RNA–Protein interactions for RNA: ENST00000570749.5

TRIM25-204, Transcript of tripartite motif containing 25, humanhuman

TSL 2

Gene TRIM25, Length 614 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-204ENST00000570749 NIPA2Q8N8Q9 360 aa9.8□□□□□ -0.84
TRIM25-204ENST00000570749 DCBLD1Q8N8Z6 715 aa9.8□□□□□ -0.84
TRIM25-204ENST00000570749 ZNF548Q8NEK5 533 aaPredicted RBP9.8□□□□□ -0.84
TRIM25-204ENST00000570749 OR6K2Q8NGY2 324 aa9.8□□□□□ -0.84
TRIM25-204ENST00000570749 TEKT4Q8WW24 435 aa9.8□□□□□ -0.84
TRIM25-204ENST00000570749 CENPTQ96BT3 561 aa9.8□□□□□ -0.84
TRIM25-204ENST00000570749 DEPDC7Q96QD5 511 aa9.8□□□□□ -0.84
TRIM25-204ENST00000570749 FUCA2Q9BTY2 467 aa9.8□□□□□ -0.84
TRIM25-204ENST00000570749 SNRNP25Q9BV90 132 aaKnown RBP9.8□□□□□ -0.84
TRIM25-204ENST00000570749 CINPQ9BW66 212 aaPredicted RBP9.8□□□□□ -0.84
TRIM25-204ENST00000570749 SUV39H2Q9H5I1 410 aa9.8□□□□□ -0.84
TRIM25-204ENST00000570749 TAS2R14Q9NYV8 317 aa9.8□□□□□ -0.84
TRIM25-204ENST00000570749 RCOR3Q9P2K3 495 aaPredicted RBP9.8□□□□□ -0.84
TRIM25-204ENST00000570749 LHX3Q9UBR4 397 aa9.8□□□□□ -0.84
TRIM25-204ENST00000570749 SEPT3Q9UH03 358 aa9.8□□□□□ -0.84
TRIM25-204ENST00000570749 LHX6Q9UPM6 363 aa9.8□□□□□ -0.84
TRIM25-204ENST00000570749 GPSM3Q9Y4H4 160 aa9.8□□□□□ -0.84
TRIM25-204ENST00000570749 LRP4O75096 1905 aa9.8□□□□□ -0.84
TRIM25-204ENST00000570749 TMCO5BA8MYB1 307 aa9.79□□□□□ -0.84
TRIM25-204ENST00000570749 DDX3XO00571 662 aaKnown RBP eCLIP9.79□□□□□ -0.84
TRIM25-204ENST00000570749 TRIM38O00635 465 aa9.79□□□□□ -0.84
TRIM25-204ENST00000570749 AQP9O43315 295 aa9.79□□□□□ -0.84
TRIM25-204ENST00000570749 SDC3O75056 442 aa9.79□□□□□ -0.84
TRIM25-204ENST00000570749 LRCH4O75427 683 aa9.79□□□□□ -0.84
TRIM25-204ENST00000570749 PALMO75781 387 aa9.79□□□□□ -0.84
TRIM25-204ENST00000570749 SERPING1P05155 500 aa9.79□□□□□ -0.84
TRIM25-204ENST00000570749 ALPIP09923 528 aa9.79□□□□□ -0.84
TRIM25-204ENST00000570749 JUNDP17535 347 aa9.79□□□□□ -0.84
TRIM25-204ENST00000570749 ERCC2P18074 760 aa9.79□□□□□ -0.84
TRIM25-204ENST00000570749 KELP23276 732 aa9.79□□□□□ -0.84
TRIM25-204ENST00000570749 MIPP30301 263 aa9.79□□□□□ -0.84
TRIM25-204ENST00000570749 ZBED6P86452 979 aa9.79□□□□□ -0.84
TRIM25-204ENST00000570749 LRRC14Q15048 493 aa9.79□□□□□ -0.84
TRIM25-204ENST00000570749 TDRD12Q587J7 1177 aaKnown RBP9.79□□□□□ -0.84
TRIM25-204ENST00000570749 LVRNQ6Q4G3 990 aa9.79□□□□□ -0.84
TRIM25-204ENST00000570749 OR6C4Q8NGE1 309 aa9.79□□□□□ -0.84
TRIM25-204ENST00000570749 MDM1Q8TC05 714 aa9.79□□□□□ -0.84
TRIM25-204ENST00000570749 NSMCE1Q8WV22 266 aa9.79□□□□□ -0.84
TRIM25-204ENST00000570749 SCG3Q8WXD2 468 aaKnown RBP9.79□□□□□ -0.84
TRIM25-204ENST00000570749 NAT6Q93015 286 aa9.79□□□□□ -0.84
TRIM25-204ENST00000570749 PSKH2Q96QS6 385 aa9.79□□□□□ -0.84
TRIM25-204ENST00000570749 IL12RB2Q99665 862 aa9.79□□□□□ -0.84
TRIM25-204ENST00000570749 SLC13A1Q9BZW2 595 aa9.79□□□□□ -0.84
TRIM25-204ENST00000570749 APOBEC3BQ9UH17 382 aaKnown RBP9.79□□□□□ -0.84
TRIM25-204ENST00000570749 IP6K2Q9UHH9 426 aa9.79□□□□□ -0.84
TRIM25-204ENST00000570749 CA5BQ9Y2D0 317 aa9.79□□□□□ -0.84
TRIM25-204ENST00000570749 ATP8A1Q9Y2Q0 1164 aa9.79□□□□□ -0.84
TRIM25-204ENST00000570749 ACTL7AQ9Y615 435 aa9.79□□□□□ -0.84
TRIM25-204ENST00000570749 BPTFQ12830 3046 aa9.78□□□□□ -0.84
TRIM25-204ENST00000570749 SHROOM3Q8TF72 1996 aa9.78□□□□□ -0.84
TRIM25-204ENST00000570749 LMO7DNF2Z398 122 aa9.78□□□□□ -0.84
TRIM25-204ENST00000570749 K7ESM1 405 aa9.78□□□□□ -0.84
TRIM25-204ENST00000570749 RNF103O00237 685 aa9.78□□□□□ -0.84
TRIM25-204ENST00000570749 TAF4O00268 1085 aa9.78□□□□□ -0.84
TRIM25-204ENST00000570749 RAD51BO15315 384 aa9.78□□□□□ -0.84
TRIM25-204ENST00000570749 RRP8O43159 456 aaKnown RBP9.78□□□□□ -0.84
TRIM25-204ENST00000570749 SPINT1O43278 529 aa9.78□□□□□ -0.84
TRIM25-204ENST00000570749 SOCS5O75159 536 aa9.78□□□□□ -0.84
TRIM25-204ENST00000570749 TCEA3O75764 348 aa9.78□□□□□ -0.84
TRIM25-204ENST00000570749 GIMD1P0DJR0 217 aa9.78□□□□□ -0.84
TRIM25-204ENST00000570749 KRT10P13645 584 aa9.78□□□□□ -0.84
TRIM25-204ENST00000570749 TIMP2P16035 220 aa9.78□□□□□ -0.84
TRIM25-204ENST00000570749 GKP32189 559 aa9.78□□□□□ -0.84
TRIM25-204ENST00000570749 ACTN2P35609 894 aa9.78□□□□□ -0.84
TRIM25-204ENST00000570749 IGFALSP35858 605 aa9.78□□□□□ -0.84
TRIM25-204ENST00000570749 MMP12P39900 470 aa9.78□□□□□ -0.84
TRIM25-204ENST00000570749 MLLT3P42568 568 aaPredicted RBP9.78□□□□□ -0.84
TRIM25-204ENST00000570749 PAPOLAP51003 745 aaKnown RBP9.78□□□□□ -0.84
TRIM25-204ENST00000570749 CDH6P55285 790 aa9.78□□□□□ -0.84
TRIM25-204ENST00000570749 UBASH3AP57075 661 aa9.78□□□□□ -0.84
TRIM25-204ENST00000570749 INSM1Q01101 510 aaPredicted RBP9.78□□□□□ -0.84
TRIM25-204ENST00000570749 BCL2L1Q07817 233 aa9.78□□□□□ -0.84
TRIM25-204ENST00000570749 CYP4F3Q08477 520 aa9.78□□□□□ -0.84
TRIM25-204ENST00000570749 TARDBPQ13148 414 aaKnown RBP eCLIP9.78□□□□□ -0.84
TRIM25-204ENST00000570749 MTM1Q13496 603 aa9.78□□□□□ -0.84
TRIM25-204ENST00000570749 DPYSQ14117 519 aa9.78□□□□□ -0.84
TRIM25-204ENST00000570749 ELOCQ15369 112 aa9.78□□□□□ -0.84
TRIM25-204ENST00000570749 CYTH1Q15438 398 aa9.78□□□□□ -0.84
TRIM25-204ENST00000570749 PPP6R3Q5H9R7 873 aaPredicted RBP9.78□□□□□ -0.84
TRIM25-204ENST00000570749 TMCO3Q6UWJ1 677 aa9.78□□□□□ -0.84
TRIM25-204ENST00000570749 LRRC69Q6ZNQ3 347 aa9.78□□□□□ -0.84
TRIM25-204ENST00000570749 SRLQ86TD4 932 aa9.78□□□□□ -0.84
TRIM25-204ENST00000570749 TP53I13Q8NBR0 393 aaPredicted RBP9.78□□□□□ -0.84
TRIM25-204ENST00000570749 SNIP1Q8TAD8 396 aaKnown RBP9.78□□□□□ -0.84
TRIM25-204ENST00000570749 VOPP1Q96AW1 172 aa9.78□□□□□ -0.84
TRIM25-204ENST00000570749 ECHDC3Q96DC8 303 aa9.78□□□□□ -0.84
TRIM25-204ENST00000570749 APOLD1Q96LR9 279 aa9.78□□□□□ -0.84
TRIM25-204ENST00000570749 KCTD15Q96SI1 283 aaPredicted RBP9.78□□□□□ -0.84
TRIM25-204ENST00000570749 SLC39A8Q9C0K1 460 aa9.78□□□□□ -0.84
TRIM25-204ENST00000570749 ABCG4Q9H172 646 aa9.78□□□□□ -0.84
TRIM25-204ENST00000570749 UCKL1Q9NWZ5 548 aa9.78□□□□□ -0.84
TRIM25-204ENST00000570749 PCSK1NQ9UHG2 260 aa9.78□□□□□ -0.84
TRIM25-204ENST00000570749 CAPN11Q9UMQ6 739 aa9.78□□□□□ -0.84
TRIM25-204ENST00000570749 LUC7L2Q9Y383 392 aaKnown RBP9.78□□□□□ -0.84
TRIM25-204ENST00000570749 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.78□□□□□ -0.847e-9■■■□□ 16
TRIM25-204ENST00000570749 CACNA1GO43497 2377 aa9.78□□□□□ -0.84
TRIM25-204ENST00000570749 CELSR3Q9NYQ7 3312 aa9.77□□□□□ -0.84
TRIM25-204ENST00000570749 EME2A4GXA9 379 aaPredicted RBP9.77□□□□□ -0.85
TRIM25-204ENST00000570749 FAM149AA5PLN7 773 aa9.77□□□□□ -0.85
TRIM25-204ENST00000570749 J3KR12 359 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms