RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 LIG3P49916 1009 aa6.47□□□□□ -1.37
TCF4-228ENST00000565393 BLKP51451 505 aa6.47□□□□□ -1.37
TCF4-228ENST00000565393 RENBPP51606 427 aa6.47□□□□□ -1.37
TCF4-228ENST00000565393 IL10RBQ08334 325 aa6.47□□□□□ -1.37
TCF4-228ENST00000565393 NSUN2Q08J23 767 aaKnown RBP eCLIP6.47□□□□□ -1.37
TCF4-228ENST00000565393 CCDC173Q0VFZ6 552 aa6.47□□□□□ -1.37
TCF4-228ENST00000565393 NR0B2Q15466 257 aa6.47□□□□□ -1.37
TCF4-228ENST00000565393 TCEA2Q15560 299 aa6.47□□□□□ -1.37
TCF4-228ENST00000565393 WSCD2Q2TBF2 565 aa6.47□□□□□ -1.37
TCF4-228ENST00000565393 BOLA3Q53S33 107 aa6.47□□□□□ -1.37
TCF4-228ENST00000565393 TDRD12Q587J7 1177 aaKnown RBP6.47□□□□□ -1.37
TCF4-228ENST00000565393 TPRG1LQ5T0D9 272 aa6.47□□□□□ -1.37
TCF4-228ENST00000565393 GUSBP11Q6P575 273 aa6.47□□□□□ -1.37
TCF4-228ENST00000565393 FOXR1Q6PIV2 292 aa6.47□□□□□ -1.37
TCF4-228ENST00000565393 BRAT1Q6PJG6 821 aa6.47□□□□□ -1.37
TCF4-228ENST00000565393 CRTC1Q6UUV9 634 aa6.47□□□□□ -1.37
TCF4-228ENST00000565393 EFL1Q7Z2Z2 1120 aaKnown RBP6.47□□□□□ -1.37
TCF4-228ENST00000565393 RBFAQ8N0V3 343 aa6.47□□□□□ -1.37
TCF4-228ENST00000565393 LSMEM2Q8N112 164 aa6.47□□□□□ -1.37
TCF4-228ENST00000565393 ARFGAP1Q8N6T3 406 aa6.47□□□□□ -1.37
TCF4-228ENST00000565393 DCBLD1Q8N8Z6 715 aa6.47□□□□□ -1.37
TCF4-228ENST00000565393 FAM181AQ8N9Y4 354 aa6.47□□□□□ -1.37
TCF4-228ENST00000565393 TSEN2Q8NCE0 465 aaKnown RBP6.47□□□□□ -1.37
TCF4-228ENST00000565393 DENND6BQ8NEG7 585 aa6.47□□□□□ -1.37
TCF4-228ENST00000565393 ZNF548Q8NEK5 533 aaPredicted RBP6.47□□□□□ -1.37
TCF4-228ENST00000565393 TPCN2Q8NHX9 752 aa6.47□□□□□ -1.37
TCF4-228ENST00000565393 PDCD6IPQ8WUM4 868 aaKnown RBP6.47□□□□□ -1.37
TCF4-228ENST00000565393 NSMCE1Q8WV22 266 aa6.47□□□□□ -1.37
TCF4-228ENST00000565393 RFFLQ8WZ73 363 aa6.47□□□□□ -1.37
TCF4-228ENST00000565393 TRIM11Q96F44 468 aa6.47□□□□□ -1.37
TCF4-228ENST00000565393 NAF1Q96HR8 494 aaKnown RBP6.47□□□□□ -1.37
TCF4-228ENST00000565393 DEPDC7Q96QD5 511 aa6.47□□□□□ -1.37
TCF4-228ENST00000565393 TUBGCP5Q96RT8 1024 aa6.47□□□□□ -1.37
TCF4-228ENST00000565393 KCTD15Q96SI1 283 aaPredicted RBP6.47□□□□□ -1.37
TCF4-228ENST00000565393 EIF3CQ99613 913 aaKnown RBP6.47□□□□□ -1.37
TCF4-228ENST00000565393 APOOQ9BUR5 198 aa6.47□□□□□ -1.37
TCF4-228ENST00000565393 EDEM3Q9BZQ6 932 aa6.47□□□□□ -1.37
TCF4-228ENST00000565393 TRIM7Q9C029 511 aa6.47□□□□□ -1.37
TCF4-228ENST00000565393 TCEAL2Q9H3H9 227 aaPredicted RBP6.47□□□□□ -1.37
TCF4-228ENST00000565393 LRRC19Q9H756 370 aa6.47□□□□□ -1.37
TCF4-228ENST00000565393 ATP13A3Q9H7F0 1226 aa6.47□□□□□ -1.37
TCF4-228ENST00000565393 SYNDIG1Q9H7V2 258 aa6.47□□□□□ -1.37
TCF4-228ENST00000565393 PCDH12Q9NPG4 1184 aa6.47□□□□□ -1.37
TCF4-228ENST00000565393 SCUBE2Q9NQ36 999 aa6.47□□□□□ -1.37
TCF4-228ENST00000565393 CWC15Q9P013 229 aaKnown RBP6.47□□□□□ -1.37
TCF4-228ENST00000565393 SIRPGQ9P1W8 387 aa6.47□□□□□ -1.37
TCF4-228ENST00000565393 MOSPD1Q9UJG1 213 aa6.47□□□□□ -1.37
TCF4-228ENST00000565393 PADI4Q9UM07 663 aa6.47□□□□□ -1.37
TCF4-228ENST00000565393 OR1A2Q9Y585 309 aa6.47□□□□□ -1.37
TCF4-228ENST00000565393 PCDHB1Q9Y5F3 818 aa6.47□□□□□ -1.37
TCF4-228ENST00000565393 BZW2Q9Y6E2 419 aaKnown RBP6.47□□□□□ -1.37
TCF4-228ENST00000565393 SCINQ9Y6U3 715 aa6.47□□□□□ -1.37
TCF4-228ENST00000565393 VPS13AQ96RL7 3174 aa6.47□□□□□ -1.37
TCF4-228ENST00000565393 MUC22E2RYF6 1773 aaPredicted RBP6.46□□□□□ -1.37
TCF4-228ENST00000565393 DNAH14Q0VDD8 3507 aa6.46□□□□□ -1.37
TCF4-228ENST00000565393 EME2A4GXA9 379 aaPredicted RBP6.46□□□□□ -1.38
TCF4-228ENST00000565393 H3BRJ5 948 aa6.46□□□□□ -1.38
TCF4-228ENST00000565393 TLX3O43711 291 aaPredicted RBP6.46□□□□□ -1.38
TCF4-228ENST00000565393 BRINP1O60477 761 aa6.46□□□□□ -1.38
TCF4-228ENST00000565393 LRCH4O75427 683 aa6.46□□□□□ -1.38
TCF4-228ENST00000565393 RASGRP1O95267 797 aa6.46□□□□□ -1.38
TCF4-228ENST00000565393 GP1BAP07359 652 aa6.46□□□□□ -1.38
TCF4-228ENST00000565393 C6P13671 934 aa6.46□□□□□ -1.38
TCF4-228ENST00000565393 TGM2P21980 687 aa6.46□□□□□ -1.38
TCF4-228ENST00000565393 RBMS1P29558 406 aaKnown RBP6.46□□□□□ -1.38
TCF4-228ENST00000565393 RGRP47804 291 aa6.46□□□□□ -1.38
TCF4-228ENST00000565393 CSNK1DP48730 415 aa6.46□□□□□ -1.38
TCF4-228ENST00000565393 PEX5P50542 639 aa6.46□□□□□ -1.38
TCF4-228ENST00000565393 HK3P52790 923 aa6.46□□□□□ -1.38
TCF4-228ENST00000565393 UBASH3AP57075 661 aa6.46□□□□□ -1.38
TCF4-228ENST00000565393 SRP54P61011 504 aaKnown RBP6.46□□□□□ -1.38
TCF4-228ENST00000565393 GABREP78334 506 aa6.46□□□□□ -1.38
TCF4-228ENST00000565393 FANCCQ00597 558 aa6.46□□□□□ -1.38
TCF4-228ENST00000565393 ITKQ08881 620 aa6.46□□□□□ -1.38
TCF4-228ENST00000565393 PIGHQ14442 188 aaPredicted RBP6.46□□□□□ -1.38
TCF4-228ENST00000565393 RFTN1Q14699 578 aaPredicted RBP6.46□□□□□ -1.38
TCF4-228ENST00000565393 LBRQ14739 615 aaKnown RBP6.46□□□□□ -1.38
TCF4-228ENST00000565393 ACAP1Q15027 740 aa6.46□□□□□ -1.38
TCF4-228ENST00000565393 ACOX1Q15067 660 aa6.46□□□□□ -1.38
TCF4-228ENST00000565393 IRF4Q15306 451 aa6.46□□□□□ -1.38
TCF4-228ENST00000565393 ELOCQ15369 112 aa6.46□□□□□ -1.38
TCF4-228ENST00000565393 SOWAHCQ53LP3 525 aaPredicted RBP6.46□□□□□ -1.38
TCF4-228ENST00000565393 CCDC122Q5T0U0 273 aa6.46□□□□□ -1.38
TCF4-228ENST00000565393 DENND2CQ68D51 928 aa6.46□□□□□ -1.38
TCF4-228ENST00000565393 ARHGAP36Q6ZRI8 547 aa6.46□□□□□ -1.38
TCF4-228ENST00000565393 GKN2Q86XP6 184 aa6.46□□□□□ -1.38
TCF4-228ENST00000565393 PSTKQ8IV42 348 aaKnown RBP6.46□□□□□ -1.38
TCF4-228ENST00000565393 BBS5Q8N3I7 341 aa6.46□□□□□ -1.38
TCF4-228ENST00000565393 LZTR1Q8N653 840 aa6.46□□□□□ -1.38
TCF4-228ENST00000565393 TP53I13Q8NBR0 393 aaPredicted RBP6.46□□□□□ -1.38
TCF4-228ENST00000565393 ATL2Q8NHH9 583 aa6.46□□□□□ -1.38
TCF4-228ENST00000565393 VOPP1Q96AW1 172 aa6.46□□□□□ -1.38
TCF4-228ENST00000565393 CRELD1Q96HD1 420 aa6.46□□□□□ -1.38
TCF4-228ENST00000565393 PEBP4Q96S96 227 aa6.46□□□□□ -1.38
TCF4-228ENST00000565393 SYT11Q9BT88 431 aa6.46□□□□□ -1.38
TCF4-228ENST00000565393 CLPBQ9H078 707 aa6.46□□□□□ -1.38
TCF4-228ENST00000565393 ISCUQ9H1K1 167 aa6.46□□□□□ -1.38
TCF4-228ENST00000565393 POLR1BQ9H9Y6 1135 aa6.46□□□□□ -1.38
TCF4-228ENST00000565393 PDFQ9HBH1 243 aa6.46□□□□□ -1.38
TCF4-228ENST00000565393 GPR27Q9NS67 375 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms