RNA–Protein interactions for RNA: ENST00000564970.1

PTPN9-204, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-204ENST00000564970 STRA8Q7Z7C7 330 aa6.34□□□□□ -1.39
PTPN9-204ENST00000564970 RNF180Q86T96 592 aa6.34□□□□□ -1.39
PTPN9-204ENST00000564970 LINC00523Q86TU6 105 aa6.34□□□□□ -1.39
PTPN9-204ENST00000564970 C12orf40Q86WS4 652 aa6.34□□□□□ -1.39
PTPN9-204ENST00000564970 CATSPER3Q86XQ3 398 aa6.34□□□□□ -1.39
PTPN9-204ENST00000564970 LYSMD2Q8IV50 215 aa6.34□□□□□ -1.39
PTPN9-204ENST00000564970 ZC3H7AQ8IWR0 971 aaKnown RBP6.34□□□□□ -1.39
PTPN9-204ENST00000564970 SCML4Q8N228 414 aa6.34□□□□□ -1.39
PTPN9-204ENST00000564970 GUF1Q8N442 669 aaKnown RBP6.34□□□□□ -1.39
PTPN9-204ENST00000564970 STX19Q8N4C7 294 aa6.34□□□□□ -1.39
PTPN9-204ENST00000564970 ZCCHC9Q8N567 271 aaKnown RBP6.34□□□□□ -1.39
PTPN9-204ENST00000564970 ANKRD13CQ8N6S4 541 aa6.34□□□□□ -1.39
PTPN9-204ENST00000564970 C2orf69Q8N8R5 385 aa6.34□□□□□ -1.39
PTPN9-204ENST00000564970 TMEM102Q8N9M5 508 aaPredicted RBP6.34□□□□□ -1.39
PTPN9-204ENST00000564970 IL17RDQ8NFM7 739 aa6.34□□□□□ -1.39
PTPN9-204ENST00000564970 PHOSPHO2Q8TCD6 241 aa6.34□□□□□ -1.39
PTPN9-204ENST00000564970 TCP10LQ8TDR4 215 aa6.34□□□□□ -1.39
PTPN9-204ENST00000564970 SNX19Q92543 992 aa6.34□□□□□ -1.39
PTPN9-204ENST00000564970 ELMO1Q92556 727 aa6.34□□□□□ -1.39
PTPN9-204ENST00000564970 SNAPC3Q92966 411 aa6.34□□□□□ -1.39
PTPN9-204ENST00000564970 SLC25A36Q96CQ1 311 aa6.34□□□□□ -1.39
PTPN9-204ENST00000564970 MSANTD3Q96H12 275 aa6.34□□□□□ -1.39
PTPN9-204ENST00000564970 RNF170Q96K19 258 aa6.34□□□□□ -1.39
PTPN9-204ENST00000564970 KLHL32Q96NJ5 620 aa6.34□□□□□ -1.39
PTPN9-204ENST00000564970 CRAMP1Q96RY5 1269 aa6.34□□□□□ -1.39
PTPN9-204ENST00000564970 CSRNP1Q96S65 589 aa6.34□□□□□ -1.39
PTPN9-204ENST00000564970 C7orf25Q9BPX7 421 aa6.34□□□□□ -1.39
PTPN9-204ENST00000564970 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.34□□□□□ -1.39
PTPN9-204ENST00000564970 RACGAP1Q9H0H5 632 aa6.34□□□□□ -1.39
PTPN9-204ENST00000564970 GHITMQ9H3K2 345 aa6.34□□□□□ -1.39
PTPN9-204ENST00000564970 COG4Q9H9E3 785 aa6.34□□□□□ -1.39
PTPN9-204ENST00000564970 NMUR1Q9HB89 426 aa6.34□□□□□ -1.39
PTPN9-204ENST00000564970 LRRC4CQ9HCJ2 640 aa6.34□□□□□ -1.39
PTPN9-204ENST00000564970 PRDM11Q9NQV5 511 aa6.34□□□□□ -1.39
PTPN9-204ENST00000564970 SEC31BQ9NQW1 1179 aa6.34□□□□□ -1.39
PTPN9-204ENST00000564970 BIN3Q9NQY0 253 aa6.34□□□□□ -1.39
PTPN9-204ENST00000564970 TBC1D22BQ9NU19 505 aa6.34□□□□□ -1.39
PTPN9-204ENST00000564970 MID2Q9UJV3 735 aa6.34□□□□□ -1.39
PTPN9-204ENST00000564970 RPS6KA6Q9UK32 745 aa6.34□□□□□ -1.39
PTPN9-204ENST00000564970 PCOLCE2Q9UKZ9 415 aa6.34□□□□□ -1.39
PTPN9-204ENST00000564970 RNF112Q9ULX5 631 aa6.34□□□□□ -1.39
PTPN9-204ENST00000564970 USTQ9Y2C2 406 aa6.34□□□□□ -1.39
PTPN9-204ENST00000564970 MRPS7Q9Y2R9 242 aaKnown RBP6.34□□□□□ -1.39
PTPN9-204ENST00000564970 TNPO3Q9Y5L0 923 aaKnown RBP6.34□□□□□ -1.39
PTPN9-204ENST00000564970 HRH3Q9Y5N1 445 aa6.34□□□□□ -1.39
PTPN9-204ENST00000564970 TRPM3Q9HCF6 1732 aaPredicted RBP6.33□□□□□ -1.4
PTPN9-204ENST00000564970 LRRC37A3O60309 1634 aa6.33□□□□□ -1.4
PTPN9-204ENST00000564970 A0A087X0T9 212 aa6.33□□□□□ -1.4
PTPN9-204ENST00000564970 A0A0G2JPF8 293 aa6.33□□□□□ -1.4
PTPN9-204ENST00000564970 GSTTP1A0A1W2PQM5 241 aa6.33□□□□□ -1.4
PTPN9-204ENST00000564970 FAM92AA1XBS5 289 aa6.33□□□□□ -1.4
PTPN9-204ENST00000564970 SDR42E2A6NKP2 422 aa6.33□□□□□ -1.4
PTPN9-204ENST00000564970 HNRNPCL3B7ZW38 293 aa6.33□□□□□ -1.4
PTPN9-204ENST00000564970 F6X3S4 739 aa6.33□□□□□ -1.4
PTPN9-204ENST00000564970 M0R3G1 203 aa6.33□□□□□ -1.4
PTPN9-204ENST00000564970 STX16O14662 325 aa6.33□□□□□ -1.4
PTPN9-204ENST00000564970 CAPN5O15484 640 aaPredicted RBP6.33□□□□□ -1.4
PTPN9-204ENST00000564970 HRO43593 1189 aa6.33□□□□□ -1.4
PTPN9-204ENST00000564970 GREM1O60565 184 aa6.33□□□□□ -1.4
PTPN9-204ENST00000564970 CIAO1O76071 339 aa6.33□□□□□ -1.4
PTPN9-204ENST00000564970 ALDH1A2O94788 518 aa6.33□□□□□ -1.4
PTPN9-204ENST00000564970 GABARAPO95166 117 aa6.33□□□□□ -1.4
PTPN9-204ENST00000564970 HTR3BO95264 441 aa6.33□□□□□ -1.4
PTPN9-204ENST00000564970 CRYABP02511 175 aaKnown RBP6.33□□□□□ -1.4
PTPN9-204ENST00000564970 C1QBP02746 253 aa6.33□□□□□ -1.4
PTPN9-204ENST00000564970 SERPINB2P05120 415 aa6.33□□□□□ -1.4
PTPN9-204ENST00000564970 NFICP08651 508 aa6.33□□□□□ -1.4
PTPN9-204ENST00000564970 TRIM49P0CI25 452 aa6.33□□□□□ -1.4
PTPN9-204ENST00000564970 TRIM49CP0CI26 452 aa6.33□□□□□ -1.4
PTPN9-204ENST00000564970 HNRNPCL4P0DMR1 293 aa6.33□□□□□ -1.4
PTPN9-204ENST00000564970 IL1R1P14778 569 aa6.33□□□□□ -1.4
PTPN9-204ENST00000564970 CSF2RAP15509 400 aa6.33□□□□□ -1.4
PTPN9-204ENST00000564970 CREB1P16220 341 aa6.33□□□□□ -1.4
PTPN9-204ENST00000564970 RFX1P22670 979 aa6.33□□□□□ -1.4
PTPN9-204ENST00000564970 MMP8P22894 467 aa6.33□□□□□ -1.4
PTPN9-204ENST00000564970 HLA-DMAP28067 261 aa6.33□□□□□ -1.4
PTPN9-204ENST00000564970 RPA3P35244 121 aaPredicted RBP6.33□□□□□ -1.4
PTPN9-204ENST00000564970 TIE1P35590 1138 aa6.33□□□□□ -1.4
PTPN9-204ENST00000564970 EIF2S3P41091 472 aaKnown RBP6.33□□□□□ -1.4
PTPN9-204ENST00000564970 ETV6P41212 452 aa6.33□□□□□ -1.4
PTPN9-204ENST00000564970 VEGFCP49767 419 aa6.33□□□□□ -1.4
PTPN9-204ENST00000564970 MYL6P60660 151 aa6.33□□□□□ -1.4
PTPN9-204ENST00000564970 RGS1Q08116 209 aa6.33□□□□□ -1.4
PTPN9-204ENST00000564970 STX4Q12846 297 aa6.33□□□□□ -1.4
PTPN9-204ENST00000564970 NR5A1Q13285 461 aa6.33□□□□□ -1.4
PTPN9-204ENST00000564970 PLD1Q13393 1074 aa6.33□□□□□ -1.4
PTPN9-204ENST00000564970 PMS2P3Q13401 168 aa6.33□□□□□ -1.4
PTPN9-204ENST00000564970 NTRK3Q16288 839 aa6.33□□□□□ -1.4
PTPN9-204ENST00000564970 PSMD5Q16401 504 aa6.33□□□□□ -1.4
PTPN9-204ENST00000564970 PFKFB4Q16877 469 aa6.33□□□□□ -1.4
PTPN9-204ENST00000564970 EIF2S3LQ2VIR3 472 aaKnown RBP6.33□□□□□ -1.4
PTPN9-204ENST00000564970 MGAT5BQ3V5L5 792 aa6.33□□□□□ -1.4
PTPN9-204ENST00000564970 PRR16Q569H4 304 aa6.33□□□□□ -1.4
PTPN9-204ENST00000564970 DALRD3Q5D0E6 543 aaKnown RBP6.33□□□□□ -1.4
PTPN9-204ENST00000564970 ARMCX4Q5H9R4 360 aa6.33□□□□□ -1.4
PTPN9-204ENST00000564970 NHSL2Q5HYW2 709 aa6.33□□□□□ -1.4
PTPN9-204ENST00000564970 TCTE1Q5JU00 501 aa6.33□□□□□ -1.4
PTPN9-204ENST00000564970 CLLU1Q5K131 121 aa6.33□□□□□ -1.4
PTPN9-204ENST00000564970 LGSNQ5TDP6 509 aa6.33□□□□□ -1.4
PTPN9-204ENST00000564970 LRRC66Q68CR7 880 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms