RNA–Protein interactions for RNA: ENST00000590171.1

CIRBP-226, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-226ENST00000590171 LBRQ14739 615 aaKnown RBP20.78■□□□□ 0.92
CIRBP-226ENST00000590171 SLC18A3Q16572 532 aa20.78■□□□□ 0.92
CIRBP-226ENST00000590171 PROX2Q3B8N5 592 aa20.78■□□□□ 0.92
CIRBP-226ENST00000590171 TMEM52BQ4KMG9 183 aa20.78■□□□□ 0.92
CIRBP-226ENST00000590171 PARGQ86W56 976 aa20.78■□□□□ 0.92
CIRBP-226ENST00000590171 VSTM4Q8IW00 320 aa20.78■□□□□ 0.92
CIRBP-226ENST00000590171 GALNT15Q8N3T1 639 aa20.78■□□□□ 0.92
CIRBP-226ENST00000590171 OR8K1Q8NGG5 319 aa20.78■□□□□ 0.92
CIRBP-226ENST00000590171 PCDH12Q9NPG4 1184 aa20.78■□□□□ 0.92
CIRBP-226ENST00000590171 TRPM6Q9BX84 2022 aa20.78■□□□□ 0.92
CIRBP-226ENST00000590171 SIGLEC6O43699 453 aa20.77■□□□□ 0.92
CIRBP-226ENST00000590171 PEX11BO96011 259 aa20.77■□□□□ 0.92
CIRBP-226ENST00000590171 CAPNS1P04632 268 aa20.77■□□□□ 0.92
CIRBP-226ENST00000590171 PRKCGP05129 697 aa20.77■□□□□ 0.92
CIRBP-226ENST00000590171 CKMT2P17540 419 aa20.77■□□□□ 0.92
CIRBP-226ENST00000590171 SERPINA4P29622 427 aa20.77■□□□□ 0.92
CIRBP-226ENST00000590171 SSR1P43307 286 aaKnown RBP20.77■□□□□ 0.92
CIRBP-226ENST00000590171 CDH6P55285 790 aa20.77■□□□□ 0.92
CIRBP-226ENST00000590171 NSUN2Q08J23 767 aaKnown RBP eCLIP20.77■□□□□ 0.92
CIRBP-226ENST00000590171 CFAP58Q5T655 872 aa20.77■□□□□ 0.92
CIRBP-226ENST00000590171 TMCO4Q5TGY1 634 aa20.77■□□□□ 0.92
CIRBP-226ENST00000590171 BRAT1Q6PJG6 821 aa20.77■□□□□ 0.92
CIRBP-226ENST00000590171 TP53I13Q8NBR0 393 aaPredicted RBP20.77■□□□□ 0.92
CIRBP-226ENST00000590171 OR4C6Q8NH72 309 aa20.77■□□□□ 0.92
CIRBP-226ENST00000590171 FAM71BQ8TC56 605 aa20.77■□□□□ 0.92
CIRBP-226ENST00000590171 NSMCE3Q96MG7 304 aa20.77■□□□□ 0.92
CIRBP-226ENST00000590171 ZNF599Q96NL3 588 aa20.77■□□□□ 0.92
CIRBP-226ENST00000590171 PSKH2Q96QS6 385 aa20.77■□□□□ 0.92
CIRBP-226ENST00000590171 ATP13A3Q9H7F0 1226 aa20.77■□□□□ 0.92
CIRBP-226ENST00000590171 MBNL1Q9NR56 388 aaKnown RBP20.77■□□□□ 0.92
CIRBP-226ENST00000590171 CTTNBP2NLQ9P2B4 639 aa20.77■□□□□ 0.92
CIRBP-226ENST00000590171 SEPT3Q9UH03 358 aa20.77■□□□□ 0.92
CIRBP-226ENST00000590171 COQ6Q9Y2Z9 468 aa20.77■□□□□ 0.92
CIRBP-226ENST00000590171 SSU72P8A0A1W2PR75 194 aa20.76■□□□□ 0.91
CIRBP-226ENST00000590171 FAM149AA5PLN7 773 aa20.76■□□□□ 0.91
CIRBP-226ENST00000590171 RIOK3O14730 519 aaKnown RBP20.76■□□□□ 0.91
CIRBP-226ENST00000590171 FFAR2O15552 330 aa20.76■□□□□ 0.91
CIRBP-226ENST00000590171 MAFKO60675 156 aa20.76■□□□□ 0.91
CIRBP-226ENST00000590171 CSF2P04141 144 aa20.76■□□□□ 0.91
CIRBP-226ENST00000590171 CD48P09326 243 aa20.76■□□□□ 0.91
CIRBP-226ENST00000590171 NME1P15531 152 aaKnown RBP20.76■□□□□ 0.91
CIRBP-226ENST00000590171 IL4RP24394 825 aa20.76■□□□□ 0.91
CIRBP-226ENST00000590171 MMP12P39900 470 aa20.76■□□□□ 0.91
CIRBP-226ENST00000590171 CLDN6P56747 220 aa20.76■□□□□ 0.91
CIRBP-226ENST00000590171 HNRNPKP61978 463 aaKnown RBP eCLIP20.76■□□□□ 0.918e-8■□□□□ 10.2
CIRBP-226ENST00000590171 BCL2L1Q07817 233 aa20.76■□□□□ 0.91
CIRBP-226ENST00000590171 MMRN1Q13201 1228 aa20.76■□□□□ 0.91
CIRBP-226ENST00000590171 ZNF211Q13398 564 aaPredicted RBP20.76■□□□□ 0.91
CIRBP-226ENST00000590171 KRT81Q14533 505 aa20.76■□□□□ 0.91
CIRBP-226ENST00000590171 CTNNBL1Q8WYA6 563 aaPredicted RBP20.76■□□□□ 0.91
CIRBP-226ENST00000590171 ECHDC3Q96DC8 303 aa20.76■□□□□ 0.91
CIRBP-226ENST00000590171 C1QTNF7Q9BXJ2 289 aa20.76■□□□□ 0.91
CIRBP-226ENST00000590171 ABHD10Q9NUJ1 306 aa20.76■□□□□ 0.91
CIRBP-226ENST00000590171 KLF15Q9UIH9 416 aa20.76■□□□□ 0.91
CIRBP-226ENST00000590171 ATP8A1Q9Y2Q0 1164 aa20.76■□□□□ 0.91
CIRBP-226ENST00000590171 PTPRBP23467 1997 aa20.76■□□□□ 0.91
CIRBP-226ENST00000590171 IGF2RP11717 2491 aa20.75■□□□□ 0.91
CIRBP-226ENST00000590171 PROSCO94903 275 aa20.75■□□□□ 0.91
CIRBP-226ENST00000590171 C1SP09871 688 aa20.75■□□□□ 0.91
CIRBP-226ENST00000590171 H2AFZP0C0S5 128 aa20.75■□□□□ 0.91
CIRBP-226ENST00000590171 C6P13671 934 aa20.75■□□□□ 0.91
CIRBP-226ENST00000590171 SERPINB6P35237 376 aa20.75■□□□□ 0.91
CIRBP-226ENST00000590171 GJC1P36383 396 aa20.75■□□□□ 0.91
CIRBP-226ENST00000590171 SCNN1BP51168 640 aa20.75■□□□□ 0.91
CIRBP-226ENST00000590171 ARSEP51690 589 aa20.75■□□□□ 0.91
CIRBP-226ENST00000590171 AP1S1P61966 158 aa20.75■□□□□ 0.91
CIRBP-226ENST00000590171 SEMG2Q02383 582 aa20.75■□□□□ 0.91
CIRBP-226ENST00000590171 HADHQ16836 314 aaKnown RBP20.75■□□□□ 0.91
CIRBP-226ENST00000590171 ATP13A4Q4VNC1 1196 aa20.75■□□□□ 0.91
CIRBP-226ENST00000590171 ERAP2Q6P179 960 aa20.75■□□□□ 0.91
CIRBP-226ENST00000590171 H2AFVQ71UI9 128 aa20.75■□□□□ 0.91
CIRBP-226ENST00000590171 DEF6Q9H4E7 631 aa20.75■□□□□ 0.91
CIRBP-226ENST00000590171 RCOR3Q9P2K3 495 aaPredicted RBP20.75■□□□□ 0.91
CIRBP-226ENST00000590171 UVRAGQ9P2Y5 699 aa20.75■□□□□ 0.91
CIRBP-226ENST00000590171 PLXNB3Q9ULL4 1909 aa20.74■□□□□ 0.91
CIRBP-226ENST00000590171 TTC24A2A3L6 582 aaPredicted RBP20.74■□□□□ 0.91
CIRBP-226ENST00000590171 TRAFD1O14545 582 aaPredicted RBP20.74■□□□□ 0.91
CIRBP-226ENST00000590171 MFAP3LO75121 409 aa20.74■□□□□ 0.91
CIRBP-226ENST00000590171 ACP1P24666 158 aa20.74■□□□□ 0.91
CIRBP-226ENST00000590171 LIG3P49916 1009 aa20.74■□□□□ 0.91
CIRBP-226ENST00000590171 RENBPP51606 427 aa20.74■□□□□ 0.91
CIRBP-226ENST00000590171 TAS2R40P59535 323 aa20.74■□□□□ 0.91
CIRBP-226ENST00000590171 EIF2B5Q13144 721 aaKnown RBP20.74■□□□□ 0.91
CIRBP-226ENST00000590171 ZNF235Q14590 738 aa20.74■□□□□ 0.91
CIRBP-226ENST00000590171 IRF4Q15306 451 aa20.74■□□□□ 0.91
CIRBP-226ENST00000590171 TMPRSS12Q86WS5 348 aa20.74■□□□□ 0.91
CIRBP-226ENST00000590171 PGBD5Q8N414 524 aa20.74■□□□□ 0.91
CIRBP-226ENST00000590171 ATPAF2Q8N5M1 289 aa20.74■□□□□ 0.91
CIRBP-226ENST00000590171 ZNF548Q8NEK5 533 aaPredicted RBP20.74■□□□□ 0.91
CIRBP-226ENST00000590171 CHP1Q99653 195 aa20.74■□□□□ 0.91
CIRBP-226ENST00000590171 ZNHIT6Q9NWK9 470 aaKnown RBP20.74■□□□□ 0.91
CIRBP-226ENST00000590171 NLGN3Q9NZ94 848 aa20.74■□□□□ 0.91
CIRBP-226ENST00000590171 CACNA1BQ00975 2339 aa20.73■□□□□ 0.91
CIRBP-226ENST00000590171 WDFY3Q8IZQ1 3526 aa20.73■□□□□ 0.91
CIRBP-226ENST00000590171 H3BM21 787 aa20.73■□□□□ 0.91
CIRBP-226ENST00000590171 SCAMP1O15126 338 aa20.73■□□□□ 0.91
CIRBP-226ENST00000590171 NEBLO76041 1014 aa20.73■□□□□ 0.91
CIRBP-226ENST00000590171 TMEM253P0C7T8 217 aa20.73■□□□□ 0.91
CIRBP-226ENST00000590171 CDK4P11802 303 aa20.73■□□□□ 0.91
CIRBP-226ENST00000590171 CR2P20023 1033 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms