RNA–Protein interactions for RNA: ENST00000568770.5

CDH13-211, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-211ENST00000568770 THAP10Q9P2Z0 257 aaPredicted RBP5.88□□□□□ -1.47
CDH13-211ENST00000568770 LSM7Q9UK45 103 aaKnown RBP5.88□□□□□ -1.47
CDH13-211ENST00000568770 FBXO10Q9UK96 956 aa5.88□□□□□ -1.47
CDH13-211ENST00000568770 ZKSCAN5Q9Y2L8 839 aa5.88□□□□□ -1.47
CDH13-211ENST00000568770 PCDHGA1Q9Y5H4 931 aa5.88□□□□□ -1.47
CDH13-211ENST00000568770 DOPEY2Q9Y3R5 2298 aa5.88□□□□□ -1.47
CDH13-211ENST00000568770 A0A1B0GTQ1 180 aa5.87□□□□□ -1.47
CDH13-211ENST00000568770 B8ZZF3 427 aa5.87□□□□□ -1.47
CDH13-211ENST00000568770 PAPSS1O43252 624 aaPredicted RBP5.87□□□□□ -1.47
CDH13-211ENST00000568770 DFNA5O60443 496 aa5.87□□□□□ -1.47
CDH13-211ENST00000568770 TSPAN3O60637 253 aa5.87□□□□□ -1.47
CDH13-211ENST00000568770 BEST1O76090 585 aa5.87□□□□□ -1.47
CDH13-211ENST00000568770 FSBPO95073 299 aa5.87□□□□□ -1.47
CDH13-211ENST00000568770 SEMA4FO95754 770 aa5.87□□□□□ -1.47
CDH13-211ENST00000568770 C1SP09871 688 aa5.87□□□□□ -1.47
CDH13-211ENST00000568770 CDK4P11802 303 aa5.87□□□□□ -1.47
CDH13-211ENST00000568770 BPIP17213 487 aa5.87□□□□□ -1.47
CDH13-211ENST00000568770 PRKCHP24723 683 aa5.87□□□□□ -1.47
CDH13-211ENST00000568770 CD27P26842 260 aa5.87□□□□□ -1.47
CDH13-211ENST00000568770 MC4RP32245 332 aa5.87□□□□□ -1.47
CDH13-211ENST00000568770 ACTN2P35609 894 aa5.87□□□□□ -1.47
CDH13-211ENST00000568770 SOX5P35711 763 aa5.87□□□□□ -1.47
CDH13-211ENST00000568770 ATP5C1P36542 298 aaKnown RBP5.87□□□□□ -1.47
CDH13-211ENST00000568770 ACADVLP49748 655 aa5.87□□□□□ -1.47
CDH13-211ENST00000568770 ITGA1P56199 1179 aa5.87□□□□□ -1.47
CDH13-211ENST00000568770 TNNC1P63316 161 aa5.87□□□□□ -1.47
CDH13-211ENST00000568770 NFKB2Q00653 900 aa5.87□□□□□ -1.47
CDH13-211ENST00000568770 GOLGA8FQ08AF8 430 aa5.87□□□□□ -1.47
CDH13-211ENST00000568770 GOLGA8DPQ0D2H9 430 aa5.87□□□□□ -1.47
CDH13-211ENST00000568770 ZNF234Q14588 700 aa5.87□□□□□ -1.47
CDH13-211ENST00000568770 SURF1Q15526 300 aa5.87□□□□□ -1.47
CDH13-211ENST00000568770 TBC1D25Q3MII6 688 aa5.87□□□□□ -1.47
CDH13-211ENST00000568770 WDR72Q3MJ13 1102 aa5.87□□□□□ -1.47
CDH13-211ENST00000568770 TMEM215Q68D42 235 aa5.87□□□□□ -1.47
CDH13-211ENST00000568770 SERPINA13PQ6UXR4 307 aa5.87□□□□□ -1.47
CDH13-211ENST00000568770 PAQR9Q6ZVX9 377 aa5.87□□□□□ -1.47
CDH13-211ENST00000568770 TRAPPC11Q7Z392 1133 aa5.87□□□□□ -1.47
CDH13-211ENST00000568770 ERICH1Q86X53 443 aa5.87□□□□□ -1.47
CDH13-211ENST00000568770 CBWD2Q8IUF1 395 aa5.87□□□□□ -1.47
CDH13-211ENST00000568770 WDR49Q8IV35 697 aa5.87□□□□□ -1.47
CDH13-211ENST00000568770 EID2Q8N6I1 236 aa5.87□□□□□ -1.47
CDH13-211ENST00000568770 OR2W6PQ8NHA6 318 aa5.87□□□□□ -1.47
CDH13-211ENST00000568770 FNIP1Q8TF40 1166 aa5.87□□□□□ -1.47
CDH13-211ENST00000568770 UCMAQ8WVF2 138 aa5.87□□□□□ -1.47
CDH13-211ENST00000568770 ASB15Q8WXK1 588 aa5.87□□□□□ -1.47
CDH13-211ENST00000568770 SORCS1Q8WY21 1168 aa5.87□□□□□ -1.47
CDH13-211ENST00000568770 NAF1Q96HR8 494 aaKnown RBP5.87□□□□□ -1.47
CDH13-211ENST00000568770 PIWIL1Q96J94 861 aaKnown RBP5.87□□□□□ -1.47
CDH13-211ENST00000568770 LGMNQ99538 433 aa5.87□□□□□ -1.47
CDH13-211ENST00000568770 FGFBP2Q9BYJ0 223 aa5.87□□□□□ -1.47
CDH13-211ENST00000568770 MS4A5Q9H3V2 200 aa5.87□□□□□ -1.47
CDH13-211ENST00000568770 CPNE5Q9HCH3 593 aa5.87□□□□□ -1.47
CDH13-211ENST00000568770 DMAP1Q9NPF5 467 aaPredicted RBP5.87□□□□□ -1.47
CDH13-211ENST00000568770 TLR8Q9NR97 1041 aaKnown RBP5.87□□□□□ -1.47
CDH13-211ENST00000568770 COMMD8Q9NX08 183 aa5.87□□□□□ -1.47
CDH13-211ENST00000568770 OSER1Q9NX31 292 aa5.87□□□□□ -1.47
CDH13-211ENST00000568770 SEL1LQ9UBV2 794 aa5.87□□□□□ -1.47
CDH13-211ENST00000568770 CNOT6Q9ULM6 557 aaKnown RBP5.87□□□□□ -1.47
CDH13-211ENST00000568770 SLC27A6Q9Y2P4 619 aa5.87□□□□□ -1.47
CDH13-211ENST00000568770 KCTD3Q9Y597 815 aa5.87□□□□□ -1.47
CDH13-211ENST00000568770 USP9XQ93008 2570 aaPredicted RBP5.87□□□□□ -1.47
CDH13-211ENST00000568770 UNC79Q9P2D8 2635 aa5.86□□□□□ -1.47
CDH13-211ENST00000568770 ATP8B3O60423 1300 aa5.86□□□□□ -1.47
CDH13-211ENST00000568770 TCAF2A6NFQ2 919 aa5.86□□□□□ -1.47
CDH13-211ENST00000568770 ZNF233A6NK53 670 aa5.86□□□□□ -1.47
CDH13-211ENST00000568770 NPIPB6E9PJ23 425 aa5.86□□□□□ -1.47
CDH13-211ENST00000568770 MDM4O15151 490 aa5.86□□□□□ -1.47
CDH13-211ENST00000568770 STC2O76061 302 aa5.86□□□□□ -1.47
CDH13-211ENST00000568770 FKBP9O95302 570 aa5.86□□□□□ -1.47
CDH13-211ENST00000568770 TSPAN15O95858 294 aa5.86□□□□□ -1.47
CDH13-211ENST00000568770 MPIG6BO95866 241 aa5.86□□□□□ -1.47
CDH13-211ENST00000568770 IL18BPO95998 194 aa5.86□□□□□ -1.47
CDH13-211ENST00000568770 PENKP01210 267 aaPredicted RBP5.86□□□□□ -1.47
CDH13-211ENST00000568770 KLKB1P03952 638 aa5.86□□□□□ -1.47
CDH13-211ENST00000568770 FAM163BP0C2L3 166 aa5.86□□□□□ -1.47
CDH13-211ENST00000568770 DLATP10515 647 aaKnown RBP5.86□□□□□ -1.47
CDH13-211ENST00000568770 KRT10P13645 584 aa5.86□□□□□ -1.47
CDH13-211ENST00000568770 C6P13671 934 aa5.86□□□□□ -1.47
CDH13-211ENST00000568770 GAP43P17677 238 aa5.86□□□□□ -1.47
CDH13-211ENST00000568770 TNNI1P19237 187 aa5.86□□□□□ -1.47
CDH13-211ENST00000568770 ABCB4P21439 1286 aa5.86□□□□□ -1.47
CDH13-211ENST00000568770 SDHAP31040 664 aa5.86□□□□□ -1.47
CDH13-211ENST00000568770 LONP1P36776 959 aaKnown RBP5.86□□□□□ -1.47
CDH13-211ENST00000568770 BCAT1P54687 386 aa5.86□□□□□ -1.47
CDH13-211ENST00000568770 C21orf59P57076 290 aa5.86□□□□□ -1.47
CDH13-211ENST00000568770 TMPRSS3P57727 454 aa5.86□□□□□ -1.47
CDH13-211ENST00000568770 MYL6P60660 151 aa5.86□□□□□ -1.47
CDH13-211ENST00000568770 RHDQ02161 417 aa5.86□□□□□ -1.47
CDH13-211ENST00000568770 SRSF1Q07955 248 aaKnown RBP eCLIP5.86□□□□□ -1.47
CDH13-211ENST00000568770 SHBQ15464 509 aa5.86□□□□□ -1.47
CDH13-211ENST00000568770 ARHGAP40Q5TG30 622 aa5.86□□□□□ -1.47
CDH13-211ENST00000568770 ESRP1Q6NXG1 681 aaKnown RBP5.86□□□□□ -1.47
CDH13-211ENST00000568770 FKBP9P1Q75LS8 142 aa5.86□□□□□ -1.47
CDH13-211ENST00000568770 ANKS1BQ7Z6G8 1248 aa5.86□□□□□ -1.47
CDH13-211ENST00000568770 ZC3H18Q86VM9 953 aaKnown RBP5.86□□□□□ -1.47
CDH13-211ENST00000568770 FUKQ8N0W3 1084 aa5.86□□□□□ -1.47
CDH13-211ENST00000568770 ZNF366Q8N895 744 aa5.86□□□□□ -1.47
CDH13-211ENST00000568770 LINC00482Q8N8I6 264 aa5.86□□□□□ -1.47
CDH13-211ENST00000568770 ZMIZ2Q8NF64 920 aa5.86□□□□□ -1.47
CDH13-211ENST00000568770 OR2T3Q8NH03 318 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms