RNA–Protein interactions for RNA: ENST00000576334.1

LITAF-219, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-219ENST00000576334 CSPG4P5Q96PW8 444 aa12.01□□□□□ -0.49
LITAF-219ENST00000576334 CPEB1Q9BZB8 566 aaKnown RBP12.01□□□□□ -0.49
LITAF-219ENST00000576334 SP110Q9HB58 689 aa12.01□□□□□ -0.49
LITAF-219ENST00000576334 MRPL47Q9HD33 250 aaKnown RBP12.01□□□□□ -0.49
LITAF-219ENST00000576334 PCDH12Q9NPG4 1184 aa12.01□□□□□ -0.49
LITAF-219ENST00000576334 NENFQ9UMX5 172 aa12.01□□□□□ -0.49
LITAF-219ENST00000576334 LUC7L2Q9Y383 392 aaKnown RBP12.01□□□□□ -0.49
LITAF-219ENST00000576334 U3KQA8 63 aa12.01□□□□□ -0.49
LITAF-219ENST00000576334 TMEM8BA6NDV4 472 aa12□□□□□ -0.49
LITAF-219ENST00000576334 TM7SF2O76062 418 aa12□□□□□ -0.49
LITAF-219ENST00000576334 PEX11BO96011 259 aa12□□□□□ -0.49
LITAF-219ENST00000576334 CYP1A2P05177 515 aa12□□□□□ -0.49
LITAF-219ENST00000576334 CELA2BP08218 269 aaPredicted RBP12□□□□□ -0.49
LITAF-219ENST00000576334 HTR7P34969 479 aa12□□□□□ -0.49
LITAF-219ENST00000576334 PCK1P35558 622 aa12□□□□□ -0.49
LITAF-219ENST00000576334 GJC1P36383 396 aa12□□□□□ -0.49
LITAF-219ENST00000576334 EIF4A3P38919 411 aaKnown RBP12□□□□□ -0.49
LITAF-219ENST00000576334 RAD51Q06609 339 aa12□□□□□ -0.49
LITAF-219ENST00000576334 TARDBPQ13148 414 aaKnown RBP eCLIP12□□□□□ -0.49
LITAF-219ENST00000576334 C1orf61Q13536 156 aa12□□□□□ -0.49
LITAF-219ENST00000576334 IRF4Q15306 451 aa12□□□□□ -0.49
LITAF-219ENST00000576334 DPYSL2Q16555 572 aa12□□□□□ -0.49
LITAF-219ENST00000576334 UGP2Q16851 508 aa12□□□□□ -0.49
LITAF-219ENST00000576334 ALKBH5Q6P6C2 394 aaKnown RBP12□□□□□ -0.49
LITAF-219ENST00000576334 C19orf48Q6RUI8 117 aa12□□□□□ -0.49
LITAF-219ENST00000576334 RNF214Q8ND24 703 aa12□□□□□ -0.49
LITAF-219ENST00000576334 ZNF548Q8NEK5 533 aaPredicted RBP12□□□□□ -0.49
LITAF-219ENST00000576334 OR4C6Q8NH72 309 aa12□□□□□ -0.49
LITAF-219ENST00000576334 CXorf40AQ8TE69 158 aa12□□□□□ -0.49
LITAF-219ENST00000576334 SYN2Q92777 582 aaPredicted RBP12□□□□□ -0.49
LITAF-219ENST00000576334 TRIM11Q96F44 468 aa12□□□□□ -0.49
LITAF-219ENST00000576334 CINPQ9BW66 212 aaPredicted RBP12□□□□□ -0.49
LITAF-219ENST00000576334 CCDC86Q9H6F5 360 aaKnown RBP12□□□□□ -0.49
LITAF-219ENST00000576334 PCDH18Q9HCL0 1135 aa12□□□□□ -0.49
LITAF-219ENST00000576334 DKK3Q9UBP4 350 aa12□□□□□ -0.49
LITAF-219ENST00000576334 IPO11Q9UI26 975 aaKnown RBP12□□□□□ -0.49
LITAF-219ENST00000576334 RAXQ9Y2V3 346 aa12□□□□□ -0.49
LITAF-219ENST00000576334 BPTFQ12830 3046 aa12□□□□□ -0.49
LITAF-219ENST00000576334 APC2O95996 2303 aa12□□□□□ -0.49
LITAF-219ENST00000576334 ZFYVE26Q68DK2 2539 aa12□□□□□ -0.49
LITAF-219ENST00000576334 A0A0U1RQS6 177 aa11.99□□□□□ -0.49
LITAF-219ENST00000576334 TSPAN11A1L157 253 aa11.99□□□□□ -0.49
LITAF-219ENST00000576334 H3BRJ5 948 aa11.99□□□□□ -0.49
LITAF-219ENST00000576334 K7ESM1 405 aa11.99□□□□□ -0.49
LITAF-219ENST00000576334 RIOK3O14730 519 aaKnown RBP11.99□□□□□ -0.49
LITAF-219ENST00000576334 GCATO75600 419 aa11.99□□□□□ -0.49
LITAF-219ENST00000576334 MAP3K6O95382 1288 aa11.99□□□□□ -0.49
LITAF-219ENST00000576334 CSF2P04141 144 aa11.99□□□□□ -0.49
LITAF-219ENST00000576334 C6P13671 934 aa11.99□□□□□ -0.49
LITAF-219ENST00000576334 JUPP14923 745 aa11.99□□□□□ -0.49
LITAF-219ENST00000576334 JUNDP17535 347 aa11.99□□□□□ -0.49
LITAF-219ENST00000576334 XPAP23025 273 aaPredicted RBP11.99□□□□□ -0.49
LITAF-219ENST00000576334 IL4RP24394 825 aa11.99□□□□□ -0.49
LITAF-219ENST00000576334 SSR1P43307 286 aaKnown RBP11.99□□□□□ -0.49
LITAF-219ENST00000576334 RABIFP47224 123 aa11.99□□□□□ -0.49
LITAF-219ENST00000576334 HCAR3P49019 387 aa11.99□□□□□ -0.49
LITAF-219ENST00000576334 LIG3P49916 1009 aa11.99□□□□□ -0.49
LITAF-219ENST00000576334 SCNN1BP51168 640 aa11.99□□□□□ -0.49
LITAF-219ENST00000576334 MAXP61244 160 aa11.99□□□□□ -0.49
LITAF-219ENST00000576334 DAB2P98082 770 aa11.99□□□□□ -0.49
LITAF-219ENST00000576334 INSM1Q01101 510 aaPredicted RBP11.99□□□□□ -0.49
LITAF-219ENST00000576334 IL10RBQ08334 325 aa11.99□□□□□ -0.49
LITAF-219ENST00000576334 RALGDSQ12967 914 aa11.99□□□□□ -0.49
LITAF-219ENST00000576334 ZNF211Q13398 564 aaPredicted RBP11.99□□□□□ -0.49
LITAF-219ENST00000576334 WSCD2Q2TBF2 565 aa11.99□□□□□ -0.49
LITAF-219ENST00000576334 DEFB133Q30KQ1 61 aa11.99□□□□□ -0.49
LITAF-219ENST00000576334 TMEM52BQ4KMG9 183 aa11.99□□□□□ -0.49
LITAF-219ENST00000576334 CRTC1Q6UUV9 634 aa11.99□□□□□ -0.49
LITAF-219ENST00000576334 PARGQ86W56 976 aa11.99□□□□□ -0.49
LITAF-219ENST00000576334 PELI3Q8N2H9 469 aa11.99□□□□□ -0.49
LITAF-219ENST00000576334 GALNT15Q8N3T1 639 aa11.99□□□□□ -0.49
LITAF-219ENST00000576334 PLA2G15Q8NCC3 412 aa11.99□□□□□ -0.49
LITAF-219ENST00000576334 LMX1AQ8TE12 382 aa11.99□□□□□ -0.49
LITAF-219ENST00000576334 APOLD1Q96LR9 279 aa11.99□□□□□ -0.49
LITAF-219ENST00000576334 SMIM14Q96QK8 99 aa11.99□□□□□ -0.49
LITAF-219ENST00000576334 OR1A2Q9Y585 309 aa11.99□□□□□ -0.49
LITAF-219ENST00000576334 PCDHGA1Q9Y5H4 931 aa11.99□□□□□ -0.49
LITAF-219ENST00000576334 BZW2Q9Y6E2 419 aaKnown RBP11.99□□□□□ -0.49
LITAF-219ENST00000576334 KNTC1P50748 2209 aa11.99□□□□□ -0.49
LITAF-219ENST00000576334 ASXL3Q9C0F0 2248 aa11.98□□□□□ -0.49
LITAF-219ENST00000576334 LRP4O75096 1905 aa11.98□□□□□ -0.49
LITAF-219ENST00000576334 EIF3CLB5ME19 914 aaKnown RBP11.98□□□□□ -0.49
LITAF-219ENST00000576334 MAFKO60675 156 aa11.98□□□□□ -0.49
LITAF-219ENST00000576334 NME1P15531 152 aaKnown RBP11.98□□□□□ -0.49
LITAF-219ENST00000576334 GM2AP17900 193 aa11.98□□□□□ -0.49
LITAF-219ENST00000576334 ACP1P24666 158 aa11.98□□□□□ -0.49
LITAF-219ENST00000576334 MMP12P39900 470 aa11.98□□□□□ -0.49
LITAF-219ENST00000576334 ARL4AP40617 200 aa11.98□□□□□ -0.49
LITAF-219ENST00000576334 CDH6P55285 790 aa11.98□□□□□ -0.49
LITAF-219ENST00000576334 TAS2R40P59535 323 aa11.98□□□□□ -0.49
LITAF-219ENST00000576334 PIGHQ14442 188 aaPredicted RBP11.98□□□□□ -0.49
LITAF-219ENST00000576334 LBRQ14739 615 aaKnown RBP11.98□□□□□ -0.49
LITAF-219ENST00000576334 BOLA3Q53S33 107 aa11.98□□□□□ -0.49
LITAF-219ENST00000576334 TMCO3Q6UWJ1 677 aa11.98□□□□□ -0.49
LITAF-219ENST00000576334 PSTKQ8IV42 348 aaKnown RBP11.98□□□□□ -0.49
LITAF-219ENST00000576334 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.98□□□□□ -0.49
LITAF-219ENST00000576334 DENND6BQ8NEG7 585 aa11.98□□□□□ -0.49
LITAF-219ENST00000576334 ZNF564Q8TBZ8 553 aaPredicted RBP11.98□□□□□ -0.49
LITAF-219ENST00000576334 ASB12Q8WXK4 309 aa11.98□□□□□ -0.49
LITAF-219ENST00000576334 TSACCQ96A04 125 aaPredicted RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms