RNA–Protein interactions for RNA: ENST00000582448.5

SS18-221, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-221ENST00000582448 CDO1Q16878 200 aa10.49□□□□□ -0.73
SS18-221ENST00000582448 AADACL2Q6P093 401 aa10.49□□□□□ -0.73
SS18-221ENST00000582448 LETMD1Q6P1Q0 360 aa10.49□□□□□ -0.73
SS18-221ENST00000582448 SPOCD1Q6ZMY3 1216 aa10.49□□□□□ -0.73
SS18-221ENST00000582448 RELL1Q8IUW5 271 aa10.49□□□□□ -0.73
SS18-221ENST00000582448 SYT12Q8IV01 421 aa10.49□□□□□ -0.73
SS18-221ENST00000582448 MRPL41Q8IXM3 137 aaKnown RBP10.49□□□□□ -0.73
SS18-221ENST00000582448 ALLCQ8N6M5 410 aa10.49□□□□□ -0.73
SS18-221ENST00000582448 PRELID2Q8N945 189 aa10.49□□□□□ -0.73
SS18-221ENST00000582448 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.49□□□□□ -0.73
SS18-221ENST00000582448 FAM172AQ8WUF8 416 aa10.49□□□□□ -0.73
SS18-221ENST00000582448 IRGQQ8WZA9 623 aa10.49□□□□□ -0.73
SS18-221ENST00000582448 HSPH1Q92598 858 aa10.49□□□□□ -0.73
SS18-221ENST00000582448 ERLEC1Q96DZ1 483 aa10.49□□□□□ -0.73
SS18-221ENST00000582448 SLITRK1Q96PX8 696 aa10.49□□□□□ -0.73
SS18-221ENST00000582448 HEMGNQ9BXL5 484 aa10.49□□□□□ -0.73
SS18-221ENST00000582448 FRMD8P1Q9BZ68 369 aaPredicted RBP10.49□□□□□ -0.73
SS18-221ENST00000582448 LRRC19Q9H756 370 aa10.49□□□□□ -0.73
SS18-221ENST00000582448 PNPLA8Q9NP80 782 aa10.49□□□□□ -0.73
SS18-221ENST00000582448 CNGB3Q9NQW8 809 aa10.49□□□□□ -0.73
SS18-221ENST00000582448 GDF3Q9NR23 364 aa10.49□□□□□ -0.73
SS18-221ENST00000582448 RRN3Q9NYV6 651 aa10.49□□□□□ -0.73
SS18-221ENST00000582448 PCSK1NQ9UHG2 260 aa10.49□□□□□ -0.73
SS18-221ENST00000582448 PCYOX1Q9UHG3 505 aa10.49□□□□□ -0.73
SS18-221ENST00000582448 MBD1Q9UIS9 605 aaPredicted RBP10.49□□□□□ -0.73
SS18-221ENST00000582448 EFR3BQ9Y2G0 817 aa10.49□□□□□ -0.73
SS18-221ENST00000582448 MSRB2Q9Y3D2 182 aa10.49□□□□□ -0.73
SS18-221ENST00000582448 NEUROG3Q9Y4Z2 214 aa10.49□□□□□ -0.73
SS18-221ENST00000582448 CHD6Q8TD26 2715 aa10.49□□□□□ -0.73
SS18-221ENST00000582448 SGK1O00141 431 aa10.48□□□□□ -0.73
SS18-221ENST00000582448 NDC80O14777 642 aa10.48□□□□□ -0.73
SS18-221ENST00000582448 TTI1O43156 1089 aa10.48□□□□□ -0.73
SS18-221ENST00000582448 ZBED1O96006 694 aa10.48□□□□□ -0.73
SS18-221ENST00000582448 APODP05090 189 aa10.48□□□□□ -0.73
SS18-221ENST00000582448 P2RY2P41231 377 aa10.48□□□□□ -0.73
SS18-221ENST00000582448 MATKP42679 507 aa10.48□□□□□ -0.73
SS18-221ENST00000582448 SULT1E1P49888 294 aa10.48□□□□□ -0.73
SS18-221ENST00000582448 MRPS21P82921 87 aaKnown RBP10.48□□□□□ -0.73
SS18-221ENST00000582448 SLC25A11Q02978 314 aaKnown RBP10.48□□□□□ -0.73
SS18-221ENST00000582448 TFDP2Q14188 446 aa10.48□□□□□ -0.73
SS18-221ENST00000582448 CCNG2Q16589 344 aa10.48□□□□□ -0.73
SS18-221ENST00000582448 CCDC14Q49A88 953 aa10.48□□□□□ -0.73
SS18-221ENST00000582448 LYSMD4Q5XG99 296 aa10.48□□□□□ -0.73
SS18-221ENST00000582448 KAZNQ674X7 775 aa10.48□□□□□ -0.73
SS18-221ENST00000582448 FAM171BQ6P995 826 aa10.48□□□□□ -0.73
SS18-221ENST00000582448 STRADAQ7RTN6 431 aa10.48□□□□□ -0.73
SS18-221ENST00000582448 GSTA5Q7RTV2 222 aa10.48□□□□□ -0.73
SS18-221ENST00000582448 JAMLQ86YT9 394 aa10.48□□□□□ -0.73
SS18-221ENST00000582448 ATL2Q8NHH9 583 aa10.48□□□□□ -0.73
SS18-221ENST00000582448 CCHCR1Q8TD31 782 aa10.48□□□□□ -0.73
SS18-221ENST00000582448 TEKT4Q8WW24 435 aa10.48□□□□□ -0.73
SS18-221ENST00000582448 TRMT2BQ96GJ1 504 aaKnown RBP10.48□□□□□ -0.73
SS18-221ENST00000582448 CCDC114Q96M63 670 aa10.48□□□□□ -0.73
SS18-221ENST00000582448 CFAP57Q96MR6 1250 aa10.48□□□□□ -0.73
SS18-221ENST00000582448 ERP44Q9BS26 406 aa10.48□□□□□ -0.73
SS18-221ENST00000582448 CALN1Q9BXU9 219 aa10.48□□□□□ -0.73
SS18-221ENST00000582448 POPDC2Q9HBU9 364 aa10.48□□□□□ -0.73
SS18-221ENST00000582448 MBNL3Q9NUK0 354 aaKnown RBP10.48□□□□□ -0.73
SS18-221ENST00000582448 TMEM51Q9NW97 253 aa10.48□□□□□ -0.73
SS18-221ENST00000582448 SMPD4Q9NXE4 827 aa10.48□□□□□ -0.73
SS18-221ENST00000582448 EVLQ9UI08 416 aaPredicted RBP10.48□□□□□ -0.73
SS18-221ENST00000582448 SCN1AP35498 2009 aa10.48□□□□□ -0.73
SS18-221ENST00000582448 BAHCC1Q9P281 2608 aa10.47□□□□□ -0.73
SS18-221ENST00000582448 hCG_1818297A0A087WSY0 165 aa10.47□□□□□ -0.73
SS18-221ENST00000582448 TCRBV21S2A2A0A5A6 115 aa10.47□□□□□ -0.73
SS18-221ENST00000582448 TAF4O00268 1085 aa10.47□□□□□ -0.73
SS18-221ENST00000582448 PAX4O43316 350 aa10.47□□□□□ -0.73
SS18-221ENST00000582448 OPHN1O60890 802 aa10.47□□□□□ -0.73
SS18-221ENST00000582448 F9P00740 461 aa10.47□□□□□ -0.73
SS18-221ENST00000582448 BDNFP23560 247 aa10.47□□□□□ -0.73
SS18-221ENST00000582448 KDELR1P24390 212 aa10.47□□□□□ -0.73
SS18-221ENST00000582448 CDKN2BP42772 138 aa10.47□□□□□ -0.73
SS18-221ENST00000582448 CDH6P55285 790 aa10.47□□□□□ -0.73
SS18-221ENST00000582448 FAM193AP78312 1265 aa10.47□□□□□ -0.73
SS18-221ENST00000582448 MRPS25P82663 173 aaKnown RBP10.47□□□□□ -0.73
SS18-221ENST00000582448 ZXDBP98169 803 aa10.47□□□□□ -0.73
SS18-221ENST00000582448 KDSRQ06136 332 aa10.47□□□□□ -0.73
SS18-221ENST00000582448 MESP2Q0VG99 397 aa10.47□□□□□ -0.73
SS18-221ENST00000582448 IFRD2Q12894 506 aaPredicted RBP10.47□□□□□ -0.73
SS18-221ENST00000582448 CALCOCO2Q13137 446 aa10.47□□□□□ -0.73
SS18-221ENST00000582448 BYSLQ13895 437 aaKnown RBP10.47□□□□□ -0.73
SS18-221ENST00000582448 DHCR24Q15392 516 aa10.47□□□□□ -0.73
SS18-221ENST00000582448 SMTNL2Q2TAL5 461 aa10.47□□□□□ -0.73
SS18-221ENST00000582448 ARL13BQ3SXY8 428 aa10.47□□□□□ -0.73
SS18-221ENST00000582448 SLC25A52Q3SY17 297 aa10.47□□□□□ -0.73
SS18-221ENST00000582448 DCAF6Q58WW2 860 aa10.47□□□□□ -0.73
SS18-221ENST00000582448 EOGTQ5NDL2 527 aa10.47□□□□□ -0.73
SS18-221ENST00000582448 BEND6Q5SZJ8 279 aaPredicted RBP10.47□□□□□ -0.73
SS18-221ENST00000582448 VSTM1Q6UX27 236 aa10.47□□□□□ -0.73
SS18-221ENST00000582448 MFSD7Q6UXD7 560 aa10.47□□□□□ -0.73
SS18-221ENST00000582448 PAQR9Q6ZVX9 377 aa10.47□□□□□ -0.73
SS18-221ENST00000582448 CDH24Q86UP0 819 aa10.47□□□□□ -0.73
SS18-221ENST00000582448 RFX6Q8HWS3 928 aa10.47□□□□□ -0.73
SS18-221ENST00000582448 MCATQ8IVS2 390 aaKnown RBP10.47□□□□□ -0.73
SS18-221ENST00000582448 ADGRG2Q8IZP9 1017 aa10.47□□□□□ -0.73
SS18-221ENST00000582448 NAT16Q8N8M0 369 aa10.47□□□□□ -0.73
SS18-221ENST00000582448 IL17RCQ8NAC3 791 aa10.47□□□□□ -0.73
SS18-221ENST00000582448 BBOF1Q8ND07 529 aa10.47□□□□□ -0.73
SS18-221ENST00000582448 OR2I1PQ8NGU4 316 aa10.47□□□□□ -0.73
SS18-221ENST00000582448 C1orf54Q8WWF1 131 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms