RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 EIF2B5Q13144 721 aaKnown RBP7.9□□□□□ -1.14
CDH3-209ENST00000569080 ZNF211Q13398 564 aaPredicted RBP7.9□□□□□ -1.14
CDH3-209ENST00000569080 PIGHQ14442 188 aaPredicted RBP7.9□□□□□ -1.14
CDH3-209ENST00000569080 RFTN1Q14699 578 aaPredicted RBP7.9□□□□□ -1.14
CDH3-209ENST00000569080 AGERQ15109 404 aa7.9□□□□□ -1.14
CDH3-209ENST00000569080 IRF4Q15306 451 aa7.9□□□□□ -1.14
CDH3-209ENST00000569080 UGP2Q16851 508 aa7.9□□□□□ -1.14
CDH3-209ENST00000569080 TMEM52BQ4KMG9 183 aa7.9□□□□□ -1.14
CDH3-209ENST00000569080 ZNF542PQ5EBM4 170 aa7.9□□□□□ -1.14
CDH3-209ENST00000569080 ALKBH5Q6P6C2 394 aaKnown RBP7.9□□□□□ -1.14
CDH3-209ENST00000569080 PARGQ86W56 976 aa7.9□□□□□ -1.14
CDH3-209ENST00000569080 PROSER1Q86XN7 944 aa7.9□□□□□ -1.14
CDH3-209ENST00000569080 DCP2Q8IU60 420 aaKnown RBP7.9□□□□□ -1.14
CDH3-209ENST00000569080 CAMK1DQ8IU85 385 aa7.9□□□□□ -1.14
CDH3-209ENST00000569080 ZNF548Q8NEK5 533 aaPredicted RBP7.9□□□□□ -1.14
CDH3-209ENST00000569080 OR4C6Q8NH72 309 aa7.9□□□□□ -1.14
CDH3-209ENST00000569080 HCAR2Q8TDS4 363 aa7.9□□□□□ -1.14
CDH3-209ENST00000569080 CPLX3Q8WVH0 158 aa7.9□□□□□ -1.14
CDH3-209ENST00000569080 RFFLQ8WZ73 363 aa7.9□□□□□ -1.14
CDH3-209ENST00000569080 ZNF641Q96N77 438 aaPredicted RBP7.9□□□□□ -1.14
CDH3-209ENST00000569080 PSKH2Q96QS6 385 aa7.9□□□□□ -1.14
CDH3-209ENST00000569080 TUBGCP5Q96RT8 1024 aa7.9□□□□□ -1.14
CDH3-209ENST00000569080 NCAPGQ9BPX3 1015 aa7.9□□□□□ -1.14
CDH3-209ENST00000569080 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.9□□□□□ -1.14
CDH3-209ENST00000569080 PACSIN1Q9BY11 444 aa7.9□□□□□ -1.14
CDH3-209ENST00000569080 SUV39H2Q9H5I1 410 aa7.9□□□□□ -1.14
CDH3-209ENST00000569080 ZWILCHQ9H900 591 aa7.9□□□□□ -1.14
CDH3-209ENST00000569080 PCDH12Q9NPG4 1184 aa7.9□□□□□ -1.14
CDH3-209ENST00000569080 MBNL1Q9NR56 388 aaKnown RBP7.9□□□□□ -1.14
CDH3-209ENST00000569080 DKK4Q9UBT3 224 aa7.9□□□□□ -1.14
CDH3-209ENST00000569080 IPO11Q9UI26 975 aaKnown RBP7.9□□□□□ -1.14
CDH3-209ENST00000569080 LUC7L2Q9Y383 392 aaKnown RBP7.9□□□□□ -1.14
CDH3-209ENST00000569080 GOLGA4Q13439 2230 aaKnown RBP7.9□□□□□ -1.15
CDH3-209ENST00000569080 SHROOM3Q8TF72 1996 aa7.9□□□□□ -1.15
CDH3-209ENST00000569080 MYLKQ15746 1914 aa7.9□□□□□ -1.15
CDH3-209ENST00000569080 BPTFQ12830 3046 aa7.89□□□□□ -1.15
CDH3-209ENST00000569080 DFFAO00273 331 aa7.89□□□□□ -1.15
CDH3-209ENST00000569080 RIOK3O14730 519 aaKnown RBP7.89□□□□□ -1.15
CDH3-209ENST00000569080 FPGTO14772 594 aa7.89□□□□□ -1.15
CDH3-209ENST00000569080 MFSD11O43934 449 aa7.89□□□□□ -1.15
CDH3-209ENST00000569080 MAFKO60675 156 aa7.89□□□□□ -1.15
CDH3-209ENST00000569080 MMP20O60882 483 aa7.89□□□□□ -1.15
CDH3-209ENST00000569080 MFAP3LO75121 409 aa7.89□□□□□ -1.15
CDH3-209ENST00000569080 PALMO75781 387 aa7.89□□□□□ -1.15
CDH3-209ENST00000569080 PRKCGP05129 697 aa7.89□□□□□ -1.15
CDH3-209ENST00000569080 C1SP09871 688 aa7.89□□□□□ -1.15
CDH3-209ENST00000569080 C6P13671 934 aa7.89□□□□□ -1.15
CDH3-209ENST00000569080 CKMT2P17540 419 aa7.89□□□□□ -1.15
CDH3-209ENST00000569080 AMPD1P23109 780 aa7.89□□□□□ -1.15
CDH3-209ENST00000569080 EIF4A3P38919 411 aaKnown RBP7.89□□□□□ -1.15
CDH3-209ENST00000569080 TAS2R40P59535 323 aa7.89□□□□□ -1.15
CDH3-209ENST00000569080 RAD51Q06609 339 aa7.89□□□□□ -1.15
CDH3-209ENST00000569080 NSUN2Q08J23 767 aaKnown RBP eCLIP7.89□□□□□ -1.15
CDH3-209ENST00000569080 SLC10A7Q0GE19 358 aa7.89□□□□□ -1.15
CDH3-209ENST00000569080 ILKQ13418 452 aa7.89□□□□□ -1.15
CDH3-209ENST00000569080 PDE1CQ14123 709 aaPredicted RBP7.89□□□□□ -1.15
CDH3-209ENST00000569080 GRM3Q14832 879 aa7.89□□□□□ -1.15
CDH3-209ENST00000569080 SLC18A3Q16572 532 aa7.89□□□□□ -1.15
CDH3-209ENST00000569080 WSCD2Q2TBF2 565 aa7.89□□□□□ -1.15
CDH3-209ENST00000569080 BOLA3Q53S33 107 aa7.89□□□□□ -1.15
CDH3-209ENST00000569080 CCDC122Q5T0U0 273 aa7.89□□□□□ -1.15
CDH3-209ENST00000569080 TMCO4Q5TGY1 634 aa7.89□□□□□ -1.15
CDH3-209ENST00000569080 SPECC1LQ69YQ0 1117 aa7.89□□□□□ -1.15
CDH3-209ENST00000569080 BRAT1Q6PJG6 821 aa7.89□□□□□ -1.15
CDH3-209ENST00000569080 MACC1Q6ZN28 852 aa7.89□□□□□ -1.15
CDH3-209ENST00000569080 NYAP1Q6ZVC0 841 aa7.89□□□□□ -1.15
CDH3-209ENST00000569080 TTC7BQ86TV6 843 aa7.89□□□□□ -1.15
CDH3-209ENST00000569080 VPS36Q86VN1 386 aa7.89□□□□□ -1.15
CDH3-209ENST00000569080 VSTM4Q8IW00 320 aa7.89□□□□□ -1.15
CDH3-209ENST00000569080 RBFAQ8N0V3 343 aa7.89□□□□□ -1.15
CDH3-209ENST00000569080 GALNT15Q8N3T1 639 aa7.89□□□□□ -1.15
CDH3-209ENST00000569080 PGBD5Q8N414 524 aa7.89□□□□□ -1.15
CDH3-209ENST00000569080 LZTR1Q8N653 840 aa7.89□□□□□ -1.15
CDH3-209ENST00000569080 ZNF564Q8TBZ8 553 aaPredicted RBP7.89□□□□□ -1.15
CDH3-209ENST00000569080 MDM1Q8TC05 714 aa7.89□□□□□ -1.15
CDH3-209ENST00000569080 HSPH1Q92598 858 aa7.89□□□□□ -1.15
CDH3-209ENST00000569080 FAF2Q96CS3 445 aa7.89□□□□□ -1.15
CDH3-209ENST00000569080 ZNF599Q96NL3 588 aa7.89□□□□□ -1.15
CDH3-209ENST00000569080 MGME1Q9BQP7 344 aa7.89□□□□□ -1.15
CDH3-209ENST00000569080 WRAP53Q9BUR4 548 aaKnown RBP7.89□□□□□ -1.15
CDH3-209ENST00000569080 CINPQ9BW66 212 aaPredicted RBP7.89□□□□□ -1.15
CDH3-209ENST00000569080 TCEAL2Q9H3H9 227 aaPredicted RBP7.89□□□□□ -1.15
CDH3-209ENST00000569080 SP110Q9HB58 689 aa7.89□□□□□ -1.15
CDH3-209ENST00000569080 DNAJC28Q9NX36 388 aa7.89□□□□□ -1.15
CDH3-209ENST00000569080 NLGN3Q9NZ94 848 aa7.89□□□□□ -1.15
CDH3-209ENST00000569080 RCOR3Q9P2K3 495 aaPredicted RBP7.89□□□□□ -1.15
CDH3-209ENST00000569080 IP6K2Q9UHH9 426 aa7.89□□□□□ -1.15
CDH3-209ENST00000569080 ATP8A1Q9Y2Q0 1164 aa7.89□□□□□ -1.15
CDH3-209ENST00000569080 COQ6Q9Y2Z9 468 aa7.89□□□□□ -1.15
CDH3-209ENST00000569080 SSU72P8A0A1W2PR75 194 aa7.88□□□□□ -1.15
CDH3-209ENST00000569080 TTC24A2A3L6 582 aaPredicted RBP7.88□□□□□ -1.15
CDH3-209ENST00000569080 K7ESM1 405 aa7.88□□□□□ -1.15
CDH3-209ENST00000569080 NEMP1O14524 444 aa7.88□□□□□ -1.15
CDH3-209ENST00000569080 SCAMP1O15126 338 aa7.88□□□□□ -1.15
CDH3-209ENST00000569080 FFAR2O15552 330 aa7.88□□□□□ -1.15
CDH3-209ENST00000569080 DAPK3O43293 454 aa7.88□□□□□ -1.15
CDH3-209ENST00000569080 HTRA2O43464 458 aaPredicted RBP7.88□□□□□ -1.15
CDH3-209ENST00000569080 LZTS3O60299 673 aaPredicted RBP7.88□□□□□ -1.15
CDH3-209ENST00000569080 NEBLO76041 1014 aa7.88□□□□□ -1.15
CDH3-209ENST00000569080 TM7SF2O76062 418 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms