RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 FICDQ9BVA6 458 aa18.47■□□□□ 0.55
RFFL-211ENST00000584541 WHRNQ9P202 907 aa18.47■□□□□ 0.55
RFFL-211ENST00000584541 DKK3Q9UBP4 350 aa18.47■□□□□ 0.55
RFFL-211ENST00000584541 SCML1Q9UN30 329 aa18.47■□□□□ 0.55
RFFL-211ENST00000584541 CHKBQ9Y259 395 aa18.47■□□□□ 0.55
RFFL-211ENST00000584541 PCDHB9Q9Y5E1 797 aa18.47■□□□□ 0.55
RFFL-211ENST00000584541 TNFRSF10AO00220 468 aa18.46■□□□□ 0.55
RFFL-211ENST00000584541 TRAFD1O14545 582 aaPredicted RBP18.46■□□□□ 0.55
RFFL-211ENST00000584541 SEC31AO94979 1220 aaKnown RBP18.46■□□□□ 0.55
RFFL-211ENST00000584541 PGLSO95336 258 aa18.46■□□□□ 0.55
RFFL-211ENST00000584541 NDST3O95803 873 aa18.46■□□□□ 0.55
RFFL-211ENST00000584541 ACADMP11310 421 aa18.46■□□□□ 0.55
RFFL-211ENST00000584541 HLA-DPA1P20036 260 aa18.46■□□□□ 0.55
RFFL-211ENST00000584541 XPAP23025 273 aaPredicted RBP18.46■□□□□ 0.55
RFFL-211ENST00000584541 ITGB7P26010 798 aa18.46■□□□□ 0.55
RFFL-211ENST00000584541 IVDP26440 423 aa18.46■□□□□ 0.55
RFFL-211ENST00000584541 SLC8A1P32418 973 aa18.46■□□□□ 0.55
RFFL-211ENST00000584541 MAGEA6P43360 314 aa18.46■□□□□ 0.55
RFFL-211ENST00000584541 CXCL12P48061 93 aa18.46■□□□□ 0.55
RFFL-211ENST00000584541 CCR3P51677 355 aa18.46■□□□□ 0.55
RFFL-211ENST00000584541 RPL26P61254 145 aaKnown RBP18.46■□□□□ 0.55
RFFL-211ENST00000584541 RPS14P62263 151 aaKnown RBP18.46■□□□□ 0.55
RFFL-211ENST00000584541 ZBTB16Q05516 673 aa18.46■□□□□ 0.55
RFFL-211ENST00000584541 MTAPQ13126 283 aa18.46■□□□□ 0.55
RFFL-211ENST00000584541 IHHQ14623 411 aa18.46■□□□□ 0.55
RFFL-211ENST00000584541 KCNJ11Q14654 390 aa18.46■□□□□ 0.55
RFFL-211ENST00000584541 MORF4L2Q15014 288 aa18.46■□□□□ 0.55
RFFL-211ENST00000584541 TTC31Q49AM3 519 aaPredicted RBP18.46■□□□□ 0.55
RFFL-211ENST00000584541 RNASEH2BQ5TBB1 312 aaKnown RBP18.46■□□□□ 0.55
RFFL-211ENST00000584541 HOOK3Q86VS8 718 aa18.46■□□□□ 0.55
RFFL-211ENST00000584541 PGBD3Q8N328 593 aa18.46■□□□□ 0.55
RFFL-211ENST00000584541 RMDN1Q96DB5 314 aa18.46■□□□□ 0.55
RFFL-211ENST00000584541 ECHDC3Q96DC8 303 aa18.46■□□□□ 0.55
RFFL-211ENST00000584541 SIPA1Q96FS4 1042 aa18.46■□□□□ 0.55
RFFL-211ENST00000584541 MKRN2Q9H000 416 aaKnown RBP18.46■□□□□ 0.55
RFFL-211ENST00000584541 EPB41L5Q9HCM4 733 aa18.46■□□□□ 0.55
RFFL-211ENST00000584541 CD248Q9HCU0 757 aa18.46■□□□□ 0.55
RFFL-211ENST00000584541 FAM114A2Q9NRY5 505 aa18.46■□□□□ 0.55
RFFL-211ENST00000584541 BCCIPQ9P287 314 aaKnown RBP eCLIP18.46■□□□□ 0.55
RFFL-211ENST00000584541 ANAPC5Q9UJX4 755 aa18.46■□□□□ 0.55
RFFL-211ENST00000584541 SARDHQ9UL12 918 aa18.46■□□□□ 0.55
RFFL-211ENST00000584541 RPL26L1Q9UNX3 145 aaKnown RBP18.46■□□□□ 0.55
RFFL-211ENST00000584541 LOC285095A0A1B0GVY8 99 aa18.45■□□□□ 0.54
RFFL-211ENST00000584541 AP3B1O00203 1094 aa18.45■□□□□ 0.54
RFFL-211ENST00000584541 PI15O43692 258 aa18.45■□□□□ 0.54
RFFL-211ENST00000584541 SUN1O94901 812 aa18.45■□□□□ 0.54
RFFL-211ENST00000584541 AGTP01019 485 aa18.45■□□□□ 0.54
RFFL-211ENST00000584541 ITGA8P53708 1063 aa18.45■□□□□ 0.54
RFFL-211ENST00000584541 CAV1Q03135 178 aa18.45■□□□□ 0.54
RFFL-211ENST00000584541 SPARCL1Q14515 664 aa18.45■□□□□ 0.54
RFFL-211ENST00000584541 POM121L1PQ3SYA9 428 aa18.45■□□□□ 0.54
RFFL-211ENST00000584541 FBXL19Q6PCT2 694 aa18.45■□□□□ 0.54
RFFL-211ENST00000584541 KIAA1324Q6UXG2 1013 aaKnown RBP18.45■□□□□ 0.54
RFFL-211ENST00000584541 CACUL1Q86Y37 369 aa18.45■□□□□ 0.54
RFFL-211ENST00000584541 IFT20Q8IY31 132 aa18.45■□□□□ 0.54
RFFL-211ENST00000584541 NAT8LQ8N9F0 302 aa18.45■□□□□ 0.54
RFFL-211ENST00000584541 DNAAF3Q8N9W5 541 aa18.45■□□□□ 0.54
RFFL-211ENST00000584541 LPCAT1Q8NF37 534 aa18.45■□□□□ 0.54
RFFL-211ENST00000584541 HMGB4Q8WW32 186 aa18.45■□□□□ 0.54
RFFL-211ENST00000584541 MRGPRX1Q96LB2 322 aa18.45■□□□□ 0.54
RFFL-211ENST00000584541 OMDQ99983 421 aa18.45■□□□□ 0.54
RFFL-211ENST00000584541 POLR3BQ9NW08 1133 aaPredicted RBP18.45■□□□□ 0.54
RFFL-211ENST00000584541 SPATA6Q9NWH7 488 aaPredicted RBP18.45■□□□□ 0.54
RFFL-211ENST00000584541 DLGAP2Q9P1A6 1054 aa18.45■□□□□ 0.54
RFFL-211ENST00000584541 DMGDHQ9UI17 866 aaKnown RBP18.45■□□□□ 0.54
RFFL-211ENST00000584541 PHTF1Q9UMS5 762 aa18.45■□□□□ 0.54
RFFL-211ENST00000584541 SHOC2Q9UQ13 582 aa18.45■□□□□ 0.54
RFFL-211ENST00000584541 NCOR1O75376 2440 aa18.45■□□□□ 0.54
RFFL-211ENST00000584541 TSPAN11A1L157 253 aa18.44■□□□□ 0.54
RFFL-211ENST00000584541 C16orf96A6NNT2 1141 aa18.44■□□□□ 0.54
RFFL-211ENST00000584541 MID1O15344 667 aa18.44■□□□□ 0.54
RFFL-211ENST00000584541 FZD6O60353 706 aa18.44■□□□□ 0.54
RFFL-211ENST00000584541 APBB3O95704 486 aa18.44■□□□□ 0.54
RFFL-211ENST00000584541 FGF1P05230 155 aa18.44■□□□□ 0.54
RFFL-211ENST00000584541 GABRG2P18507 467 aa18.44■□□□□ 0.54
RFFL-211ENST00000584541 NDUFV2P19404 249 aa18.44■□□□□ 0.54
RFFL-211ENST00000584541 ADRA1AP35348 466 aa18.44■□□□□ 0.54
RFFL-211ENST00000584541 GRIA4P48058 902 aa18.44■□□□□ 0.54
RFFL-211ENST00000584541 SUOXP51687 545 aa18.44■□□□□ 0.54
RFFL-211ENST00000584541 NEK3P51956 506 aa18.44■□□□□ 0.54
RFFL-211ENST00000584541 GALNT3Q14435 633 aa18.44■□□□□ 0.54
RFFL-211ENST00000584541 SLC1A5Q15758 541 aa18.44■□□□□ 0.54
RFFL-211ENST00000584541 HIBCHQ6NVY1 386 aaPredicted RBP18.44■□□□□ 0.54
RFFL-211ENST00000584541 RANBP10Q6VN20 620 aa18.44■□□□□ 0.54
RFFL-211ENST00000584541 MAMSTRQ6ZN01 415 aa18.44■□□□□ 0.54
RFFL-211ENST00000584541 BMP8AQ7Z5Y6 402 aa18.44■□□□□ 0.54
RFFL-211ENST00000584541 TTC7BQ86TV6 843 aa18.44■□□□□ 0.54
RFFL-211ENST00000584541 SLC25A41Q8N5S1 370 aa18.44■□□□□ 0.54
RFFL-211ENST00000584541 CAMKK1Q8N5S9 505 aa18.44■□□□□ 0.54
RFFL-211ENST00000584541 MCUQ8NE86 351 aa18.44■□□□□ 0.54
RFFL-211ENST00000584541 GANCQ8TET4 914 aa18.44■□□□□ 0.54
RFFL-211ENST00000584541 SPOCK2Q92563 424 aa18.44■□□□□ 0.54
RFFL-211ENST00000584541 VOPP1Q96AW1 172 aa18.44■□□□□ 0.54
RFFL-211ENST00000584541 HHIPQ96QV1 700 aa18.44■□□□□ 0.54
RFFL-211ENST00000584541 TRIB3Q96RU7 358 aa18.44■□□□□ 0.54
RFFL-211ENST00000584541 HINFPQ9BQA5 517 aa18.44■□□□□ 0.54
RFFL-211ENST00000584541 APOL2Q9BQE5 337 aa18.44■□□□□ 0.54
RFFL-211ENST00000584541 FRMD8Q9BZ67 464 aaPredicted RBP18.44■□□□□ 0.54
RFFL-211ENST00000584541 PABPC3Q9H361 631 aaKnown RBP18.44■□□□□ 0.54
RFFL-211ENST00000584541 NCKAP1Q9Y2A7 1128 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms