RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 SLC25A12O75746 678 aa3.42□□□□□ -1.86
HERPUD1-211ENST00000566550 RAD17O75943 681 aa3.42□□□□□ -1.86
HERPUD1-211ENST00000566550 DDAH2O95865 285 aa3.42□□□□□ -1.86
HERPUD1-211ENST00000566550 TRUB2O95900 331 aaKnown RBP3.42□□□□□ -1.86
HERPUD1-211ENST00000566550 HLA-DOAP06340 250 aa3.42□□□□□ -1.86
HERPUD1-211ENST00000566550 FAM90A13PP0C7W8 464 aa3.42□□□□□ -1.86
HERPUD1-211ENST00000566550 FAM90A24PP0C7X0 464 aa3.42□□□□□ -1.86
HERPUD1-211ENST00000566550 GHRP10912 638 aa3.42□□□□□ -1.86
HERPUD1-211ENST00000566550 PKMP14618 531 aaKnown RBP3.42□□□□□ -1.86
HERPUD1-211ENST00000566550 CREB1P16220 341 aa3.42□□□□□ -1.86
HERPUD1-211ENST00000566550 ZNF28P17035 718 aa3.42□□□□□ -1.86
HERPUD1-211ENST00000566550 TYMPP19971 482 aa3.42□□□□□ -1.86
HERPUD1-211ENST00000566550 MCM5P33992 734 aa3.42□□□□□ -1.86
HERPUD1-211ENST00000566550 PEX19P40855 299 aa3.42□□□□□ -1.86
HERPUD1-211ENST00000566550 TNNT2P45379 298 aaPredicted RBP3.42□□□□□ -1.86
HERPUD1-211ENST00000566550 CRKLP46109 303 aaKnown RBP3.42□□□□□ -1.86
HERPUD1-211ENST00000566550 KCNJ1P48048 391 aa3.42□□□□□ -1.86
HERPUD1-211ENST00000566550 CAMLGP49069 296 aa3.42□□□□□ -1.86
HERPUD1-211ENST00000566550 ANXA11P50995 505 aaKnown RBP3.42□□□□□ -1.86
HERPUD1-211ENST00000566550 GPC3P51654 580 aa3.42□□□□□ -1.86
HERPUD1-211ENST00000566550 PNLIPRP2P54317 469 aa3.42□□□□□ -1.86
HERPUD1-211ENST00000566550 EPHB4P54760 987 aa3.42□□□□□ -1.86
HERPUD1-211ENST00000566550 TUBB4BP68371 445 aa3.42□□□□□ -1.86
HERPUD1-211ENST00000566550 RAE1P78406 368 aaKnown RBP3.42□□□□□ -1.86
HERPUD1-211ENST00000566550 FAM189BP81408 668 aa3.42□□□□□ -1.86
HERPUD1-211ENST00000566550 TXNL4AP83876 142 aaKnown RBP3.42□□□□□ -1.86
HERPUD1-211ENST00000566550 ARF5P84085 180 aa3.42□□□□□ -1.86
HERPUD1-211ENST00000566550 SHC2P98077 582 aa3.42□□□□□ -1.86
HERPUD1-211ENST00000566550 FPGSQ05932 587 aa3.42□□□□□ -1.86
HERPUD1-211ENST00000566550 DEUP1Q05D60 604 aa3.42□□□□□ -1.86
HERPUD1-211ENST00000566550 ACSM2AQ08AH3 577 aa3.42□□□□□ -1.86
HERPUD1-211ENST00000566550 GRSF1Q12849 480 aaKnown RBP eCLIP3.42□□□□□ -1.86
HERPUD1-211ENST00000566550 LMAN2Q12907 356 aa3.42□□□□□ -1.86
HERPUD1-211ENST00000566550 FGFBP1Q14512 234 aa3.42□□□□□ -1.86
HERPUD1-211ENST00000566550 MEP1BQ16820 701 aa3.42□□□□□ -1.86
HERPUD1-211ENST00000566550 RNF151Q2KHN1 245 aa3.42□□□□□ -1.86
HERPUD1-211ENST00000566550 PROSER3Q2NL68 480 aa3.42□□□□□ -1.86
HERPUD1-211ENST00000566550 KBTBD12Q3ZCT8 623 aa3.42□□□□□ -1.86
HERPUD1-211ENST00000566550 TOR1AIP1Q5JTV8 583 aa3.42□□□□□ -1.86
HERPUD1-211ENST00000566550 SERTAD4-AS1Q5TG53 156 aa3.42□□□□□ -1.86
HERPUD1-211ENST00000566550 ACSM2BQ68CK6 577 aa3.42□□□□□ -1.86
HERPUD1-211ENST00000566550 JADE1Q6IE81 842 aa3.42□□□□□ -1.86
HERPUD1-211ENST00000566550 ACSM6Q6P461 480 aa3.42□□□□□ -1.86
HERPUD1-211ENST00000566550 DRICH1Q6PGQ1 229 aaPredicted RBP3.42□□□□□ -1.86
HERPUD1-211ENST00000566550 LINC00696Q6ZRV3 163 aa3.42□□□□□ -1.86
HERPUD1-211ENST00000566550 MSANTD1Q6ZTZ1 278 aa3.42□□□□□ -1.86
HERPUD1-211ENST00000566550 DOK3Q7L591 496 aa3.42□□□□□ -1.86
HERPUD1-211ENST00000566550 PPP1R42Q7Z4L9 355 aa3.42□□□□□ -1.86
HERPUD1-211ENST00000566550 SPATA21Q7Z572 469 aa3.42□□□□□ -1.86
HERPUD1-211ENST00000566550 SPATA19Q7Z5L4 167 aa3.42□□□□□ -1.86
HERPUD1-211ENST00000566550 CLNKQ7Z7G1 428 aa3.42□□□□□ -1.86
HERPUD1-211ENST00000566550 CENPVQ7Z7K6 275 aaPredicted RBP3.42□□□□□ -1.86
HERPUD1-211ENST00000566550 RALYLQ86SE5 291 aaKnown RBP3.42□□□□□ -1.86
HERPUD1-211ENST00000566550 DHX40Q8IX18 779 aaKnown RBP3.42□□□□□ -1.86
HERPUD1-211ENST00000566550 FAM217AQ8IXS0 508 aa3.42□□□□□ -1.86
HERPUD1-211ENST00000566550 ELOA2Q8IYF1 753 aaPredicted RBP3.42□□□□□ -1.86
HERPUD1-211ENST00000566550 ADGRG5Q8IZF4 528 aa3.42□□□□□ -1.86
HERPUD1-211ENST00000566550 ENDOVQ8N8Q3 282 aaKnown RBP3.42□□□□□ -1.86
HERPUD1-211ENST00000566550 NEK9Q8TD19 979 aa3.42□□□□□ -1.86
HERPUD1-211ENST00000566550 BCAS4Q8TDM0 211 aa3.42□□□□□ -1.86
HERPUD1-211ENST00000566550 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.42□□□□□ -1.86
HERPUD1-211ENST00000566550 LPGAT1Q92604 370 aa3.42□□□□□ -1.86
HERPUD1-211ENST00000566550 RABGGTAQ92696 567 aa3.42□□□□□ -1.86
HERPUD1-211ENST00000566550 DVL3Q92997 716 aaPredicted RBP3.42□□□□□ -1.86
HERPUD1-211ENST00000566550 FAM136AQ96C01 138 aa3.42□□□□□ -1.86
HERPUD1-211ENST00000566550 C8orf49Q96NF6 230 aa3.42□□□□□ -1.86
HERPUD1-211ENST00000566550 FYTTD1Q96QD9 318 aaKnown RBP3.42□□□□□ -1.86
HERPUD1-211ENST00000566550 CDRT15Q96T59 188 aa3.42□□□□□ -1.86
HERPUD1-211ENST00000566550 H2AFJQ9BTM1 129 aa3.42□□□□□ -1.86
HERPUD1-211ENST00000566550 SLC25A23Q9BV35 468 aa3.42□□□□□ -1.86
HERPUD1-211ENST00000566550 ACTRT3Q9BYD9 372 aa3.42□□□□□ -1.86
HERPUD1-211ENST00000566550 TMEM168Q9H0V1 697 aa3.42□□□□□ -1.86
HERPUD1-211ENST00000566550 CDCP1Q9H5V8 836 aa3.42□□□□□ -1.86
HERPUD1-211ENST00000566550 SIRT3Q9NTG7 399 aaPredicted RBP3.42□□□□□ -1.86
HERPUD1-211ENST00000566550 ARL15Q9NXU5 204 aa3.42□□□□□ -1.86
HERPUD1-211ENST00000566550 AATFQ9NY61 560 aaKnown RBP eCLIP3.42□□□□□ -1.86
HERPUD1-211ENST00000566550 HAO2Q9NYQ3 351 aa3.42□□□□□ -1.86
HERPUD1-211ENST00000566550 NINJ2Q9NZG7 142 aa3.42□□□□□ -1.86
HERPUD1-211ENST00000566550 NCKIPSDQ9NZQ3 722 aa3.42□□□□□ -1.86
HERPUD1-211ENST00000566550 FAM30AQ9NZY2 134 aa3.42□□□□□ -1.86
HERPUD1-211ENST00000566550 CNIH4Q9P003 139 aa3.42□□□□□ -1.86
HERPUD1-211ENST00000566550 PLAGL1Q9UM63 463 aa3.42□□□□□ -1.86
HERPUD1-211ENST00000566550 EXOC7Q9UPT5 735 aa3.42□□□□□ -1.86
HERPUD1-211ENST00000566550 LIPT1Q9Y234 373 aa3.42□□□□□ -1.86
HERPUD1-211ENST00000566550 PIN4Q9Y237 131 aaKnown RBP3.42□□□□□ -1.86
HERPUD1-211ENST00000566550 BTBD3Q9Y2F9 522 aa3.42□□□□□ -1.86
HERPUD1-211ENST00000566550 AAR2Q9Y312 384 aaKnown RBP3.42□□□□□ -1.86
HERPUD1-211ENST00000566550 ANGPTL3Q9Y5C1 460 aa3.42□□□□□ -1.86
HERPUD1-211ENST00000566550 ARAP1Q96P48 1450 aa3.41□□□□□ -1.86
HERPUD1-211ENST00000566550 LOC102723996A0A087X1L8 192 aa3.41□□□□□ -1.86
HERPUD1-211ENST00000566550 TCRBV21S2A2A0A5A6 115 aa3.41□□□□□ -1.86
HERPUD1-211ENST00000566550 SH3D21A4FU49 640 aa3.41□□□□□ -1.86
HERPUD1-211ENST00000566550 C17orf100A8MU93 164 aa3.41□□□□□ -1.86
HERPUD1-211ENST00000566550 CES2O00748 559 aa3.41□□□□□ -1.86
HERPUD1-211ENST00000566550 ZBTB43O43298 467 aa3.41□□□□□ -1.86
HERPUD1-211ENST00000566550 SPRY2O43597 315 aa3.41□□□□□ -1.86
HERPUD1-211ENST00000566550 PLRG1O43660 514 aaKnown RBP3.41□□□□□ -1.86
HERPUD1-211ENST00000566550 VEGFDO43915 354 aa3.41□□□□□ -1.86
HERPUD1-211ENST00000566550 ZWINTO95229 277 aa3.41□□□□□ -1.86
HERPUD1-211ENST00000566550 GPANK1O95872 356 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms