 aa8.99□□□□□ -0.97
CCDC47-207ENST00000612558 KIF9Q9HAQ2 790 aa8.99□□□□□ -0.97
CCDC47-207ENST00000612558 UGT1A7Q9HAW7 530 aa8.99□□□□□ -0.97
CCDC47-207ENST00000612558 UGT1A10Q9HAW8 530 aa8.99□□□□□ -0.97
CCDC47-207ENST00000612558 UGT1A8Q9HAW9 530 aa8.99□□□□□ -0.97
CCDC47-207ENST00000612558 C20orf96Q9NUD7 363 aaPredicted RBP8.99□□□□□ -0.97
CCDC47-207ENST00000612558 NKIRAS1Q9NYS0 192 aa8.99□□□□□ -0.97
CCDC47-207ENST00000612558 TXNDC16Q9P2K2 825 aa8.99□□□□□ -0.97
CCDC47-207ENST00000612558 CLEC4EQ9ULY5 219 aa8.99□□□□□ -0.97
CCDC47-207ENST00000612558 ATG2AQ2TAZ0 1938 aa8.99□□□□□ -0.97
CCDC47-207ENST00000612558 TYROBPO43914 113 aa8.99□□□□□ -0.97
CCDC47-207ENST00000612558 SPAG7O75391 227 aa8.99□□□□□ -0.97
CCDC47-207ENST00000612558 GJB3O75712 270 aa8.99□□□□□ -0.97
CCDC47-207ENST00000612558 PAPSS2O95340 614 aaPredicted RBP8.99□□□□□ -0.97
CCDC47-207ENST00000612558 NDST3O95803 873 aa8.99□□□□□ -0.97
CCDC47-207ENST00000612558 F12P00748 615 aaPredicted RBP8.99□□□□□ -0.97
CCDC47-207ENST00000612558 ALADP13716 330 aa8.99□□□□□ -0.97
CCDC47-207ENST00000612558 PAMP19021 973 aa8.99□□□□□ -0.97
CCDC47-207ENST00000612558 GP5P40197 560 aa8.99□□□□□ -0.97
CCDC47-207ENST00000612558 RGRP47804 291 aa8.99□□□□□ -0.97
CCDC47-207ENST00000612558 RHOAP61586 193 aa8.99□□□□□ -0.97
CCDC47-207ENST00000612558 MPP2Q14168 576 aa8.99□□□□□ -0.97
CCDC47-207ENST00000612558 PLEKHG6Q3KR16 790 aa8.99□□□□□ -0.97
CCDC47-207ENST00000612558 HSP90AA5PQ58FG0 334 aa8.99□□□□□ -0.97
CCDC47-207ENST00000612558 TEDDM1Q5T9Z0 273 aa8.99□□□□□ -0.97
CCDC47-207ENST00000612558 COL13A1Q5TAT6 717 aaPredicted RBP8.99□□□□□ -0.97
CCDC47-207ENST00000612558 GRTP1Q5TC63 336 aa8.99□□□□□ -0.97
CCDC47-207ENST00000612558 ESRP1Q6NXG1 681 aaKnown RBP8.99□□□□□ -0.97
CCDC47-207ENST00000612558 PACS1Q6VY07 963 aa8.99□□□□□ -0.97
CCDC47-207ENST00000612558 TIFABQ6ZNK6 161 aa8.99□□□□□ -0.97
CCDC47-207ENST00000612558 SH2D5Q6ZV89 423 aa8.99□□□□□ -0.97
CCDC47-207ENST00000612558 ADGRG2Q8IZP9 1017 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms