RNA–Protein interactions for RNA: ENST00000610535.4

TNIP1-220, Transcript of TNFAIP3 interacting protein 1, humanhuman

TSL 5 BASIC

Gene TNIP1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-220ENST00000610535 NSMCE4AQ9NXX6 385 aa17.07■□□□□ 0.32
TNIP1-220ENST00000610535 YJEFN3A6XGL0 299 aa17.06■□□□□ 0.32
TNIP1-220ENST00000610535 CNMDO75829 334 aa17.06■□□□□ 0.32
TNIP1-220ENST00000610535 NUP107P57740 925 aa17.06■□□□□ 0.32
TNIP1-220ENST00000610535 ESRRGP62508 458 aa17.06■□□□□ 0.32
TNIP1-220ENST00000610535 SAMD4BQ5PRF9 694 aaKnown RBP17.06■□□□□ 0.32
TNIP1-220ENST00000610535 Q6ZNX1 250 aa17.06■□□□□ 0.32
TNIP1-220ENST00000610535 ARHGAP36Q6ZRI8 547 aa17.06■□□□□ 0.32
TNIP1-220ENST00000610535 PAQR9Q6ZVX9 377 aa17.06■□□□□ 0.32
TNIP1-220ENST00000610535 CUZD1Q86UP6 607 aa17.06■□□□□ 0.32
TNIP1-220ENST00000610535 LZTR1Q8N653 840 aa17.06■□□□□ 0.32
TNIP1-220ENST00000610535 ANKFN1Q8N957 763 aa17.06■□□□□ 0.32
TNIP1-220ENST00000610535 SMYD1Q8NB12 490 aa17.06■□□□□ 0.32
TNIP1-220ENST00000610535 B3GALNT2Q8NCR0 500 aa17.06■□□□□ 0.32
TNIP1-220ENST00000610535 IPMKQ8NFU5 416 aa17.06■□□□□ 0.32
TNIP1-220ENST00000610535 HDAC11Q96DB2 347 aa17.06■□□□□ 0.32
TNIP1-220ENST00000610535 SPON1Q9HCB6 807 aa17.06■□□□□ 0.32
TNIP1-220ENST00000610535 FAIMQ9NVQ4 179 aa17.06■□□□□ 0.32
TNIP1-220ENST00000610535 RNF181Q9P0P0 153 aa17.06■□□□□ 0.32
TNIP1-220ENST00000610535 RECQL4O94761 1208 aa17.06■□□□□ 0.32
TNIP1-220ENST00000610535 ATE1O95260 518 aa17.06■□□□□ 0.32
TNIP1-220ENST00000610535 YBX3P16989 372 aaKnown RBP eCLIP17.06■□□□□ 0.322e-8■■□□□ 13.1
TNIP1-220ENST00000610535 PSMD7P51665 324 aa17.06■□□□□ 0.32
TNIP1-220ENST00000610535 SLC5A3P53794 718 aa17.06■□□□□ 0.32
TNIP1-220ENST00000610535 MAP3K7CLP57077 242 aa17.06■□□□□ 0.32
TNIP1-220ENST00000610535 YBX1P67809 324 aaKnown RBP17.06■□□□□ 0.32
TNIP1-220ENST00000610535 ARHGAP1Q07960 439 aa17.06■□□□□ 0.32
TNIP1-220ENST00000610535 TTLL4Q14679 1199 aa17.06■□□□□ 0.32
TNIP1-220ENST00000610535 MAPRE2Q15555 327 aa17.06■□□□□ 0.32
TNIP1-220ENST00000610535 RBM20Q5T481 1227 aaKnown RBP17.06■□□□□ 0.32
TNIP1-220ENST00000610535 DUS3LQ96G46 650 aaKnown RBP17.06■□□□□ 0.32
TNIP1-220ENST00000610535 MPHOSPH6Q99547 160 aaKnown RBP17.06■□□□□ 0.32
TNIP1-220ENST00000610535 ATXN3LQ9H3M9 355 aa17.06■□□□□ 0.32
TNIP1-220ENST00000610535 MEAF6Q9HAF1 191 aa17.06■□□□□ 0.32
TNIP1-220ENST00000610535 EGFL7Q9UHF1 273 aa17.06■□□□□ 0.32
TNIP1-220ENST00000610535 CSADQ9Y600 493 aa17.06■□□□□ 0.32
TNIP1-220ENST00000610535 C9JVG2 144 aa17.05■□□□□ 0.32
TNIP1-220ENST00000610535 PIRO00625 290 aa17.05■□□□□ 0.32
TNIP1-220ENST00000610535 NCAM2O15394 837 aa17.05■□□□□ 0.32
TNIP1-220ENST00000610535 SRP72O76094 671 aaKnown RBP17.05■□□□□ 0.32
TNIP1-220ENST00000610535 BMP2P12643 396 aa17.05■□□□□ 0.32
TNIP1-220ENST00000610535 IGFBP6P24592 240 aaPredicted RBP17.05■□□□□ 0.32
TNIP1-220ENST00000610535 MAGEA10P43363 369 aaPredicted RBP17.05■□□□□ 0.32
TNIP1-220ENST00000610535 ARCN1P48444 511 aaKnown RBP17.05■□□□□ 0.32
TNIP1-220ENST00000610535 GALNT2Q10471 571 aa17.05■□□□□ 0.32
TNIP1-220ENST00000610535 ZBED5Q49AG3 693 aa17.05■□□□□ 0.32
TNIP1-220ENST00000610535 ZNF789Q5FWF6 425 aa17.05■□□□□ 0.32
TNIP1-220ENST00000610535 PCID2Q5JVF3 399 aa17.05■□□□□ 0.32
TNIP1-220ENST00000610535 ANKRD23Q86SG2 305 aa17.05■□□□□ 0.32
TNIP1-220ENST00000610535 RETREG3Q86VR2 466 aa17.05■□□□□ 0.32
TNIP1-220ENST00000610535 SPPL2CQ8IUH8 684 aa17.05■□□□□ 0.32
TNIP1-220ENST00000610535 OR2T34Q8NGX1 318 aa17.05■□□□□ 0.32
TNIP1-220ENST00000610535 OR2T3Q8NH03 318 aa17.05■□□□□ 0.32
TNIP1-220ENST00000610535 GIPC3Q8TF64 312 aa17.05■□□□□ 0.32
TNIP1-220ENST00000610535 SLC2A13Q96QE2 648 aa17.05■□□□□ 0.32
TNIP1-220ENST00000610535 TCF12Q99081 682 aa17.05■□□□□ 0.32
TNIP1-220ENST00000610535 ULBP1Q9BZM6 244 aa17.05■□□□□ 0.32
TNIP1-220ENST00000610535 MUC3BQ9H195 1237 aa17.05■□□□□ 0.32
TNIP1-220ENST00000610535 A0A087WXM4 84 aa17.05■□□□□ 0.32
TNIP1-220ENST00000610535 NAA20P61599 178 aa17.05■□□□□ 0.32
TNIP1-220ENST00000610535 PRPSAP1Q14558 356 aa17.05■□□□□ 0.32
TNIP1-220ENST00000610535 UGP2Q16851 508 aa17.05■□□□□ 0.32
TNIP1-220ENST00000610535 ZNF470Q6ECI4 717 aa17.05■□□□□ 0.32
TNIP1-220ENST00000610535 CYHR1Q6ZMK1 362 aa17.05■□□□□ 0.32
TNIP1-220ENST00000610535 ERMP1Q7Z2K6 904 aa17.05■□□□□ 0.32
TNIP1-220ENST00000610535 EPHX4Q8IUS5 362 aa17.05■□□□□ 0.32
TNIP1-220ENST00000610535 CROCCP3Q8IVE0 287 aa17.05■□□□□ 0.32
TNIP1-220ENST00000610535 FUNDC1Q8IVP5 155 aa17.05■□□□□ 0.32
TNIP1-220ENST00000610535 SHCBP1Q8NEM2 672 aa17.05■□□□□ 0.32
TNIP1-220ENST00000610535 ZNF419Q96HQ0 510 aaPredicted RBP17.05■□□□□ 0.32
TNIP1-220ENST00000610535 SLC25A23Q9BV35 468 aa17.05■□□□□ 0.32
TNIP1-220ENST00000610535 VPS45Q9NRW7 570 aa17.05■□□□□ 0.32
TNIP1-220ENST00000610535 IGSF5Q9NSI5 407 aa17.05■□□□□ 0.32
TNIP1-220ENST00000610535 DDIT4Q9NX09 232 aa17.05■□□□□ 0.32
TNIP1-220ENST00000610535 FBXW11Q9UKB1 542 aa17.05■□□□□ 0.32
TNIP1-220ENST00000610535 CLEC11AQ9Y240 323 aa17.05■□□□□ 0.32
TNIP1-220ENST00000610535 DERAQ9Y315 318 aa17.05■□□□□ 0.32
TNIP1-220ENST00000610535 SCN4AP35499 1836 aa17.05■□□□□ 0.32
TNIP1-220ENST00000610535 A0A0G2JMZ2 1700 aa17.05■□□□□ 0.32
TNIP1-220ENST00000610535 LRRC37A2A6NM11 1700 aa17.05■□□□□ 0.32
TNIP1-220ENST00000610535 A8MT66 165 aa17.05■□□□□ 0.32
TNIP1-220ENST00000610535 UBFD1O14562 309 aaKnown RBP17.05■□□□□ 0.32
TNIP1-220ENST00000610535 NCAM1P13591 858 aa17.05■□□□□ 0.32
TNIP1-220ENST00000610535 NPR3P17342 541 aa17.05■□□□□ 0.32
TNIP1-220ENST00000610535 SOX4Q06945 474 aaPredicted RBP17.05■□□□□ 0.32
TNIP1-220ENST00000610535 KCTD2Q14681 263 aa17.05■□□□□ 0.32
TNIP1-220ENST00000610535 TBCELQ5QJ74 424 aa17.05■□□□□ 0.32
TNIP1-220ENST00000610535 BTBD8Q5XKL5 378 aa17.05■□□□□ 0.32
TNIP1-220ENST00000610535 CLEC20AQ6ZU45 233 aa17.05■□□□□ 0.32
TNIP1-220ENST00000610535 PATL1Q86TB9 770 aaKnown RBP17.05■□□□□ 0.32
TNIP1-220ENST00000610535 GPC2Q8N158 579 aa17.05■□□□□ 0.32
TNIP1-220ENST00000610535 TRIM8Q9BZR9 551 aa17.05■□□□□ 0.32
TNIP1-220ENST00000610535 UPF3AQ9H1J1 476 aaKnown RBP17.05■□□□□ 0.32
TNIP1-220ENST00000610535 ZNF408Q9H9D4 720 aa17.05■□□□□ 0.32
TNIP1-220ENST00000610535 OR12D3Q9UGF7 316 aa17.05■□□□□ 0.32
TNIP1-220ENST00000610535 MTSS1O43312 755 aa17.04■□□□□ 0.32
TNIP1-220ENST00000610535 STAMBPO95630 424 aa17.04■□□□□ 0.32
TNIP1-220ENST00000610535 SLC12A2P55011 1212 aa17.04■□□□□ 0.32
TNIP1-220ENST00000610535 DNAJB13P59910 316 aa17.04■□□□□ 0.32
TNIP1-220ENST00000610535 MAP7D1Q3KQU3 841 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms