RNA–Protein interactions for RNA: ENST00000593048.5

CIRBP-241, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 650 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-241ENST00000593048 KLHL30Q0D2K2 578 aa16.32■□□□□ 0.2
CIRBP-241ENST00000593048 ELP6Q0PNE2 266 aa16.32■□□□□ 0.2
CIRBP-241ENST00000593048 RTP5Q14D33 572 aa16.32■□□□□ 0.2
CIRBP-241ENST00000593048 PLEKHA7Q6IQ23 1121 aa16.32■□□□□ 0.2
CIRBP-241ENST00000593048 VSTM4Q8IW00 320 aa16.32■□□□□ 0.2
CIRBP-241ENST00000593048 PAF1Q8N7H5 531 aa16.32■□□□□ 0.2
CIRBP-241ENST00000593048 DCBLD1Q8N8Z6 715 aa16.32■□□□□ 0.2
CIRBP-241ENST00000593048 FAM181AQ8N9Y4 354 aa16.32■□□□□ 0.2
CIRBP-241ENST00000593048 CCDC112Q8NEF3 446 aa16.32■□□□□ 0.2
CIRBP-241ENST00000593048 EIF3CQ99613 913 aaKnown RBP16.32■□□□□ 0.2
CIRBP-241ENST00000593048 SYT11Q9BT88 431 aa16.32■□□□□ 0.2
CIRBP-241ENST00000593048 TRPM6Q9BX84 2022 aa16.32■□□□□ 0.2
CIRBP-241ENST00000593048 SUV39H2Q9H5I1 410 aa16.32■□□□□ 0.2
CIRBP-241ENST00000593048 LRRC19Q9H756 370 aa16.32■□□□□ 0.2
CIRBP-241ENST00000593048 AIPL1Q9NZN9 384 aa16.32■□□□□ 0.2
CIRBP-241ENST00000593048 NCKIPSDQ9NZQ3 722 aa16.32■□□□□ 0.2
CIRBP-241ENST00000593048 SPASTQ9UBP0 616 aa16.32■□□□□ 0.2
CIRBP-241ENST00000593048 LHX3Q9UBR4 397 aa16.32■□□□□ 0.2
CIRBP-241ENST00000593048 CNOT8Q9UFF9 292 aaKnown RBP16.32■□□□□ 0.2
CIRBP-241ENST00000593048 CSNK1G3Q9Y6M4 447 aa16.32■□□□□ 0.2
CIRBP-241ENST00000593048 IGSF10Q6WRI0 2623 aa16.32■□□□□ 0.2
CIRBP-241ENST00000593048 A0A1W2PQC6 194 aa16.31■□□□□ 0.2
CIRBP-241ENST00000593048 TMEM191CA6NGB0 347 aa16.31■□□□□ 0.2
CIRBP-241ENST00000593048 RRP8O43159 456 aaKnown RBP16.31■□□□□ 0.2
CIRBP-241ENST00000593048 OPA1O60313 960 aa16.31■□□□□ 0.2
CIRBP-241ENST00000593048 PRAMEF11O60813 436 aa16.31■□□□□ 0.2
CIRBP-241ENST00000593048 PALMO75781 387 aa16.31■□□□□ 0.2
CIRBP-241ENST00000593048 GP1BAP07359 652 aa16.31■□□□□ 0.2
CIRBP-241ENST00000593048 GZMAP12544 262 aa16.31■□□□□ 0.2
CIRBP-241ENST00000593048 IGFALSP35858 605 aa16.31■□□□□ 0.2
CIRBP-241ENST00000593048 ABCG1P45844 678 aa16.31■□□□□ 0.2
CIRBP-241ENST00000593048 PAPOLAP51003 745 aaKnown RBP16.31■□□□□ 0.2
CIRBP-241ENST00000593048 YPEL5P62699 121 aa16.31■□□□□ 0.2
CIRBP-241ENST00000593048 EIF2B5Q13144 721 aaKnown RBP16.31■□□□□ 0.2
CIRBP-241ENST00000593048 TRIM14Q14142 442 aa16.31■□□□□ 0.2
CIRBP-241ENST00000593048 CA9Q16790 459 aa16.31■□□□□ 0.2
CIRBP-241ENST00000593048 DEFB133Q30KQ1 61 aa16.31■□□□□ 0.2
CIRBP-241ENST00000593048 PPP6R3Q5H9R7 873 aaPredicted RBP16.31■□□□□ 0.2
CIRBP-241ENST00000593048 TPRG1LQ5T0D9 272 aa16.31■□□□□ 0.2
CIRBP-241ENST00000593048 FAXCQ5TGI0 409 aa16.31■□□□□ 0.2
CIRBP-241ENST00000593048 SPECC1LQ69YQ0 1117 aa16.31■□□□□ 0.2
CIRBP-241ENST00000593048 ZCCHC8Q6NZY4 707 aaKnown RBP16.31■□□□□ 0.2
CIRBP-241ENST00000593048 ERAP2Q6P179 960 aa16.31■□□□□ 0.2
CIRBP-241ENST00000593048 ZNF571Q7Z3V5 609 aaPredicted RBP16.31■□□□□ 0.2
CIRBP-241ENST00000593048 IFI44Q8TCB0 444 aa16.31■□□□□ 0.2
CIRBP-241ENST00000593048 HCAR2Q8TDS4 363 aa16.31■□□□□ 0.2
CIRBP-241ENST00000593048 GLMNQ92990 594 aa16.31■□□□□ 0.2
CIRBP-241ENST00000593048 VOPP1Q96AW1 172 aa16.31■□□□□ 0.2
CIRBP-241ENST00000593048 ZNF653Q96CK0 615 aa16.31■□□□□ 0.2
CIRBP-241ENST00000593048 DEPDC7Q96QD5 511 aa16.31■□□□□ 0.2
CIRBP-241ENST00000593048 SNRNP25Q9BV90 132 aaKnown RBP16.31■□□□□ 0.2
CIRBP-241ENST00000593048 SLC13A1Q9BZW2 595 aa16.31■□□□□ 0.2
CIRBP-241ENST00000593048 SLC39A8Q9C0K1 460 aa16.31■□□□□ 0.2
CIRBP-241ENST00000593048 SP110Q9HB58 689 aa16.31■□□□□ 0.2
CIRBP-241ENST00000593048 MYO1AQ9UBC5 1043 aa16.31■□□□□ 0.2
CIRBP-241ENST00000593048 APOBEC3BQ9UH17 382 aaKnown RBP16.31■□□□□ 0.2
CIRBP-241ENST00000593048 KLF15Q9UIH9 416 aa16.31■□□□□ 0.2
CIRBP-241ENST00000593048 SCINQ9Y6U3 715 aa16.31■□□□□ 0.2
CIRBP-241ENST00000593048 KNTC1P50748 2209 aa16.31■□□□□ 0.2
CIRBP-241ENST00000593048 CPED1A4D0V7 1026 aa16.3■□□□□ 0.2
CIRBP-241ENST00000593048 DFFAO00273 331 aa16.3■□□□□ 0.2
CIRBP-241ENST00000593048 TOR1BO14657 336 aa16.3■□□□□ 0.2
CIRBP-241ENST00000593048 MIPP30301 263 aa16.3■□□□□ 0.2
CIRBP-241ENST00000593048 EIF4A3P38919 411 aaKnown RBP16.3■□□□□ 0.2
CIRBP-241ENST00000593048 LRRC14Q15048 493 aa16.3■□□□□ 0.2
CIRBP-241ENST00000593048 CDKN3Q16667 212 aa16.3■□□□□ 0.2
CIRBP-241ENST00000593048 UGP2Q16851 508 aa16.3■□□□□ 0.2
CIRBP-241ENST00000593048 TMEM52BQ4KMG9 183 aa16.3■□□□□ 0.2
CIRBP-241ENST00000593048 SOWAHCQ53LP3 525 aaPredicted RBP16.3■□□□□ 0.2
CIRBP-241ENST00000593048 PRRT3Q5FWE3 981 aa16.3■□□□□ 0.2
CIRBP-241ENST00000593048 RFX8Q6ZV50 586 aa16.3■□□□□ 0.2
CIRBP-241ENST00000593048 MAPK15Q8TD08 544 aa16.3■□□□□ 0.2
CIRBP-241ENST00000593048 TRIM11Q96F44 468 aa16.3■□□□□ 0.2
CIRBP-241ENST00000593048 ZNF641Q96N77 438 aaPredicted RBP16.3■□□□□ 0.2
CIRBP-241ENST00000593048 KCTD15Q96SI1 283 aaPredicted RBP16.3■□□□□ 0.2
CIRBP-241ENST00000593048 CINPQ9BW66 212 aaPredicted RBP16.3■□□□□ 0.2
CIRBP-241ENST00000593048 PDFQ9HBH1 243 aa16.3■□□□□ 0.2
CIRBP-241ENST00000593048 MRPL47Q9HD33 250 aaKnown RBP16.3■□□□□ 0.2
CIRBP-241ENST00000593048 MBNL1Q9NR56 388 aaKnown RBP16.3■□□□□ 0.2
CIRBP-241ENST00000593048 SALL4Q9UJQ4 1053 aa16.3■□□□□ 0.2
CIRBP-241ENST00000593048 COQ6Q9Y2Z9 468 aa16.3■□□□□ 0.2
CIRBP-241ENST00000593048 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.3■□□□□ 0.26e-7■□□□□ 11
CIRBP-241ENST00000593048 URB1O60287 2271 aaKnown RBP16.29■□□□□ 0.2
CIRBP-241ENST00000593048 RIOK3O14730 519 aaKnown RBP16.29■□□□□ 0.2
CIRBP-241ENST00000593048 TPP1O14773 563 aa16.29■□□□□ 0.2
CIRBP-241ENST00000593048 LZTS3O60299 673 aaPredicted RBP16.29■□□□□ 0.2
CIRBP-241ENST00000593048 BRINP1O60477 761 aa16.29■□□□□ 0.2
CIRBP-241ENST00000593048 ANXA6P08133 673 aa16.29■□□□□ 0.2
CIRBP-241ENST00000593048 MYBL1P10243 752 aa16.29■□□□□ 0.2
CIRBP-241ENST00000593048 SKILP12757 684 aa16.29■□□□□ 0.2
CIRBP-241ENST00000593048 ERCC2P18074 760 aa16.29■□□□□ 0.2
CIRBP-241ENST00000593048 SERPINA4P29622 427 aa16.29■□□□□ 0.2
CIRBP-241ENST00000593048 ACTN2P35609 894 aa16.29■□□□□ 0.2
CIRBP-241ENST00000593048 ADKP55263 362 aaKnown RBP16.29■□□□□ 0.2
CIRBP-241ENST00000593048 PPARDQ03181 441 aa16.29■□□□□ 0.2
CIRBP-241ENST00000593048 C1orf61Q13536 156 aa16.29■□□□□ 0.2
CIRBP-241ENST00000593048 NR0B2Q15466 257 aa16.29■□□□□ 0.2
CIRBP-241ENST00000593048 BRAT1Q6PJG6 821 aa16.29■□□□□ 0.2
CIRBP-241ENST00000593048 SRLQ86TD4 932 aa16.29■□□□□ 0.2
CIRBP-241ENST00000593048 CAMK1DQ8IU85 385 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms