RNA–Protein interactions for RNA: ENST00000604817.2

IGHV3-29-201, Transcript of immunoglobulin heavy variable 3-29 (pseudogene), humanhuman

BASIC

Gene IGHV3-29, Length 344 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-29-201ENST00000604817 GATMP50440 423 aa4.06□□□□□ -1.76
IGHV3-29-201ENST00000604817 LOXL3P58215 753 aa4.06□□□□□ -1.76
IGHV3-29-201ENST00000604817 RAP2BP61225 183 aa4.06□□□□□ -1.76
IGHV3-29-201ENST00000604817 TIAL1Q01085 375 aaKnown RBP eCLIP4.06□□□□□ -1.76
IGHV3-29-201ENST00000604817 CEBPZQ03701 1054 aaKnown RBP4.06□□□□□ -1.76
IGHV3-29-201ENST00000604817 RIN1Q13671 783 aa4.06□□□□□ -1.76
IGHV3-29-201ENST00000604817 MORF4L2Q15014 288 aa4.06□□□□□ -1.76
IGHV3-29-201ENST00000604817 SMU1Q2TAY7 513 aa4.06□□□□□ -1.76
IGHV3-29-201ENST00000604817 P3H1Q32P28 736 aa4.06□□□□□ -1.76
IGHV3-29-201ENST00000604817 ZRANB3Q5FWF4 1079 aa4.06□□□□□ -1.76
IGHV3-29-201ENST00000604817 DCAF17Q5H9S7 520 aaPredicted RBP4.06□□□□□ -1.76
IGHV3-29-201ENST00000604817 COLEC12Q5KU26 742 aa4.06□□□□□ -1.76
IGHV3-29-201ENST00000604817 GKAP1Q5VSY0 366 aaPredicted RBP4.06□□□□□ -1.76
IGHV3-29-201ENST00000604817 FAM90A2PQ658T7 463 aa4.06□□□□□ -1.76
IGHV3-29-201ENST00000604817 TBC1D9BQ66K14 1250 aa4.06□□□□□ -1.76
IGHV3-29-201ENST00000604817 KIAA0930Q6ICG6 404 aaPredicted RBP4.06□□□□□ -1.76
IGHV3-29-201ENST00000604817 CCDC144NLQ6NUI1 221 aa4.06□□□□□ -1.76
IGHV3-29-201ENST00000604817 ZNF530Q6P9A1 599 aaPredicted RBP4.06□□□□□ -1.76
IGHV3-29-201ENST00000604817 CLEC9AQ6UXN8 241 aa4.06□□□□□ -1.76
IGHV3-29-201ENST00000604817 DOK3Q7L591 496 aa4.06□□□□□ -1.76
IGHV3-29-201ENST00000604817 CTU1Q7Z7A3 348 aaKnown RBP4.06□□□□□ -1.76
IGHV3-29-201ENST00000604817 ADGRE4PQ86SQ3 457 aa4.06□□□□□ -1.76
IGHV3-29-201ENST00000604817 KBTBD6Q86V97 674 aa4.06□□□□□ -1.76
IGHV3-29-201ENST00000604817 ANKRD13BQ86YJ7 626 aa4.06□□□□□ -1.76
IGHV3-29-201ENST00000604817 ARHGAP12Q8IWW6 846 aa4.06□□□□□ -1.76
IGHV3-29-201ENST00000604817 CFAP52Q8N1V2 620 aa4.06□□□□□ -1.76
IGHV3-29-201ENST00000604817 ZNF540Q8NDQ6 660 aa4.06□□□□□ -1.76
IGHV3-29-201ENST00000604817 PSD4Q8NDX1 1056 aa4.06□□□□□ -1.76
IGHV3-29-201ENST00000604817 SHCBP1Q8NEM2 672 aa4.06□□□□□ -1.76
IGHV3-29-201ENST00000604817 TBC1D15Q8TC07 691 aa4.06□□□□□ -1.76
IGHV3-29-201ENST00000604817 ZFAND2BQ8WV99 257 aa4.06□□□□□ -1.76
IGHV3-29-201ENST00000604817 ATP6V0A1Q93050 837 aa4.06□□□□□ -1.76
IGHV3-29-201ENST00000604817 TMCO6Q96DC7 493 aa4.06□□□□□ -1.76
IGHV3-29-201ENST00000604817 PDLIM5Q96HC4 596 aaKnown RBP4.06□□□□□ -1.76
IGHV3-29-201ENST00000604817 KLHL15Q96M94 604 aa4.06□□□□□ -1.76
IGHV3-29-201ENST00000604817 HAPLN3Q96S86 360 aa4.06□□□□□ -1.76
IGHV3-29-201ENST00000604817 MAP7D2Q96T17 732 aa4.06□□□□□ -1.76
IGHV3-29-201ENST00000604817 GPHA2Q96T91 129 aa4.06□□□□□ -1.76
IGHV3-29-201ENST00000604817 NPAS1Q99742 590 aa4.06□□□□□ -1.76
IGHV3-29-201ENST00000604817 TCF25Q9BQ70 676 aa4.06□□□□□ -1.76
IGHV3-29-201ENST00000604817 STRA6Q9BX79 667 aa4.06□□□□□ -1.76
IGHV3-29-201ENST00000604817 TLR10Q9BXR5 811 aa4.06□□□□□ -1.76
IGHV3-29-201ENST00000604817 CLPBQ9H078 707 aa4.06□□□□□ -1.76
IGHV3-29-201ENST00000604817 PCED1AQ9H1Q7 454 aa4.06□□□□□ -1.76
IGHV3-29-201ENST00000604817 SERHL2Q9H4I8 314 aa4.06□□□□□ -1.76
IGHV3-29-201ENST00000604817 THAP9Q9H5L6 903 aa4.06□□□□□ -1.76
IGHV3-29-201ENST00000604817 TTC12Q9H892 705 aaPredicted RBP4.06□□□□□ -1.76
IGHV3-29-201ENST00000604817 LIN28AQ9H9Z2 209 aaKnown RBP4.06□□□□□ -1.76
IGHV3-29-201ENST00000604817 SNTG1Q9NSN8 517 aa4.06□□□□□ -1.76
IGHV3-29-201ENST00000604817 THAP1Q9NVV9 213 aa4.06□□□□□ -1.76
IGHV3-29-201ENST00000604817 PPP4R1LQ9P1A2 415 aa4.06□□□□□ -1.76
IGHV3-29-201ENST00000604817 POLKQ9UBT6 870 aa4.06□□□□□ -1.76
IGHV3-29-201ENST00000604817 TUBE1Q9UJT0 475 aa4.06□□□□□ -1.76
IGHV3-29-201ENST00000604817 OAZ3Q9UMX2 235 aa4.06□□□□□ -1.76
IGHV3-29-201ENST00000604817 SLC12A4Q9UP95 1085 aa4.06□□□□□ -1.76
IGHV3-29-201ENST00000604817 LIPT1Q9Y234 373 aa4.06□□□□□ -1.76
IGHV3-29-201ENST00000604817 BTBD3Q9Y2F9 522 aa4.06□□□□□ -1.76
IGHV3-29-201ENST00000604817 KLHL20Q9Y2M5 609 aa4.06□□□□□ -1.76
IGHV3-29-201ENST00000604817 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.06□□□□□ -1.76
IGHV3-29-201ENST00000604817 TCAF1Q9Y4C2 921 aa4.06□□□□□ -1.76
IGHV3-29-201ENST00000604817 TEX13CA0A0J9YWL9 993 aa4.05□□□□□ -1.76
IGHV3-29-201ENST00000604817 PER2O15055 1255 aa4.05□□□□□ -1.76
IGHV3-29-201ENST00000604817 NKX2-8O15522 239 aa4.05□□□□□ -1.76
IGHV3-29-201ENST00000604817 TXNL1O43396 289 aa4.05□□□□□ -1.76
IGHV3-29-201ENST00000604817 PROM1O43490 865 aa4.05□□□□□ -1.76
IGHV3-29-201ENST00000604817 LIASO43766 372 aa4.05□□□□□ -1.76
IGHV3-29-201ENST00000604817 B4GALT3O60512 393 aa4.05□□□□□ -1.76
IGHV3-29-201ENST00000604817 B4GALT4O60513 344 aa4.05□□□□□ -1.76
IGHV3-29-201ENST00000604817 PAGE4O60829 102 aa4.05□□□□□ -1.76
IGHV3-29-201ENST00000604817 STAM2O75886 525 aa4.05□□□□□ -1.76
IGHV3-29-201ENST00000604817 RECQL5O94762 991 aaPredicted RBP4.05□□□□□ -1.76
IGHV3-29-201ENST00000604817 GCNT3O95395 438 aa4.05□□□□□ -1.76
IGHV3-29-201ENST00000604817 FYNP06241 537 aa4.05□□□□□ -1.76
IGHV3-29-201ENST00000604817 TPOP07202 933 aa4.05□□□□□ -1.76
IGHV3-29-201ENST00000604817 CSF1RP07333 972 aa4.05□□□□□ -1.76
IGHV3-29-201ENST00000604817 CYP3A4P08684 503 aa4.05□□□□□ -1.76
IGHV3-29-201ENST00000604817 LYL1P12980 280 aa4.05□□□□□ -1.76
IGHV3-29-201ENST00000604817 ARSAP15289 507 aa4.05□□□□□ -1.76
IGHV3-29-201ENST00000604817 CR2P20023 1033 aa4.05□□□□□ -1.76
IGHV3-29-201ENST00000604817 TNFRSF8P28908 595 aa4.05□□□□□ -1.76
IGHV3-29-201ENST00000604817 AVPR2P30518 371 aa4.05□□□□□ -1.76
IGHV3-29-201ENST00000604817 MCM7P33993 719 aa4.05□□□□□ -1.76
IGHV3-29-201ENST00000604817 GSTM5P46439 218 aa4.05□□□□□ -1.76
IGHV3-29-201ENST00000604817 PXNP49023 591 aaPredicted RBP4.05□□□□□ -1.76
IGHV3-29-201ENST00000604817 SELENOPP49908 381 aa4.05□□□□□ -1.76
IGHV3-29-201ENST00000604817 MVDP53602 400 aa4.05□□□□□ -1.76
IGHV3-29-201ENST00000604817 PMS2P54278 862 aa4.05□□□□□ -1.76
IGHV3-29-201ENST00000604817 PRKAG1P54619 331 aa4.05□□□□□ -1.76
IGHV3-29-201ENST00000604817 EPHB4P54760 987 aa4.05□□□□□ -1.76
IGHV3-29-201ENST00000604817 FOXL2P58012 376 aa4.05□□□□□ -1.76
IGHV3-29-201ENST00000604817 PPP2CBP62714 309 aa4.05□□□□□ -1.76
IGHV3-29-201ENST00000604817 PPP2CAP67775 309 aa4.05□□□□□ -1.76
IGHV3-29-201ENST00000604817 EFNB1P98172 346 aa4.05□□□□□ -1.76
IGHV3-29-201ENST00000604817 SATB1Q01826 763 aa4.05□□□□□ -1.76
IGHV3-29-201ENST00000604817 NIPAL4Q0D2K0 466 aa4.05□□□□□ -1.76
IGHV3-29-201ENST00000604817 ITGA7Q13683 1181 aa4.05□□□□□ -1.76
IGHV3-29-201ENST00000604817 SNTB1Q13884 538 aaKnown RBP4.05□□□□□ -1.76
IGHV3-29-201ENST00000604817 TUBB2AQ13885 445 aa4.05□□□□□ -1.76
IGHV3-29-201ENST00000604817 ICAM4Q14773 271 aa4.05□□□□□ -1.76
IGHV3-29-201ENST00000604817 BMT2Q1RMZ1 405 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms