RNA–Protein interactions for RNA: ENST00000585741.1

HMG20B-215, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-215ENST00000585741 MTRF1LQ9UGC7 380 aaKnown RBP17.09■□□□□ 0.33
HMG20B-215ENST00000585741 COL4A2P08572 1712 aa17.09■□□□□ 0.33
HMG20B-215ENST00000585741 MED19A0JLT2 244 aaPredicted RBP17.08■□□□□ 0.32
HMG20B-215ENST00000585741 C1QTNF3-AMACRE9PGA6 284 aa17.08■□□□□ 0.32
HMG20B-215ENST00000585741 AP3B1O00203 1094 aa17.08■□□□□ 0.32
HMG20B-215ENST00000585741 ALOX15BO15296 676 aa17.08■□□□□ 0.32
HMG20B-215ENST00000585741 ZNF821O75541 412 aaPredicted RBP17.08■□□□□ 0.32
HMG20B-215ENST00000585741 AP2A1O95782 977 aa17.08■□□□□ 0.32
HMG20B-215ENST00000585741 TPSB2P20231 275 aa17.08■□□□□ 0.32
HMG20B-215ENST00000585741 XPAP23025 273 aaPredicted RBP17.08■□□□□ 0.32
HMG20B-215ENST00000585741 NFKBIAP25963 317 aa17.08■□□□□ 0.32
HMG20B-215ENST00000585741 PLTPP55058 493 aa17.08■□□□□ 0.32
HMG20B-215ENST00000585741 WNT3AP56704 352 aa17.08■□□□□ 0.32
HMG20B-215ENST00000585741 CDK18Q07002 472 aa17.08■□□□□ 0.32
HMG20B-215ENST00000585741 SPARCL1Q14515 664 aa17.08■□□□□ 0.32
HMG20B-215ENST00000585741 TPSAB1Q15661 275 aa17.08■□□□□ 0.32
HMG20B-215ENST00000585741 ARMC12Q5T9G4 340 aa17.08■□□□□ 0.32
HMG20B-215ENST00000585741 FAM46CQ5VWP2 391 aa17.08■□□□□ 0.32
HMG20B-215ENST00000585741 PRPF39Q86UA1 669 aaKnown RBP17.08■□□□□ 0.32
HMG20B-215ENST00000585741 GPR161Q8N6U8 529 aaKnown RBP17.08■□□□□ 0.32
HMG20B-215ENST00000585741 CPT1BQ92523 772 aa17.08■□□□□ 0.32
HMG20B-215ENST00000585741 ERLEC1Q96DZ1 483 aa17.08■□□□□ 0.32
HMG20B-215ENST00000585741 OXNAD1Q96HP4 312 aaPredicted RBP17.08■□□□□ 0.32
HMG20B-215ENST00000585741 PPP1R16AQ96I34 528 aa17.08■□□□□ 0.32
HMG20B-215ENST00000585741 OSBPL1AQ9BXW6 950 aa17.08■□□□□ 0.32
HMG20B-215ENST00000585741 ADGRE3Q9BY15 652 aa17.08■□□□□ 0.32
HMG20B-215ENST00000585741 CPEB1Q9BZB8 566 aaKnown RBP17.08■□□□□ 0.32
HMG20B-215ENST00000585741 FAM129AQ9BZQ8 928 aa17.08■□□□□ 0.32
HMG20B-215ENST00000585741 FBRSQ9HAH7 460 aa17.08■□□□□ 0.32
HMG20B-215ENST00000585741 DLL3Q9NYJ7 618 aa17.08■□□□□ 0.32
HMG20B-215ENST00000585741 FBXO4Q9UKT5 387 aa17.08■□□□□ 0.32
HMG20B-215ENST00000585741 SHOC2Q9UQ13 582 aa17.08■□□□□ 0.32
HMG20B-215ENST00000585741 PCDHGC4Q9Y5F7 938 aa17.08■□□□□ 0.32
HMG20B-215ENST00000585741 RAI2Q9Y5P3 530 aa17.08■□□□□ 0.32
HMG20B-215ENST00000585741 NCOR2Q9Y618 2525 aa17.08■□□□□ 0.32
HMG20B-215ENST00000585741 A0A1W2PQ67 120 aa17.07■□□□□ 0.32
HMG20B-215ENST00000585741 GOLGA8MH3BSY2 632 aa17.07■□□□□ 0.32
HMG20B-215ENST00000585741 SOCS5O75159 536 aa17.07■□□□□ 0.32
HMG20B-215ENST00000585741 GJB3O75712 270 aa17.07■□□□□ 0.32
HMG20B-215ENST00000585741 PIGNO95427 931 aa17.07■□□□□ 0.32
HMG20B-215ENST00000585741 IL1BP01584 269 aa17.07■□□□□ 0.32
HMG20B-215ENST00000585741 UGT2B4P06133 528 aa17.07■□□□□ 0.32
HMG20B-215ENST00000585741 TUBBP07437 444 aa17.07■□□□□ 0.32
HMG20B-215ENST00000585741 CHRNB1P11230 501 aa17.07■□□□□ 0.32
HMG20B-215ENST00000585741 GKP32189 559 aa17.07■□□□□ 0.32
HMG20B-215ENST00000585741 KCNJ11Q14654 390 aa17.07■□□□□ 0.32
HMG20B-215ENST00000585741 ARSIQ5FYB1 569 aa17.07■□□□□ 0.32
HMG20B-215ENST00000585741 C9orf64Q5T6V5 341 aa17.07■□□□□ 0.32
HMG20B-215ENST00000585741 RNASEH2BQ5TBB1 312 aaKnown RBP17.07■□□□□ 0.32
HMG20B-215ENST00000585741 GDPD4Q6W3E5 623 aa17.07■□□□□ 0.32
HMG20B-215ENST00000585741 CAMK1DQ8IU85 385 aa17.07■□□□□ 0.32
HMG20B-215ENST00000585741 CHST14Q8NCH0 376 aa17.07■□□□□ 0.32
HMG20B-215ENST00000585741 ZNF641Q96N77 438 aaPredicted RBP17.07■□□□□ 0.32
HMG20B-215ENST00000585741 GABRG3Q99928 467 aa17.07■□□□□ 0.32
HMG20B-215ENST00000585741 MLPHQ9BV36 600 aaPredicted RBP17.07■□□□□ 0.32
HMG20B-215ENST00000585741 FRMD8Q9BZ67 464 aaPredicted RBP17.07■□□□□ 0.32
HMG20B-215ENST00000585741 SUV39H2Q9H5I1 410 aa17.07■□□□□ 0.32
HMG20B-215ENST00000585741 POLMQ9NP87 494 aaPredicted RBP17.07■□□□□ 0.32
HMG20B-215ENST00000585741 PRSS16Q9NQE7 514 aa17.07■□□□□ 0.32
HMG20B-215ENST00000585741 KPNA3O00505 521 aaPredicted RBP17.06■□□□□ 0.32
HMG20B-215ENST00000585741 LEFTY1O75610 366 aa17.06■□□□□ 0.32
HMG20B-215ENST00000585741 MMP2P08253 660 aa17.06■□□□□ 0.32
HMG20B-215ENST00000585741 IVDP26440 423 aa17.06■□□□□ 0.32
HMG20B-215ENST00000585741 POLR2LP62875 67 aaKnown RBP17.06■□□□□ 0.32
HMG20B-215ENST00000585741 ENPP2Q13822 863 aa17.06■□□□□ 0.32
HMG20B-215ENST00000585741 HIBCHQ6NVY1 386 aaPredicted RBP17.06■□□□□ 0.32
HMG20B-215ENST00000585741 CEP128Q6ZU80 1094 aa17.06■□□□□ 0.32
HMG20B-215ENST00000585741 SLC25A41Q8N5S1 370 aa17.06■□□□□ 0.32
HMG20B-215ENST00000585741 ZBTB44Q8NCP5 570 aa17.06■□□□□ 0.32
HMG20B-215ENST00000585741 TMIEQ8NEW7 156 aa17.06■□□□□ 0.32
HMG20B-215ENST00000585741 LPCAT1Q8NF37 534 aa17.06■□□□□ 0.32
HMG20B-215ENST00000585741 MYRIPQ8NFW9 859 aa17.06■□□□□ 0.32
HMG20B-215ENST00000585741 OR2T3Q8NH03 318 aa17.06■□□□□ 0.32
HMG20B-215ENST00000585741 FEM1CQ96JP0 617 aa17.06■□□□□ 0.32
HMG20B-215ENST00000585741 KLHL32Q96NJ5 620 aa17.06■□□□□ 0.32
HMG20B-215ENST00000585741 APOL2Q9BQE5 337 aa17.06■□□□□ 0.32
HMG20B-215ENST00000585741 TDRD1Q9BXT4 1180 aaKnown RBP17.06■□□□□ 0.32
HMG20B-215ENST00000585741 XAB2Q9HCS7 855 aaKnown RBP17.06■□□□□ 0.32
HMG20B-215ENST00000585741 GDF3Q9NR23 364 aa17.06■□□□□ 0.32
HMG20B-215ENST00000585741 SPATA6Q9NWH7 488 aaPredicted RBP17.06■□□□□ 0.32
HMG20B-215ENST00000585741 HCN2Q9UL51 889 aa17.06■□□□□ 0.32
HMG20B-215ENST00000585741 MMP17Q9ULZ9 603 aa17.06■□□□□ 0.32
HMG20B-215ENST00000585741 CHKBQ9Y259 395 aa17.06■□□□□ 0.32
HMG20B-215ENST00000585741 PCDHB9Q9Y5E1 797 aa17.06■□□□□ 0.32
HMG20B-215ENST00000585741 ANTXRLA6NF34 631 aa17.05■□□□□ 0.32
HMG20B-215ENST00000585741 LILRB5O75023 590 aa17.05■□□□□ 0.32
HMG20B-215ENST00000585741 USP12O75317 370 aa17.05■□□□□ 0.32
HMG20B-215ENST00000585741 NDST3O95803 873 aa17.05■□□□□ 0.32
HMG20B-215ENST00000585741 CPP00450 1065 aa17.05■□□□□ 0.32
HMG20B-215ENST00000585741 AGTP01019 485 aa17.05■□□□□ 0.32
HMG20B-215ENST00000585741 HLA-DPA1P20036 260 aa17.05■□□□□ 0.32
HMG20B-215ENST00000585741 PSMD8P48556 350 aa17.05■□□□□ 0.32
HMG20B-215ENST00000585741 ARL4CP56559 192 aa17.05■□□□□ 0.32
HMG20B-215ENST00000585741 CCDC15Q0P6D6 951 aa17.05■□□□□ 0.32
HMG20B-215ENST00000585741 CDH17Q12864 832 aa17.05■□□□□ 0.32
HMG20B-215ENST00000585741 SFSWAPQ12872 951 aaKnown RBP17.05■□□□□ 0.32
HMG20B-215ENST00000585741 TRAF2Q12933 501 aa17.05■□□□□ 0.32
HMG20B-215ENST00000585741 CAMK2GQ13555 558 aaPredicted RBP17.05■□□□□ 0.32
HMG20B-215ENST00000585741 DNAJC21Q5F1R6 531 aaKnown RBP17.05■□□□□ 0.32
HMG20B-215ENST00000585741 ANKRD22Q5VYY1 191 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms