RNA–Protein interactions for RNA: ENST00000602783.1

PPFIA3-209, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 980 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-209ENST00000602783 USP12O75317 370 aa21.43■■□□□ 1.02
PPFIA3-209ENST00000602783 CSO75390 466 aaKnown RBP21.43■■□□□ 1.02
PPFIA3-209ENST00000602783 MPOP05164 745 aa21.43■■□□□ 1.02
PPFIA3-209ENST00000602783 GZMAP12544 262 aa21.43■■□□□ 1.02
PPFIA3-209ENST00000602783 XPAP23025 273 aaPredicted RBP21.43■■□□□ 1.02
PPFIA3-209ENST00000602783 FANCCQ00597 558 aa21.43■■□□□ 1.02
PPFIA3-209ENST00000602783 CCDC173Q0VFZ6 552 aa21.43■■□□□ 1.02
PPFIA3-209ENST00000602783 C1orf61Q13536 156 aa21.43■■□□□ 1.02
PPFIA3-209ENST00000602783 CYTH1Q15438 398 aa21.43■■□□□ 1.02
PPFIA3-209ENST00000602783 PARP15Q460N3 678 aa21.43■■□□□ 1.02
PPFIA3-209ENST00000602783 FIGNQ5HY92 759 aa21.43■■□□□ 1.02
PPFIA3-209ENST00000602783 UMODL1-AS1Q8N2C9 162 aa21.43■■□□□ 1.02
PPFIA3-209ENST00000602783 EXOC2Q96KP1 924 aa21.43■■□□□ 1.02
PPFIA3-209ENST00000602783 PEBP4Q96S96 227 aa21.43■■□□□ 1.02
PPFIA3-209ENST00000602783 C1QTNF7Q9BXJ2 289 aa21.43■■□□□ 1.02
PPFIA3-209ENST00000602783 CPEB1Q9BZB8 566 aaKnown RBP21.43■■□□□ 1.02
PPFIA3-209ENST00000602783 MBNL1Q9NR56 388 aaKnown RBP21.43■■□□□ 1.02
PPFIA3-209ENST00000602783 LHX3Q9UBR4 397 aa21.43■■□□□ 1.02
PPFIA3-209ENST00000602783 APOBEC3BQ9UH17 382 aaKnown RBP21.43■■□□□ 1.02
PPFIA3-209ENST00000602783 SHROOM3Q8TF72 1996 aa21.43■■□□□ 1.02
PPFIA3-209ENST00000602783 BPTFQ12830 3046 aa21.42■■□□□ 1.02
PPFIA3-209ENST00000602783 SMG1Q96Q15 3661 aaKnown RBP21.42■■□□□ 1.02
PPFIA3-209ENST00000602783 TMEM191CA6NGB0 347 aa21.42■■□□□ 1.02
PPFIA3-209ENST00000602783 TPP1O14773 563 aa21.42■■□□□ 1.02
PPFIA3-209ENST00000602783 GCATO75600 419 aa21.42■■□□□ 1.02
PPFIA3-209ENST00000602783 HTR7P34969 479 aa21.42■■□□□ 1.02
PPFIA3-209ENST00000602783 ADKP55263 362 aaKnown RBP21.42■■□□□ 1.02
PPFIA3-209ENST00000602783 YPEL5P62699 121 aa21.42■■□□□ 1.02
PPFIA3-209ENST00000602783 CA9Q16790 459 aa21.42■■□□□ 1.02
PPFIA3-209ENST00000602783 PRRT3Q5FWE3 981 aa21.42■■□□□ 1.02
PPFIA3-209ENST00000602783 FAXCQ5TGI0 409 aa21.42■■□□□ 1.02
PPFIA3-209ENST00000602783 GUSBP11Q6P575 273 aa21.42■■□□□ 1.02
PPFIA3-209ENST00000602783 EFL1Q7Z2Z2 1120 aaKnown RBP21.42■■□□□ 1.02
PPFIA3-209ENST00000602783 PHACTR4Q8IZ21 702 aa21.42■■□□□ 1.02
PPFIA3-209ENST00000602783 ARFGAP1Q8N6T3 406 aa21.42■■□□□ 1.02
PPFIA3-209ENST00000602783 NCAPGQ9BPX3 1015 aa21.42■■□□□ 1.02
PPFIA3-209ENST00000602783 SNRNP25Q9BV90 132 aaKnown RBP21.42■■□□□ 1.02
PPFIA3-209ENST00000602783 DHX35Q9H5Z1 703 aaKnown RBP21.42■■□□□ 1.02
PPFIA3-209ENST00000602783 NCKIPSDQ9NZQ3 722 aa21.42■■□□□ 1.02
PPFIA3-209ENST00000602783 UBA2Q9UBT2 640 aaPredicted RBP21.42■■□□□ 1.02
PPFIA3-209ENST00000602783 PCSK1NQ9UHG2 260 aa21.42■■□□□ 1.02
PPFIA3-209ENST00000602783 PNMA8BQ9ULN7 279 aaPredicted RBP21.42■■□□□ 1.02
PPFIA3-209ENST00000602783 SCINQ9Y6U3 715 aa21.42■■□□□ 1.02
PPFIA3-209ENST00000602783 ANKRD36A6QL64 1941 aa21.41■■□□□ 1.02
PPFIA3-209ENST00000602783 EME2A4GXA9 379 aaPredicted RBP21.41■■□□□ 1.02
PPFIA3-209ENST00000602783 EEF2KO00418 725 aaKnown RBP21.41■■□□□ 1.02
PPFIA3-209ENST00000602783 PIGNO95427 931 aa21.41■■□□□ 1.02
PPFIA3-209ENST00000602783 TGM2P21980 687 aa21.41■■□□□ 1.02
PPFIA3-209ENST00000602783 EIF4A3P38919 411 aaKnown RBP21.41■■□□□ 1.02
PPFIA3-209ENST00000602783 PBX1P40424 430 aa21.41■■□□□ 1.02
PPFIA3-209ENST00000602783 GABREP78334 506 aa21.41■■□□□ 1.02
PPFIA3-209ENST00000602783 TMEM52BQ4KMG9 183 aa21.41■■□□□ 1.02
PPFIA3-209ENST00000602783 TDRD12Q587J7 1177 aaKnown RBP21.41■■□□□ 1.02
PPFIA3-209ENST00000602783 TP53I13Q8NBR0 393 aaPredicted RBP21.41■■□□□ 1.02
PPFIA3-209ENST00000602783 FNIP1Q8TF40 1166 aa21.41■■□□□ 1.02
PPFIA3-209ENST00000602783 TRIM11Q96F44 468 aa21.41■■□□□ 1.02
PPFIA3-209ENST00000602783 ZNF578Q96N58 590 aaPredicted RBP21.41■■□□□ 1.02
PPFIA3-209ENST00000602783 UBL7Q96S82 380 aaPredicted RBP21.41■■□□□ 1.02
PPFIA3-209ENST00000602783 KCTD15Q96SI1 283 aaPredicted RBP21.41■■□□□ 1.02
PPFIA3-209ENST00000602783 SLC13A1Q9BZW2 595 aa21.41■■□□□ 1.02
PPFIA3-209ENST00000602783 MYO1AQ9UBC5 1043 aa21.41■■□□□ 1.02
PPFIA3-209ENST00000602783 J3KR12 359 aa21.4■■□□□ 1.02
PPFIA3-209ENST00000602783 TOR1BO14657 336 aa21.4■■□□□ 1.02
PPFIA3-209ENST00000602783 RNF8O76064 485 aa21.4■■□□□ 1.02
PPFIA3-209ENST00000602783 LSSP48449 732 aa21.4■■□□□ 1.02
PPFIA3-209ENST00000602783 ELP6Q0PNE2 266 aa21.4■■□□□ 1.02
PPFIA3-209ENST00000602783 NR0B2Q15466 257 aa21.4■■□□□ 1.02
PPFIA3-209ENST00000602783 ERMARDQ5T6L9 678 aa21.4■■□□□ 1.02
PPFIA3-209ENST00000602783 HGSNATQ68CP4 663 aa21.4■■□□□ 1.02
PPFIA3-209ENST00000602783 CYP4V2Q6ZWL3 525 aaPredicted RBP21.4■■□□□ 1.02
PPFIA3-209ENST00000602783 LSMEM2Q8N112 164 aa21.4■■□□□ 1.02
PPFIA3-209ENST00000602783 GLMNQ92990 594 aa21.4■■□□□ 1.02
PPFIA3-209ENST00000602783 NAF1Q96HR8 494 aaKnown RBP21.4■■□□□ 1.02
PPFIA3-209ENST00000602783 CELF6Q96J87 481 aaKnown RBP21.4■■□□□ 1.02
PPFIA3-209ENST00000602783 FCRL3Q96P31 734 aaPredicted RBP21.4■■□□□ 1.02
PPFIA3-209ENST00000602783 LGMNQ99538 433 aa21.4■■□□□ 1.02
PPFIA3-209ENST00000602783 SUV39H2Q9H5I1 410 aa21.4■■□□□ 1.02
PPFIA3-209ENST00000602783 LRRC19Q9H756 370 aa21.4■■□□□ 1.02
PPFIA3-209ENST00000602783 POLR1BQ9H9Y6 1135 aa21.4■■□□□ 1.02
PPFIA3-209ENST00000602783 COQ6Q9Y2Z9 468 aa21.4■■□□□ 1.02
PPFIA3-209ENST00000602783 RP1P56715 2156 aa21.39■■□□□ 1.01
PPFIA3-209ENST00000602783 A0A1W2PQJ5 194 aa21.39■■□□□ 1.01
PPFIA3-209ENST00000602783 EIF3CLB5ME19 914 aaKnown RBP21.39■■□□□ 1.01
PPFIA3-209ENST00000602783 GOLGA6L19H0YKK7 550 aa21.39■■□□□ 1.01
PPFIA3-209ENST00000602783 RIOK3O14730 519 aaKnown RBP21.39■■□□□ 1.01
PPFIA3-209ENST00000602783 MUSKO15146 869 aa21.39■■□□□ 1.01
PPFIA3-209ENST00000602783 PRPSAP2O60256 369 aa21.39■■□□□ 1.01
PPFIA3-209ENST00000602783 LRCH4O75427 683 aa21.39■■□□□ 1.01
PPFIA3-209ENST00000602783 ANXA6P08133 673 aa21.39■■□□□ 1.01
PPFIA3-209ENST00000602783 MYBL1P10243 752 aa21.39■■□□□ 1.01
PPFIA3-209ENST00000602783 MIPP30301 263 aa21.39■■□□□ 1.01
PPFIA3-209ENST00000602783 SUOXP51687 545 aa21.39■■□□□ 1.01
PPFIA3-209ENST00000602783 UBASH3AP57075 661 aa21.39■■□□□ 1.01
PPFIA3-209ENST00000602783 PPARDQ03181 441 aa21.39■■□□□ 1.01
PPFIA3-209ENST00000602783 TLE3Q04726 772 aa21.39■■□□□ 1.01
PPFIA3-209ENST00000602783 IRF4Q15306 451 aa21.39■■□□□ 1.01
PPFIA3-209ENST00000602783 UGP2Q16851 508 aa21.39■■□□□ 1.01
PPFIA3-209ENST00000602783 ISXQ2M1V0 245 aa21.39■■□□□ 1.01
PPFIA3-209ENST00000602783 CRTC1Q6UUV9 634 aa21.39■■□□□ 1.01
PPFIA3-209ENST00000602783 MACC1Q6ZN28 852 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms