RNA–Protein interactions for RNA: ENST00000565377.1

RPUSD1-205, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

TSL 2

Gene RPUSD1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-205ENST00000565377 C17orf53Q8N3J3 647 aaPredicted RBP20.26■□□□□ 0.83
RPUSD1-205ENST00000565377 CCDC89Q8N998 374 aa20.26■□□□□ 0.83
RPUSD1-205ENST00000565377 ARRDC2Q8TBH0 407 aa20.26■□□□□ 0.83
RPUSD1-205ENST00000565377 COG1Q8WTW3 980 aa20.26■□□□□ 0.83
RPUSD1-205ENST00000565377 PDCD6IPQ8WUM4 868 aaKnown RBP20.26■□□□□ 0.83
RPUSD1-205ENST00000565377 C1orf54Q8WWF1 131 aa20.26■□□□□ 0.83
RPUSD1-205ENST00000565377 RTP4Q96DX8 246 aa20.26■□□□□ 0.83
RPUSD1-205ENST00000565377 ZNF419Q96HQ0 510 aaPredicted RBP20.26■□□□□ 0.83
RPUSD1-205ENST00000565377 FEM1CQ96JP0 617 aa20.26■□□□□ 0.83
RPUSD1-205ENST00000565377 FAM118BQ9BPY3 351 aa20.26■□□□□ 0.83
RPUSD1-205ENST00000565377 GBA3Q9H227 469 aa20.26■□□□□ 0.83
RPUSD1-205ENST00000565377 USP29Q9HBJ7 922 aa20.26■□□□□ 0.83
RPUSD1-205ENST00000565377 FAM153AQ9UHL3 310 aa20.26■□□□□ 0.83
RPUSD1-205ENST00000565377 MBD1Q9UIS9 605 aaPredicted RBP20.26■□□□□ 0.83
RPUSD1-205ENST00000565377 INVSQ9Y283 1065 aa20.26■□□□□ 0.83
RPUSD1-205ENST00000565377 PCDHGC4Q9Y5F7 938 aa20.26■□□□□ 0.83
RPUSD1-205ENST00000565377 SHROOM3Q8TF72 1996 aa20.26■□□□□ 0.83
RPUSD1-205ENST00000565377 UPK3BL1B0FP48 263 aa20.25■□□□□ 0.83
RPUSD1-205ENST00000565377 UPK3BL2E5RIL1 263 aa20.25■□□□□ 0.83
RPUSD1-205ENST00000565377 PGLSO95336 258 aa20.25■□□□□ 0.83
RPUSD1-205ENST00000565377 CPP00450 1065 aa20.25■□□□□ 0.83
RPUSD1-205ENST00000565377 ACSL1P33121 698 aa20.25■□□□□ 0.83
RPUSD1-205ENST00000565377 CD86P42081 329 aa20.25■□□□□ 0.83
RPUSD1-205ENST00000565377 CCR5P51681 352 aa20.25■□□□□ 0.83
RPUSD1-205ENST00000565377 EPHB1P54762 984 aa20.25■□□□□ 0.83
RPUSD1-205ENST00000565377 MPP3Q13368 585 aa20.25■□□□□ 0.83
RPUSD1-205ENST00000565377 SIX1Q15475 284 aaPredicted RBP20.25■□□□□ 0.83
RPUSD1-205ENST00000565377 LAIR1Q6GTX8 287 aa20.25■□□□□ 0.83
RPUSD1-205ENST00000565377 KIAA1161Q6NSJ0 714 aa20.25■□□□□ 0.83
RPUSD1-205ENST00000565377 SYT10Q6XYQ8 523 aa20.25■□□□□ 0.83
RPUSD1-205ENST00000565377 FAM160A2Q8N612 972 aaPredicted RBP20.25■□□□□ 0.83
RPUSD1-205ENST00000565377 FAM71DQ8N9W8 422 aa20.25■□□□□ 0.83
RPUSD1-205ENST00000565377 ATG4AQ8WYN0 398 aa20.25■□□□□ 0.83
RPUSD1-205ENST00000565377 IFT43Q96FT9 208 aa20.25■□□□□ 0.83
RPUSD1-205ENST00000565377 RUNDC3BQ96NL0 473 aa20.25■□□□□ 0.83
RPUSD1-205ENST00000565377 SRPK1Q96SB4 655 aaKnown RBP20.25■□□□□ 0.83
RPUSD1-205ENST00000565377 TMEM121Q9BTD3 319 aa20.25■□□□□ 0.83
RPUSD1-205ENST00000565377 CEP41Q9BYV8 373 aa20.25■□□□□ 0.83
RPUSD1-205ENST00000565377 SERGEFQ9UGK8 458 aa20.25■□□□□ 0.83
RPUSD1-205ENST00000565377 PCDHB9Q9Y5E1 797 aa20.25■□□□□ 0.83
RPUSD1-205ENST00000565377 PLXND1Q9Y4D7 1925 aa20.24■□□□□ 0.83
RPUSD1-205ENST00000565377 CYP2A6P11509 494 aaPredicted RBP20.24■□□□□ 0.83
RPUSD1-205ENST00000565377 GEMP55040 296 aa20.24■□□□□ 0.83
RPUSD1-205ENST00000565377 RPS21P63220 83 aaKnown RBP20.24■□□□□ 0.83
RPUSD1-205ENST00000565377 SKOR1P84550 965 aa20.24■□□□□ 0.83
RPUSD1-205ENST00000565377 NIPAL4Q0D2K0 466 aa20.24■□□□□ 0.83
RPUSD1-205ENST00000565377 SRSF5Q13243 272 aaKnown RBP20.24■□□□□ 0.83
RPUSD1-205ENST00000565377 USP45Q70EL2 814 aa20.24■□□□□ 0.83
RPUSD1-205ENST00000565377 GSTA5Q7RTV2 222 aa20.24■□□□□ 0.83
RPUSD1-205ENST00000565377 RABEPKQ7Z6M1 372 aa20.24■□□□□ 0.83
RPUSD1-205ENST00000565377 TRIM69Q86WT6 500 aa20.24■□□□□ 0.83
RPUSD1-205ENST00000565377 ATL2Q8NHH9 583 aa20.24■□□□□ 0.83
RPUSD1-205ENST00000565377 GRK7Q8WTQ7 553 aa20.24■□□□□ 0.83
RPUSD1-205ENST00000565377 MS4A14Q96JA4 679 aa20.24■□□□□ 0.83
RPUSD1-205ENST00000565377 C16orf45Q96MC5 204 aaPredicted RBP20.24■□□□□ 0.83
RPUSD1-205ENST00000565377 TDRD1Q9BXT4 1180 aaKnown RBP20.24■□□□□ 0.83
RPUSD1-205ENST00000565377 PCDH9Q9HC56 1237 aa20.24■□□□□ 0.83
RPUSD1-205ENST00000565377 SMG5Q9UPR3 1016 aaKnown RBP20.24■□□□□ 0.83
RPUSD1-205ENST00000565377 PCDHGA5Q9Y5G8 931 aa20.24■□□□□ 0.83
RPUSD1-205ENST00000565377 FADS3Q9Y5Q0 445 aa20.24■□□□□ 0.83
RPUSD1-205ENST00000565377 FAM47DPA6NHR8 397 aa20.23■□□□□ 0.83
RPUSD1-205ENST00000565377 METTL12A8MUP2 240 aa20.23■□□□□ 0.83
RPUSD1-205ENST00000565377 MEI4A8MW99 385 aa20.23■□□□□ 0.83
RPUSD1-205ENST00000565377 PROB1E7EW31 1015 aa20.23■□□□□ 0.83
RPUSD1-205ENST00000565377 PSMD3O43242 534 aa20.23■□□□□ 0.83
RPUSD1-205ENST00000565377 PCDH8O95206 1070 aa20.23■□□□□ 0.83
RPUSD1-205ENST00000565377 EPOP01588 193 aa20.23■□□□□ 0.83
RPUSD1-205ENST00000565377 LMNAP02545 664 aaKnown RBP20.23■□□□□ 0.83
RPUSD1-205ENST00000565377 TIMP2P16035 220 aa20.23■□□□□ 0.83
RPUSD1-205ENST00000565377 NFKB1P19838 968 aa20.23■□□□□ 0.83
RPUSD1-205ENST00000565377 BCKDHBP21953 392 aa20.23■□□□□ 0.83
RPUSD1-205ENST00000565377 HOXD12P35452 270 aa20.23■□□□□ 0.83
RPUSD1-205ENST00000565377 METAP1P53582 386 aa20.23■□□□□ 0.83
RPUSD1-205ENST00000565377 TRAF2Q12933 501 aa20.23■□□□□ 0.83
RPUSD1-205ENST00000565377 SNX1Q13596 522 aa20.23■□□□□ 0.83
RPUSD1-205ENST00000565377 CYP1B1Q16678 543 aa20.23■□□□□ 0.83
RPUSD1-205ENST00000565377 PARP6Q2NL67 630 aa20.23■□□□□ 0.83
RPUSD1-205ENST00000565377 LYSMD4Q5XG99 296 aa20.23■□□□□ 0.83
RPUSD1-205ENST00000565377 KIAA0895LQ68EN5 471 aa20.23■□□□□ 0.83
RPUSD1-205ENST00000565377 PRPF39Q86UA1 669 aaKnown RBP20.23■□□□□ 0.83
RPUSD1-205ENST00000565377 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.23■□□□□ 0.83
RPUSD1-205ENST00000565377 C12orf50Q8NA57 414 aaPredicted RBP20.23■□□□□ 0.83
RPUSD1-205ENST00000565377 MAGOHBQ96A72 148 aaKnown RBP20.23■□□□□ 0.83
RPUSD1-205ENST00000565377 VOPP1Q96AW1 172 aa20.23■□□□□ 0.83
RPUSD1-205ENST00000565377 RBM15Q96T37 977 aaKnown RBP eCLIP20.23■□□□□ 0.83
RPUSD1-205ENST00000565377 CD93Q9NPY3 652 aa20.23■□□□□ 0.83
RPUSD1-205ENST00000565377 KCTD5Q9NXV2 234 aa20.23■□□□□ 0.83
RPUSD1-205ENST00000565377 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.23■□□□□ 0.83
RPUSD1-205ENST00000565377 SUSD2Q9UGT4 822 aa20.23■□□□□ 0.83
RPUSD1-205ENST00000565377 GMEB2Q9UKD1 530 aa20.23■□□□□ 0.83
RPUSD1-205ENST00000565377 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.22■□□□□ 0.83
RPUSD1-205ENST00000565377 TTC24A2A3L6 582 aaPredicted RBP20.22■□□□□ 0.83
RPUSD1-205ENST00000565377 AREL1O15033 823 aa20.22■□□□□ 0.83
RPUSD1-205ENST00000565377 FZD6O60353 706 aa20.22■□□□□ 0.83
RPUSD1-205ENST00000565377 IFNB1P01574 187 aa20.22■□□□□ 0.83
RPUSD1-205ENST00000565377 MMP2P08253 660 aa20.22■□□□□ 0.83
RPUSD1-205ENST00000565377 CD68P34810 354 aaPredicted RBP20.22■□□□□ 0.83
RPUSD1-205ENST00000565377 GRIA4P48058 902 aa20.22■□□□□ 0.83
RPUSD1-205ENST00000565377 FNTAP49354 379 aa20.22■□□□□ 0.83
RPUSD1-205ENST00000565377 DHPSP49366 369 aaPredicted RBP20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms