RNA–Protein interactions for RNA: ENST00000567843.1

GTF3C1-208, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 474 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-208ENST00000567843 CASC3O15234 703 aaKnown RBP12.34□□□□□ -0.43
GTF3C1-208ENST00000567843 MT-CO3P00414 261 aa12.34□□□□□ -0.43
GTF3C1-208ENST00000567843 CKMT1AP12532 417 aa12.34□□□□□ -0.43
GTF3C1-208ENST00000567843 GZMAP12544 262 aa12.34□□□□□ -0.43
GTF3C1-208ENST00000567843 AMPD1P23109 780 aa12.34□□□□□ -0.43
GTF3C1-208ENST00000567843 IL1R2P27930 398 aa12.34□□□□□ -0.43
GTF3C1-208ENST00000567843 ADKP55263 362 aaKnown RBP12.34□□□□□ -0.43
GTF3C1-208ENST00000567843 ILKQ13418 452 aa12.34□□□□□ -0.43
GTF3C1-208ENST00000567843 IRF4Q15306 451 aa12.34□□□□□ -0.43
GTF3C1-208ENST00000567843 NFKBIBQ15653 356 aa12.34□□□□□ -0.43
GTF3C1-208ENST00000567843 CDKN3Q16667 212 aa12.34□□□□□ -0.43
GTF3C1-208ENST00000567843 UGP2Q16851 508 aa12.34□□□□□ -0.43
GTF3C1-208ENST00000567843 TXNRD3NBQ6F5E7 133 aa12.34□□□□□ -0.43
GTF3C1-208ENST00000567843 PPP1R2P3Q6NXS1 205 aa12.34□□□□□ -0.43
GTF3C1-208ENST00000567843 RD3Q7Z3Z2 195 aa12.34□□□□□ -0.43
GTF3C1-208ENST00000567843 SRLQ86TD4 932 aa12.34□□□□□ -0.43
GTF3C1-208ENST00000567843 NSMCE3Q96MG7 304 aa12.34□□□□□ -0.43
GTF3C1-208ENST00000567843 CINPQ9BW66 212 aaPredicted RBP12.34□□□□□ -0.43
GTF3C1-208ENST00000567843 CPEB1Q9BZB8 566 aaKnown RBP12.34□□□□□ -0.43
GTF3C1-208ENST00000567843 ETNK2Q9NVF9 386 aa12.34□□□□□ -0.43
GTF3C1-208ENST00000567843 NLGN3Q9NZ94 848 aa12.34□□□□□ -0.43
GTF3C1-208ENST00000567843 DKK3Q9UBP4 350 aa12.34□□□□□ -0.43
GTF3C1-208ENST00000567843 PCDHB1Q9Y5F3 818 aa12.34□□□□□ -0.43
GTF3C1-208ENST00000567843 U3KQA8 63 aa12.34□□□□□ -0.43
GTF3C1-208ENST00000567843 H3BM21 787 aa12.33□□□□□ -0.44
GTF3C1-208ENST00000567843 AQP9O43315 295 aa12.33□□□□□ -0.44
GTF3C1-208ENST00000567843 TLX3O43711 291 aaPredicted RBP12.33□□□□□ -0.44
GTF3C1-208ENST00000567843 LZTS3O60299 673 aaPredicted RBP12.33□□□□□ -0.44
GTF3C1-208ENST00000567843 OPA1O60313 960 aa12.33□□□□□ -0.44
GTF3C1-208ENST00000567843 GCATO75600 419 aa12.33□□□□□ -0.44
GTF3C1-208ENST00000567843 CELA2BP08218 269 aaPredicted RBP12.33□□□□□ -0.44
GTF3C1-208ENST00000567843 CDK4P11802 303 aa12.33□□□□□ -0.44
GTF3C1-208ENST00000567843 C6P13671 934 aa12.33□□□□□ -0.44
GTF3C1-208ENST00000567843 EIF4A3P38919 411 aaKnown RBP12.33□□□□□ -0.44
GTF3C1-208ENST00000567843 LIG3P49916 1009 aa12.33□□□□□ -0.44
GTF3C1-208ENST00000567843 UBASH3AP57075 661 aa12.33□□□□□ -0.44
GTF3C1-208ENST00000567843 E2F1Q01094 437 aa12.33□□□□□ -0.44
GTF3C1-208ENST00000567843 WSCD2Q2TBF2 565 aa12.33□□□□□ -0.44
GTF3C1-208ENST00000567843 TMEM52BQ4KMG9 183 aa12.33□□□□□ -0.44
GTF3C1-208ENST00000567843 PRRT3Q5FWE3 981 aa12.33□□□□□ -0.44
GTF3C1-208ENST00000567843 FAXCQ5TGI0 409 aa12.33□□□□□ -0.44
GTF3C1-208ENST00000567843 HGSNATQ68CP4 663 aa12.33□□□□□ -0.44
GTF3C1-208ENST00000567843 GUSBP11Q6P575 273 aa12.33□□□□□ -0.44
GTF3C1-208ENST00000567843 CPNE8Q86YQ8 564 aa12.33□□□□□ -0.44
GTF3C1-208ENST00000567843 PHACTR4Q8IZ21 702 aa12.33□□□□□ -0.44
GTF3C1-208ENST00000567843 TP53I13Q8NBR0 393 aaPredicted RBP12.33□□□□□ -0.44
GTF3C1-208ENST00000567843 DENND6BQ8NEG7 585 aa12.33□□□□□ -0.44
GTF3C1-208ENST00000567843 FAM174AQ8TBP5 190 aa12.33□□□□□ -0.44
GTF3C1-208ENST00000567843 ASB12Q8WXK4 309 aa12.33□□□□□ -0.44
GTF3C1-208ENST00000567843 TSACCQ96A04 125 aaPredicted RBP12.33□□□□□ -0.44
GTF3C1-208ENST00000567843 NXPE2Q96DL1 559 aa12.33□□□□□ -0.44
GTF3C1-208ENST00000567843 IFT43Q96FT9 208 aa12.33□□□□□ -0.44
GTF3C1-208ENST00000567843 THAP2Q9H0W7 228 aa12.33□□□□□ -0.44
GTF3C1-208ENST00000567843 ISCUQ9H1K1 167 aa12.33□□□□□ -0.44
GTF3C1-208ENST00000567843 APOBEC3BQ9UH17 382 aaKnown RBP12.33□□□□□ -0.44
GTF3C1-208ENST00000567843 SCINQ9Y6U3 715 aa12.33□□□□□ -0.44
GTF3C1-208ENST00000567843 RIOK3O14730 519 aaKnown RBP12.32□□□□□ -0.44
GTF3C1-208ENST00000567843 PCCBP05166 539 aa12.32□□□□□ -0.44
GTF3C1-208ENST00000567843 RARAP10276 462 aa12.32□□□□□ -0.44
GTF3C1-208ENST00000567843 ITPKBP27987 946 aa12.32□□□□□ -0.44
GTF3C1-208ENST00000567843 HTR7P34969 479 aa12.32□□□□□ -0.44
GTF3C1-208ENST00000567843 GJC1P36383 396 aa12.32□□□□□ -0.44
GTF3C1-208ENST00000567843 PBX1P40424 430 aa12.32□□□□□ -0.44
GTF3C1-208ENST00000567843 SSR1P43307 286 aaKnown RBP12.32□□□□□ -0.44
GTF3C1-208ENST00000567843 SCNN1BP51168 640 aa12.32□□□□□ -0.44
GTF3C1-208ENST00000567843 TPM4P67936 248 aa12.32□□□□□ -0.44
GTF3C1-208ENST00000567843 SLC10A7Q0GE19 358 aa12.32□□□□□ -0.44
GTF3C1-208ENST00000567843 ELP6Q0PNE2 266 aa12.32□□□□□ -0.44
GTF3C1-208ENST00000567843 DPYSQ14117 519 aa12.32□□□□□ -0.44
GTF3C1-208ENST00000567843 PTK2BQ14289 1009 aa12.32□□□□□ -0.44
GTF3C1-208ENST00000567843 LRRC14Q15048 493 aa12.32□□□□□ -0.44
GTF3C1-208ENST00000567843 AFMIDQ63HM1 303 aa12.32□□□□□ -0.44
GTF3C1-208ENST00000567843 KCTD16Q68DU8 428 aa12.32□□□□□ -0.44
GTF3C1-208ENST00000567843 ERAP2Q6P179 960 aa12.32□□□□□ -0.44
GTF3C1-208ENST00000567843 ENPP7Q6UWV6 458 aa12.32□□□□□ -0.44
GTF3C1-208ENST00000567843 EFL1Q7Z2Z2 1120 aaKnown RBP12.32□□□□□ -0.44
GTF3C1-208ENST00000567843 PDZD3Q86UT5 571 aa12.32□□□□□ -0.44
GTF3C1-208ENST00000567843 ZSCAN30Q86W11 494 aa12.32□□□□□ -0.44
GTF3C1-208ENST00000567843 HID1Q8IV36 788 aa12.32□□□□□ -0.44
GTF3C1-208ENST00000567843 PLA2G15Q8NCC3 412 aa12.32□□□□□ -0.44
GTF3C1-208ENST00000567843 IFI44Q8TCB0 444 aa12.32□□□□□ -0.44
GTF3C1-208ENST00000567843 MAPK15Q8TD08 544 aa12.32□□□□□ -0.44
GTF3C1-208ENST00000567843 FNIP1Q8TF40 1166 aa12.32□□□□□ -0.44
GTF3C1-208ENST00000567843 IL12RB2Q99665 862 aa12.32□□□□□ -0.44
GTF3C1-208ENST00000567843 LRRC61Q9BV99 259 aa12.32□□□□□ -0.44
GTF3C1-208ENST00000567843 EDEM3Q9BZQ6 932 aa12.32□□□□□ -0.44
GTF3C1-208ENST00000567843 CLPBQ9H078 707 aa12.32□□□□□ -0.44
GTF3C1-208ENST00000567843 ABCG4Q9H172 646 aa12.32□□□□□ -0.44
GTF3C1-208ENST00000567843 MRPL47Q9HD33 250 aaKnown RBP12.32□□□□□ -0.44
GTF3C1-208ENST00000567843 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.32□□□□□ -0.44
GTF3C1-208ENST00000567843 IFNKQ9P0W0 207 aa12.32□□□□□ -0.44
GTF3C1-208ENST00000567843 SPASTQ9UBP0 616 aa12.32□□□□□ -0.44
GTF3C1-208ENST00000567843 DKK4Q9UBT3 224 aa12.32□□□□□ -0.44
GTF3C1-208ENST00000567843 ATP8A1Q9Y2Q0 1164 aa12.32□□□□□ -0.44
GTF3C1-208ENST00000567843 OR1A2Q9Y585 309 aa12.32□□□□□ -0.44
GTF3C1-208ENST00000567843 FASNP49327 2511 aaKnown RBP12.31□□□□□ -0.44
GTF3C1-208ENST00000567843 A0A087X0T9 212 aa12.31□□□□□ -0.44
GTF3C1-208ENST00000567843 TSPAN11A1L157 253 aa12.31□□□□□ -0.44
GTF3C1-208ENST00000567843 H3BRJ5 948 aa12.31□□□□□ -0.44
GTF3C1-208ENST00000567843 BRINP1O60477 761 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms