RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 ATP8A2Q9NTI2 1148 aa2.3□□□□□ -2.04
SMG1-212ENST00000566328 SLC9A2Q9UBY0 812 aa2.3□□□□□ -2.04
SMG1-212ENST00000566328 DAPP1Q9UN19 280 aa2.3□□□□□ -2.04
SMG1-212ENST00000566328 NOTCH2Q04721 2471 aa2.29□□□□□ -2.04
SMG1-212ENST00000566328 DVL1O14640 695 aa2.29□□□□□ -2.04
SMG1-212ENST00000566328 PMM2O15305 246 aa2.29□□□□□ -2.04
SMG1-212ENST00000566328 ZIC3O60481 467 aa2.29□□□□□ -2.04
SMG1-212ENST00000566328 MTA2O94776 668 aa2.29□□□□□ -2.04
SMG1-212ENST00000566328 METTL18O95568 372 aa2.29□□□□□ -2.04
SMG1-212ENST00000566328 SERPINC1P01008 464 aa2.29□□□□□ -2.04
SMG1-212ENST00000566328 WEE2P0C1S8 567 aa2.29□□□□□ -2.04
SMG1-212ENST00000566328 CDH1P12830 882 aa2.29□□□□□ -2.04
SMG1-212ENST00000566328 GPTP24298 496 aa2.29□□□□□ -2.04
SMG1-212ENST00000566328 SERPINA4P29622 427 aa2.29□□□□□ -2.04
SMG1-212ENST00000566328 TM4SF4P48230 202 aa2.29□□□□□ -2.04
SMG1-212ENST00000566328 TERF1P54274 439 aa2.29□□□□□ -2.04
SMG1-212ENST00000566328 DVL1P1P54792 670 aaPredicted RBP2.29□□□□□ -2.04
SMG1-212ENST00000566328 LMO4P61968 165 aa2.29□□□□□ -2.04
SMG1-212ENST00000566328 BYSLQ13895 437 aaKnown RBP2.29□□□□□ -2.04
SMG1-212ENST00000566328 RPE65Q16518 533 aa2.29□□□□□ -2.04
SMG1-212ENST00000566328 LPAL2Q16609 132 aa2.29□□□□□ -2.04
SMG1-212ENST00000566328 KRTAP13-3Q3SY46 172 aa2.29□□□□□ -2.04
SMG1-212ENST00000566328 PPP6R3Q5H9R7 873 aaPredicted RBP2.29□□□□□ -2.04
SMG1-212ENST00000566328 LCE3AQ5TA76 89 aa2.29□□□□□ -2.04
SMG1-212ENST00000566328 TTC22Q5TAA0 569 aa2.29□□□□□ -2.04
SMG1-212ENST00000566328 BSPRYQ5W0U4 402 aa2.29□□□□□ -2.04
SMG1-212ENST00000566328 SLC35E4Q6ICL7 350 aa2.29□□□□□ -2.04
SMG1-212ENST00000566328 CEACAM20Q6UY09 585 aa2.29□□□□□ -2.04
SMG1-212ENST00000566328 SYTL1Q8IYJ3 562 aa2.29□□□□□ -2.04
SMG1-212ENST00000566328 OR10V1Q8NGI7 309 aa2.29□□□□□ -2.04
SMG1-212ENST00000566328 ARRDC2Q8TBH0 407 aa2.29□□□□□ -2.04
SMG1-212ENST00000566328 FAM71BQ8TC56 605 aa2.29□□□□□ -2.04
SMG1-212ENST00000566328 HCAR2Q8TDS4 363 aa2.29□□□□□ -2.04
SMG1-212ENST00000566328 EID2BQ96D98 161 aa2.29□□□□□ -2.04
SMG1-212ENST00000566328 CCDC138Q96M89 665 aa2.29□□□□□ -2.04
SMG1-212ENST00000566328 YME1L1Q96TA2 773 aa2.29□□□□□ -2.04
SMG1-212ENST00000566328 MYD88Q99836 296 aa2.29□□□□□ -2.04
SMG1-212ENST00000566328 LRRC1Q9BTT6 524 aa2.29□□□□□ -2.04
SMG1-212ENST00000566328 NOX4Q9NPH5 578 aa2.29□□□□□ -2.04
SMG1-212ENST00000566328 CHST12Q9NRB3 414 aa2.29□□□□□ -2.04
SMG1-212ENST00000566328 THAP1Q9NVV9 213 aa2.29□□□□□ -2.04
SMG1-212ENST00000566328 IFT80Q9P2H3 777 aaPredicted RBP2.29□□□□□ -2.04
SMG1-212ENST00000566328 NLKQ9UBE8 527 aa2.29□□□□□ -2.04
SMG1-212ENST00000566328 RCE1Q9Y256 329 aa2.29□□□□□ -2.04
SMG1-212ENST00000566328 KCNK7Q9Y2U2 307 aa2.29□□□□□ -2.04
SMG1-212ENST00000566328 PCDHGB2Q9Y5G2 931 aa2.29□□□□□ -2.04
SMG1-212ENST00000566328 GOLGA6L3A6NEY3 463 aa2.28□□□□□ -2.04
SMG1-212ENST00000566328 AKR1B15C9JRZ8 316 aaPredicted RBP2.28□□□□□ -2.04
SMG1-212ENST00000566328 SLC25A17O43808 307 aa2.28□□□□□ -2.04
SMG1-212ENST00000566328 ACTL6BO94805 426 aa2.28□□□□□ -2.04
SMG1-212ENST00000566328 NDUFB4O95168 129 aa2.28□□□□□ -2.04
SMG1-212ENST00000566328 INHBAP08476 426 aa2.28□□□□□ -2.04
SMG1-212ENST00000566328 ARSAP15289 507 aa2.28□□□□□ -2.04
SMG1-212ENST00000566328 PAX1P15863 534 aa2.28□□□□□ -2.04
SMG1-212ENST00000566328 CD58P19256 250 aa2.28□□□□□ -2.04
SMG1-212ENST00000566328 USP8P40818 1118 aa2.28□□□□□ -2.04
SMG1-212ENST00000566328 MTNR1AP48039 350 aa2.28□□□□□ -2.04
SMG1-212ENST00000566328 CSRP3P50461 194 aa2.28□□□□□ -2.04
SMG1-212ENST00000566328 LUMP51884 338 aaPredicted RBP2.28□□□□□ -2.04
SMG1-212ENST00000566328 MVDP53602 400 aa2.28□□□□□ -2.04
SMG1-212ENST00000566328 AP2B1P63010 937 aa2.28□□□□□ -2.04
SMG1-212ENST00000566328 IRX6P78412 446 aaPredicted RBP2.28□□□□□ -2.04
SMG1-212ENST00000566328 SLC18A2Q05940 514 aa2.28□□□□□ -2.04
SMG1-212ENST00000566328 GOLGA8FQ08AF8 430 aa2.28□□□□□ -2.04
SMG1-212ENST00000566328 PTK2BQ14289 1009 aa2.28□□□□□ -2.04
SMG1-212ENST00000566328 SPARCL1Q14515 664 aa2.28□□□□□ -2.04
SMG1-212ENST00000566328 IL13RA2Q14627 380 aa2.28□□□□□ -2.04
SMG1-212ENST00000566328 ME3Q16798 604 aa2.28□□□□□ -2.04
SMG1-212ENST00000566328 ZNF484Q5JVG2 852 aa2.28□□□□□ -2.04
SMG1-212ENST00000566328 PDSS1Q5T2R2 415 aa2.28□□□□□ -2.04
SMG1-212ENST00000566328 CCDC181Q5TID7 509 aa2.28□□□□□ -2.04
SMG1-212ENST00000566328 ARHGAP17Q68EM7 881 aa2.28□□□□□ -2.04
SMG1-212ENST00000566328 LCTLQ6UWM7 567 aa2.28□□□□□ -2.04
SMG1-212ENST00000566328 CCDC117Q8IWD4 279 aaPredicted RBP2.28□□□□□ -2.04
SMG1-212ENST00000566328 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP2.28□□□□□ -2.04
SMG1-212ENST00000566328 FAM186BQ8IYM0 893 aa2.28□□□□□ -2.04
SMG1-212ENST00000566328 SRBD1Q8N5C6 995 aaKnown RBP2.28□□□□□ -2.04
SMG1-212ENST00000566328 SLC24A4Q8NFF2 622 aa2.28□□□□□ -2.04
SMG1-212ENST00000566328 PJA1Q8NG27 643 aa2.28□□□□□ -2.04
SMG1-212ENST00000566328 C3orf49Q96BT1 292 aa2.28□□□□□ -2.04
SMG1-212ENST00000566328 CDCA5Q96FF9 252 aa2.28□□□□□ -2.04
SMG1-212ENST00000566328 ASCL2Q99929 193 aa2.28□□□□□ -2.04
SMG1-212ENST00000566328 KATNAL1Q9BW62 490 aa2.28□□□□□ -2.04
SMG1-212ENST00000566328 PLEKHA5Q9HAU0 1116 aa2.28□□□□□ -2.04
SMG1-212ENST00000566328 ENTPD7Q9NQZ7 604 aa2.28□□□□□ -2.04
SMG1-212ENST00000566328 KLHL1Q9NR64 748 aa2.28□□□□□ -2.04
SMG1-212ENST00000566328 CYSLTR2Q9NS75 346 aa2.28□□□□□ -2.04
SMG1-212ENST00000566328 KCNS2Q9ULS6 477 aa2.28□□□□□ -2.04
SMG1-212ENST00000566328 CDC14AQ9UNH5 594 aa2.28□□□□□ -2.04
SMG1-212ENST00000566328 RNF215Q9Y6U7 377 aa2.28□□□□□ -2.04
SMG1-212ENST00000566328 AQP12BA6NM10 295 aa2.27□□□□□ -2.05
SMG1-212ENST00000566328 BLOC1S5-TXNDC5H3BN57 136 aa2.27□□□□□ -2.05
SMG1-212ENST00000566328 CRLF1O75462 422 aa2.27□□□□□ -2.05
SMG1-212ENST00000566328 MYL3P08590 195 aa2.27□□□□□ -2.05
SMG1-212ENST00000566328 ACP5P13686 325 aa2.27□□□□□ -2.05
SMG1-212ENST00000566328 TTKP33981 857 aa2.27□□□□□ -2.05
SMG1-212ENST00000566328 PNPLA4P41247 253 aa2.27□□□□□ -2.05
SMG1-212ENST00000566328 HOXA1P49639 335 aaPredicted RBP2.27□□□□□ -2.05
SMG1-212ENST00000566328 ARSFP54793 590 aa2.27□□□□□ -2.05
SMG1-212ENST00000566328 BRWD1-AS2P59051 145 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms