RNA–Protein interactions for RNA: ENST00000567269.5

CDH16-206, Transcript of cadherin 16, humanhuman

TSL 2

Gene CDH16, Length 3,539 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16-206ENST00000567269 DNAJC14Q6Y2X3 702 aaPredicted RBP12.18□□□□□ -0.46
CDH16-206ENST00000567269 PGBD5Q8N414 524 aa12.18□□□□□ -0.46
CDH16-206ENST00000567269 DNAJC1Q96KC8 554 aaKnown RBP12.18□□□□□ -0.46
CDH16-206ENST00000567269 SPATA17Q96L03 361 aa12.18□□□□□ -0.46
CDH16-206ENST00000567269 TMEM175Q9BSA9 504 aa12.18□□□□□ -0.46
CDH16-206ENST00000567269 NUF2Q9BZD4 464 aa12.18□□□□□ -0.46
CDH16-206ENST00000567269 WDR55Q9H6Y2 383 aaPredicted RBP12.18□□□□□ -0.46
CDH16-206ENST00000567269 COG4Q9H9E3 785 aa12.18□□□□□ -0.46
CDH16-206ENST00000567269 UBA2Q9UBT2 640 aaPredicted RBP12.18□□□□□ -0.46
CDH16-206ENST00000567269 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.18□□□□□ -0.46
CDH16-206ENST00000567269 THSD7BQ9C0I4 1608 aa12.18□□□□□ -0.46
CDH16-206ENST00000567269 ZNF840PA6NDX5 716 aa12.18□□□□□ -0.46
CDH16-206ENST00000567269 MUSKO15146 869 aa12.18□□□□□ -0.46
CDH16-206ENST00000567269 HNRNPCL1O60812 293 aaKnown RBP12.18□□□□□ -0.46
CDH16-206ENST00000567269 ZMPSTE24O75844 475 aa12.18□□□□□ -0.46
CDH16-206ENST00000567269 ARRB2P32121 409 aa12.18□□□□□ -0.46
CDH16-206ENST00000567269 EPHB1P54762 984 aa12.18□□□□□ -0.46
CDH16-206ENST00000567269 YBEYP58557 167 aaPredicted RBP12.18□□□□□ -0.46
CDH16-206ENST00000567269 SPDYAQ5MJ70 313 aa12.18□□□□□ -0.46
CDH16-206ENST00000567269 STXBP5Q5T5C0 1151 aa12.18□□□□□ -0.46
CDH16-206ENST00000567269 KIAA0930Q6ICG6 404 aaPredicted RBP12.18□□□□□ -0.46
CDH16-206ENST00000567269 LRRC8EQ6NSJ5 796 aa12.18□□□□□ -0.46
CDH16-206ENST00000567269 TMC7Q7Z402 723 aa12.18□□□□□ -0.46
CDH16-206ENST00000567269 ARHGAP24Q8N264 748 aa12.18□□□□□ -0.46
CDH16-206ENST00000567269 OR13C4Q8NGS5 318 aa12.18□□□□□ -0.46
CDH16-206ENST00000567269 ZNF461Q8TAF7 563 aa12.18□□□□□ -0.46
CDH16-206ENST00000567269 PCDHGC4Q9Y5F7 938 aa12.18□□□□□ -0.46
CDH16-206ENST00000567269 CASP8AP2Q9UKL3 1982 aa12.18□□□□□ -0.46
CDH16-206ENST00000567269 GOLGA8CPA6NN73 597 aa12.17□□□□□ -0.46
CDH16-206ENST00000567269 GSC2O15499 205 aa12.17□□□□□ -0.46
CDH16-206ENST00000567269 CACNG3O60359 315 aa12.17□□□□□ -0.46
CDH16-206ENST00000567269 ANP32DO95626 131 aa12.17□□□□□ -0.46
CDH16-206ENST00000567269 ARCN1P48444 511 aaKnown RBP12.17□□□□□ -0.46
CDH16-206ENST00000567269 SMAD3P84022 425 aaKnown RBP12.17□□□□□ -0.46
CDH16-206ENST00000567269 NRG1Q02297 640 aaPredicted RBP12.17□□□□□ -0.46
CDH16-206ENST00000567269 ASPHQ12797 758 aa12.17□□□□□ -0.46
CDH16-206ENST00000567269 FAM83EQ2M2I3 478 aa12.17□□□□□ -0.46
CDH16-206ENST00000567269 HSF5Q4G112 596 aaPredicted RBP12.17□□□□□ -0.46
CDH16-206ENST00000567269 ARL13AQ5H913 290 aaPredicted RBP12.17□□□□□ -0.46
CDH16-206ENST00000567269 C6orf163Q5TEZ5 329 aa12.17□□□□□ -0.46
CDH16-206ENST00000567269 FBXO27Q8NI29 283 aa12.17□□□□□ -0.46
CDH16-206ENST00000567269 CCDC124Q96CT7 223 aaKnown RBP12.17□□□□□ -0.46
CDH16-206ENST00000567269 CLPTM1LQ96KA5 538 aa12.17□□□□□ -0.46
CDH16-206ENST00000567269 ZNF558Q96NG5 402 aa12.17□□□□□ -0.46
CDH16-206ENST00000567269 CLSTN3Q9BQT9 956 aa12.17□□□□□ -0.46
CDH16-206ENST00000567269 DENND2DQ9H6A0 471 aaPredicted RBP12.17□□□□□ -0.46
CDH16-206ENST00000567269 PLK2Q9NYY3 685 aa12.17□□□□□ -0.46
CDH16-206ENST00000567269 WASH4PA8MWX3 477 aa12.17□□□□□ -0.46
CDH16-206ENST00000567269 G3V2L1 256 aa12.17□□□□□ -0.46
CDH16-206ENST00000567269 PEX11BO96011 259 aa12.17□□□□□ -0.46
CDH16-206ENST00000567269 APOA4P06727 396 aa12.17□□□□□ -0.46
CDH16-206ENST00000567269 PYGLP06737 847 aa12.17□□□□□ -0.46
CDH16-206ENST00000567269 SERPINA6P08185 405 aa12.17□□□□□ -0.46
CDH16-206ENST00000567269 ACRP10323 421 aa12.17□□□□□ -0.46
CDH16-206ENST00000567269 HNRNPLP14866 589 aaKnown RBP eCLIP12.17□□□□□ -0.46
CDH16-206ENST00000567269 CCND1P24385 295 aa12.17□□□□□ -0.46
CDH16-206ENST00000567269 EPHA3P29320 983 aa12.17□□□□□ -0.46
CDH16-206ENST00000567269 RING1Q06587 406 aa12.17□□□□□ -0.46
CDH16-206ENST00000567269 PEX6Q13608 980 aa12.17□□□□□ -0.46
CDH16-206ENST00000567269 RNF219Q5W0B1 726 aaPredicted RBP12.17□□□□□ -0.46
CDH16-206ENST00000567269 AFMIDQ63HM1 303 aa12.17□□□□□ -0.46
CDH16-206ENST00000567269 RBM15BQ8NDT2 890 aaKnown RBP12.17□□□□□ -0.46
CDH16-206ENST00000567269 LPCAT1Q8NF37 534 aa12.17□□□□□ -0.46
CDH16-206ENST00000567269 OR52K2Q8NGK3 314 aa12.17□□□□□ -0.46
CDH16-206ENST00000567269 PTCD2Q8WV60 388 aaKnown RBP12.17□□□□□ -0.46
CDH16-206ENST00000567269 HEXDCQ8WVB3 486 aa12.17□□□□□ -0.46
CDH16-206ENST00000567269 YME1L1Q96TA2 773 aa12.17□□□□□ -0.46
CDH16-206ENST00000567269 SORT1Q99523 831 aa12.17□□□□□ -0.46
CDH16-206ENST00000567269 CCDC68Q9H2F9 335 aa12.17□□□□□ -0.46
CDH16-206ENST00000567269 NOP53Q9NZM5 478 aaKnown RBP12.17□□□□□ -0.46
CDH16-206ENST00000567269 MTRRQ9UBK8 725 aa12.17□□□□□ -0.46
CDH16-206ENST00000567269 TAGLN3Q9UI15 199 aa12.17□□□□□ -0.46
CDH16-206ENST00000567269 TSR3Q9UJK0 312 aaKnown RBP12.17□□□□□ -0.46
CDH16-206ENST00000567269 CIB2O75838 187 aa12.17□□□□□ -0.46
CDH16-206ENST00000567269 GLP2RO95838 553 aa12.17□□□□□ -0.46
CDH16-206ENST00000567269 C1RP00736 705 aa12.17□□□□□ -0.46
CDH16-206ENST00000567269 SERPINB5P36952 375 aa12.17□□□□□ -0.46
CDH16-206ENST00000567269 RANBP1P43487 201 aa12.17□□□□□ -0.46
CDH16-206ENST00000567269 MAPKAPK2P49137 400 aa12.17□□□□□ -0.46
CDH16-206ENST00000567269 IDH3AP50213 366 aa12.17□□□□□ -0.46
CDH16-206ENST00000567269 SLC39A5Q6ZMH5 540 aa12.17□□□□□ -0.46
CDH16-206ENST00000567269 RPS27LQ71UM5 84 aaKnown RBP12.17□□□□□ -0.46
CDH16-206ENST00000567269 ZNF683Q8IZ20 524 aa12.17□□□□□ -0.46
CDH16-206ENST00000567269 HIPK4Q8NE63 616 aa12.17□□□□□ -0.46
CDH16-206ENST00000567269 DIS3LQ8TF46 1054 aaKnown RBP12.17□□□□□ -0.46
CDH16-206ENST00000567269 SCG3Q8WXD2 468 aaKnown RBP12.17□□□□□ -0.46
CDH16-206ENST00000567269 CDK5RAP1Q96SZ6 601 aaKnown RBP12.17□□□□□ -0.46
CDH16-206ENST00000567269 RNF38Q9H0F5 515 aa12.17□□□□□ -0.46
CDH16-206ENST00000567269 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.17□□□□□ -0.46
CDH16-206ENST00000567269 SEPT3Q9UH03 358 aa12.17□□□□□ -0.46
CDH16-206ENST00000567269 VPS28Q9UK41 221 aa12.17□□□□□ -0.46
CDH16-206ENST00000567269 ANKRD6Q9Y2G4 727 aa12.17□□□□□ -0.46
CDH16-206ENST00000567269 YIPF1Q9Y548 306 aa12.17□□□□□ -0.46
CDH16-206ENST00000567269 MYO16Q9Y6X6 1858 aa12.17□□□□□ -0.46
CDH16-206ENST00000567269 FAM92AA1XBS5 289 aa12.16□□□□□ -0.46
CDH16-206ENST00000567269 PRAMEF11O60813 436 aa12.16□□□□□ -0.46
CDH16-206ENST00000567269 SIN3BO75182 1162 aa12.16□□□□□ -0.46
CDH16-206ENST00000567269 KLKB1P03952 638 aa12.16□□□□□ -0.46
CDH16-206ENST00000567269 CKMP06732 381 aa12.16□□□□□ -0.46
CDH16-206ENST00000567269 TSPAN8P19075 237 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms