RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 QPCTQ16769 361 aa7.33□□□□□ -1.24
CSDE1-218ENST00000610726 TCHHL1Q5QJ38 904 aaPredicted RBP7.33□□□□□ -1.24
CSDE1-218ENST00000610726 MORN1Q5T089 497 aa7.33□□□□□ -1.24
CSDE1-218ENST00000610726 NCBP2-AS2Q69YL0 99 aa7.33□□□□□ -1.24
CSDE1-218ENST00000610726 MFSD5Q6N075 450 aa7.33□□□□□ -1.24
CSDE1-218ENST00000610726 ARMC6Q6NXE6 501 aa7.33□□□□□ -1.24
CSDE1-218ENST00000610726 FBXL22Q6P050 247 aa7.33□□□□□ -1.24
CSDE1-218ENST00000610726 CNSTQ6PJW8 725 aa7.33□□□□□ -1.24
CSDE1-218ENST00000610726 TMC5Q6UXY8 1006 aa7.33□□□□□ -1.24
CSDE1-218ENST00000610726 DNAJC9Q8WXX5 260 aa7.33□□□□□ -1.24
CSDE1-218ENST00000610726 PIK3R5Q8WYR1 880 aa7.33□□□□□ -1.24
CSDE1-218ENST00000610726 ELMO1Q92556 727 aa7.33□□□□□ -1.24
CSDE1-218ENST00000610726 ZCCHC2Q9C0B9 1178 aaKnown RBP7.33□□□□□ -1.24
CSDE1-218ENST00000610726 SLC25A51Q9H1U9 297 aa7.33□□□□□ -1.24
CSDE1-218ENST00000610726 TMEM59LQ9UK28 342 aa7.33□□□□□ -1.24
CSDE1-218ENST00000610726 APPL1Q9UKG1 709 aa7.33□□□□□ -1.24
CSDE1-218ENST00000610726 FCF1Q9Y324 198 aaKnown RBP7.33□□□□□ -1.24
CSDE1-218ENST00000610726 MFHAS1Q9Y4C4 1052 aa7.33□□□□□ -1.24
CSDE1-218ENST00000610726 MYH8P13535 1937 aa7.33□□□□□ -1.24
CSDE1-218ENST00000610726 C4AP0C0L4 1744 aa7.33□□□□□ -1.24
CSDE1-218ENST00000610726 TTC24A2A3L6 582 aaPredicted RBP7.33□□□□□ -1.24
CSDE1-218ENST00000610726 ENPP3O14638 875 aa7.33□□□□□ -1.24
CSDE1-218ENST00000610726 ZMPSTE24O75844 475 aa7.33□□□□□ -1.24
CSDE1-218ENST00000610726 CPSF4O95639 269 aaKnown RBP7.33□□□□□ -1.24
CSDE1-218ENST00000610726 NDST3O95803 873 aa7.33□□□□□ -1.24
CSDE1-218ENST00000610726 VCLP18206 1134 aa7.33□□□□□ -1.24
CSDE1-218ENST00000610726 NMBRP28336 390 aa7.33□□□□□ -1.24
CSDE1-218ENST00000610726 FASTKQ14296 549 aaKnown RBP7.33□□□□□ -1.24
CSDE1-218ENST00000610726 PLCL1Q15111 1095 aa7.33□□□□□ -1.24
CSDE1-218ENST00000610726 MPPE1Q53F39 396 aa7.33□□□□□ -1.24
CSDE1-218ENST00000610726 GET4Q7L5D6 327 aaPredicted RBP7.33□□□□□ -1.24
CSDE1-218ENST00000610726 ZNF572Q7Z3I7 529 aaPredicted RBP7.33□□□□□ -1.24
CSDE1-218ENST00000610726 TMPRSS6Q8IU80 811 aa7.33□□□□□ -1.24
CSDE1-218ENST00000610726 CYP4X1Q8N118 509 aa7.33□□□□□ -1.24
CSDE1-218ENST00000610726 NKAPQ8N5F7 415 aaKnown RBP7.33□□□□□ -1.24
CSDE1-218ENST00000610726 KYQ8NBH2 561 aa7.33□□□□□ -1.24
CSDE1-218ENST00000610726 ARNTL2Q8WYA1 636 aa7.33□□□□□ -1.24
CSDE1-218ENST00000610726 KCTD13Q8WZ19 329 aa7.33□□□□□ -1.24
CSDE1-218ENST00000610726 NTAN1Q96AB6 310 aa7.33□□□□□ -1.24
CSDE1-218ENST00000610726 MTFMTQ96DP5 389 aaKnown RBP7.33□□□□□ -1.24
CSDE1-218ENST00000610726 ZIC5Q96T25 663 aa7.33□□□□□ -1.24
CSDE1-218ENST00000610726 SH3GL2Q99962 352 aa7.33□□□□□ -1.24
CSDE1-218ENST00000610726 FAM126AQ9BYI3 521 aaPredicted RBP7.33□□□□□ -1.24
CSDE1-218ENST00000610726 CAPN10Q9HC96 672 aa7.33□□□□□ -1.24
CSDE1-218ENST00000610726 OPTCQ9UBM4 332 aa7.33□□□□□ -1.24
CSDE1-218ENST00000610726 PACSIN3Q9UKS6 424 aa7.33□□□□□ -1.24
CSDE1-218ENST00000610726 STARD13Q9Y3M8 1113 aa7.33□□□□□ -1.24
CSDE1-218ENST00000610726 HBS1LQ9Y450 684 aaKnown RBP7.33□□□□□ -1.24
CSDE1-218ENST00000610726 MYO5AQ9Y4I1 1855 aaKnown RBP7.32□□□□□ -1.24
CSDE1-218ENST00000610726 TIAM2Q8IVF5 1701 aa7.32□□□□□ -1.24
CSDE1-218ENST00000610726 PTGESO14684 152 aa7.32□□□□□ -1.24
CSDE1-218ENST00000610726 INPP4BO15327 924 aa7.32□□□□□ -1.24
CSDE1-218ENST00000610726 ZSCAN9O15535 394 aaPredicted RBP7.32□□□□□ -1.24
CSDE1-218ENST00000610726 PEX11AO75192 247 aa7.32□□□□□ -1.24
CSDE1-218ENST00000610726 SEC22BO75396 215 aa7.32□□□□□ -1.24
CSDE1-218ENST00000610726 CYBAP13498 195 aa7.32□□□□□ -1.24
CSDE1-218ENST00000610726 DGKAP23743 735 aa7.32□□□□□ -1.24
CSDE1-218ENST00000610726 EPHA3P29320 983 aa7.32□□□□□ -1.24
CSDE1-218ENST00000610726 ZNF132P52740 706 aa7.32□□□□□ -1.24
CSDE1-218ENST00000610726 SEMG2Q02383 582 aa7.32□□□□□ -1.24
CSDE1-218ENST00000610726 CDC16Q13042 620 aa7.32□□□□□ -1.24
CSDE1-218ENST00000610726 UPP1Q16831 310 aa7.32□□□□□ -1.24
CSDE1-218ENST00000610726 ACBD5Q5T8D3 534 aaPredicted RBP7.32□□□□□ -1.24
CSDE1-218ENST00000610726 RAET1GQ6H3X3 334 aa7.32□□□□□ -1.24
CSDE1-218ENST00000610726 IL27RAQ6UWB1 636 aa7.32□□□□□ -1.24
CSDE1-218ENST00000610726 LZICQ8WZA0 190 aa7.32□□□□□ -1.24
CSDE1-218ENST00000610726 JADE3Q92613 823 aa7.32□□□□□ -1.24
CSDE1-218ENST00000610726 COPS8Q99627 209 aa7.32□□□□□ -1.24
CSDE1-218ENST00000610726 RBBP8Q99708 897 aa7.32□□□□□ -1.24
CSDE1-218ENST00000610726 C11orf49Q9H6J7 331 aa7.32□□□□□ -1.24
CSDE1-218ENST00000610726 YY1AP1Q9H869 796 aa7.32□□□□□ -1.24
CSDE1-218ENST00000610726 VRTNQ9H8Y1 702 aa7.32□□□□□ -1.24
CSDE1-218ENST00000610726 DEC1Q9P2X7 70 aa7.32□□□□□ -1.24
CSDE1-218ENST00000610726 KLQ9UEF7 1012 aa7.32□□□□□ -1.24
CSDE1-218ENST00000610726 VTI1BQ9UEU0 232 aa7.32□□□□□ -1.24
CSDE1-218ENST00000610726 RABGEF1Q9UJ41 708 aa7.32□□□□□ -1.24
CSDE1-218ENST00000610726 FAM32AQ9Y421 112 aaKnown RBP7.32□□□□□ -1.24
CSDE1-218ENST00000610726 YIPF1Q9Y548 306 aa7.32□□□□□ -1.24
CSDE1-218ENST00000610726 ANKRD36CQ5JPF3 1778 aa7.32□□□□□ -1.24
CSDE1-218ENST00000610726 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.32□□□□□ -1.24
CSDE1-218ENST00000610726 FFAR3O14843 346 aa7.32□□□□□ -1.24
CSDE1-218ENST00000610726 GPR42O15529 346 aa7.32□□□□□ -1.24
CSDE1-218ENST00000610726 F7P08709 466 aaPredicted RBP7.32□□□□□ -1.24
CSDE1-218ENST00000610726 ALOX15P16050 662 aaPredicted RBP7.32□□□□□ -1.24
CSDE1-218ENST00000610726 GPR1P46091 355 aa7.32□□□□□ -1.24
CSDE1-218ENST00000610726 VEGFBP49765 207 aa7.32□□□□□ -1.24
CSDE1-218ENST00000610726 PRKAA2P54646 552 aa7.32□□□□□ -1.24
CSDE1-218ENST00000610726 CDH4P55283 916 aa7.32□□□□□ -1.24
CSDE1-218ENST00000610726 GRM3Q14832 879 aa7.32□□□□□ -1.24
CSDE1-218ENST00000610726 AASDHQ4L235 1098 aaPredicted RBP7.32□□□□□ -1.24
CSDE1-218ENST00000610726 FBXO48Q5FWF7 155 aa7.32□□□□□ -1.24
CSDE1-218ENST00000610726 PPP1R15BQ5SWA1 713 aa7.32□□□□□ -1.24
CSDE1-218ENST00000610726 ADGRD1Q6QNK2 874 aa7.32□□□□□ -1.24
CSDE1-218ENST00000610726 IFNLR1Q8IU57 520 aaPredicted RBP7.32□□□□□ -1.24
CSDE1-218ENST00000610726 DENND6AQ8IWF6 608 aa7.32□□□□□ -1.24
CSDE1-218ENST00000610726 UNC5BQ8IZJ1 945 aa7.32□□□□□ -1.24
CSDE1-218ENST00000610726 MYO19Q96H55 970 aa7.32□□□□□ -1.24
CSDE1-218ENST00000610726 CYP2S1Q96SQ9 504 aa7.32□□□□□ -1.24
CSDE1-218ENST00000610726 NPY6RQ99463 290 aa7.32□□□□□ -1.24
CSDE1-218ENST00000610726 AGAP2Q99490 1192 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms