RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 TBC1D15Q8TC07 691 aa20.65■□□□□ 0.9
MAP1LC3B-206ENST00000564844 EDEM1Q92611 657 aa20.65■□□□□ 0.9
MAP1LC3B-206ENST00000564844 C3orf30Q96M34 536 aa20.65■□□□□ 0.9
MAP1LC3B-206ENST00000564844 TCF12Q99081 682 aa20.65■□□□□ 0.9
MAP1LC3B-206ENST00000564844 GPR22Q99680 433 aa20.65■□□□□ 0.9
MAP1LC3B-206ENST00000564844 GPATCH1Q9BRR8 931 aaKnown RBP20.65■□□□□ 0.9
MAP1LC3B-206ENST00000564844 ZFYVE28Q9HCC9 887 aa20.65■□□□□ 0.9
MAP1LC3B-206ENST00000564844 LTB4R2Q9NPC1 389 aa20.65■□□□□ 0.9
MAP1LC3B-206ENST00000564844 ELK4P28324 431 aa20.64■□□□□ 0.9
MAP1LC3B-206ENST00000564844 PLIN5Q00G26 463 aa20.64■□□□□ 0.9
MAP1LC3B-206ENST00000564844 PFKPQ01813 784 aa20.64■□□□□ 0.9
MAP1LC3B-206ENST00000564844 ZNF470Q6ECI4 717 aa20.64■□□□□ 0.9
MAP1LC3B-206ENST00000564844 DCDC5Q6ZRR9 648 aa20.64■□□□□ 0.9
MAP1LC3B-206ENST00000564844 IL22Q9GZX6 179 aa20.64■□□□□ 0.9
MAP1LC3B-206ENST00000564844 TRIM24O15164 1050 aa20.64■□□□□ 0.89
MAP1LC3B-206ENST00000564844 ZBTB7AO95365 584 aa20.64■□□□□ 0.89
MAP1LC3B-206ENST00000564844 PORP16435 677 aaPredicted RBP20.64■□□□□ 0.89
MAP1LC3B-206ENST00000564844 CHRNA4P43681 627 aa20.64■□□□□ 0.89
MAP1LC3B-206ENST00000564844 GLUD2P49448 558 aa20.64■□□□□ 0.89
MAP1LC3B-206ENST00000564844 TPI1P60174 286 aa20.64■□□□□ 0.89
MAP1LC3B-206ENST00000564844 TNK2Q07912 1038 aa20.64■□□□□ 0.89
MAP1LC3B-206ENST00000564844 HABP4Q5JVS0 413 aaKnown RBP20.64■□□□□ 0.89
MAP1LC3B-206ENST00000564844 BTLAQ7Z6A9 289 aa20.64■□□□□ 0.89
MAP1LC3B-206ENST00000564844 CUZD1Q86UP6 607 aa20.64■□□□□ 0.89
MAP1LC3B-206ENST00000564844 CROCCP3Q8IVE0 287 aa20.64■□□□□ 0.89
MAP1LC3B-206ENST00000564844 CMTR2Q8IYT2 770 aaKnown RBP20.64■□□□□ 0.89
MAP1LC3B-206ENST00000564844 CENPIQ92674 756 aaPredicted RBP20.64■□□□□ 0.89
MAP1LC3B-206ENST00000564844 BIRC8Q96P09 236 aa20.64■□□□□ 0.89
MAP1LC3B-206ENST00000564844 SIK2Q9H0K1 926 aa20.64■□□□□ 0.89
MAP1LC3B-206ENST00000564844 HIPK3Q9H422 1215 aa20.64■□□□□ 0.89
MAP1LC3B-206ENST00000564844 RHOJQ9H4E5 214 aa20.64■□□□□ 0.89
MAP1LC3B-206ENST00000564844 PCDH12Q9NPG4 1184 aa20.64■□□□□ 0.89
MAP1LC3B-206ENST00000564844 TMEM221A6NGB7 291 aa20.64■□□□□ 0.89
MAP1LC3B-206ENST00000564844 MAN1A2O60476 641 aa20.64■□□□□ 0.89
MAP1LC3B-206ENST00000564844 SNAP29O95721 258 aa20.64■□□□□ 0.89
MAP1LC3B-206ENST00000564844 BDNFP23560 247 aa20.64■□□□□ 0.89
MAP1LC3B-206ENST00000564844 MATKP42679 507 aa20.64■□□□□ 0.89
MAP1LC3B-206ENST00000564844 PCSK7Q16549 785 aa20.64■□□□□ 0.89
MAP1LC3B-206ENST00000564844 SIX6OS1Q8N1H7 587 aa20.64■□□□□ 0.89
MAP1LC3B-206ENST00000564844 TANKQ92844 425 aa20.64■□□□□ 0.89
MAP1LC3B-206ENST00000564844 C11orf84Q9BUA3 381 aaPredicted RBP20.64■□□□□ 0.89
MAP1LC3B-206ENST00000564844 EIF2B3Q9NR50 452 aaKnown RBP20.64■□□□□ 0.89
MAP1LC3B-206ENST00000564844 GJD2Q9UKL4 321 aa20.64■□□□□ 0.89
MAP1LC3B-206ENST00000564844 SQORQ9Y6N5 450 aa20.64■□□□□ 0.89
MAP1LC3B-206ENST00000564844 LRRC14BA6NHZ5 514 aa20.63■□□□□ 0.89
MAP1LC3B-206ENST00000564844 DFFAO00273 331 aa20.63■□□□□ 0.89
MAP1LC3B-206ENST00000564844 TOR1BO14657 336 aa20.63■□□□□ 0.89
MAP1LC3B-206ENST00000564844 POLR2IP36954 125 aaKnown RBP20.63■□□□□ 0.89
MAP1LC3B-206ENST00000564844 HALP42357 657 aa20.63■□□□□ 0.89
MAP1LC3B-206ENST00000564844 RAB10P61026 200 aa20.63■□□□□ 0.89
MAP1LC3B-206ENST00000564844 PHEXP78562 749 aa20.63■□□□□ 0.89
MAP1LC3B-206ENST00000564844 BST2Q10589 180 aaKnown RBP20.63■□□□□ 0.89
MAP1LC3B-206ENST00000564844 CBLBQ13191 982 aa20.63■□□□□ 0.89
MAP1LC3B-206ENST00000564844 OR2T34Q8NGX1 318 aa20.63■□□□□ 0.89
MAP1LC3B-206ENST00000564844 OR2T3Q8NH03 318 aa20.63■□□□□ 0.89
MAP1LC3B-206ENST00000564844 GFM2Q969S9 779 aaKnown RBP20.63■□□□□ 0.89
MAP1LC3B-206ENST00000564844 ABHD8Q96I13 439 aa20.63■□□□□ 0.89
MAP1LC3B-206ENST00000564844 ASB7Q9H672 318 aa20.63■□□□□ 0.89
MAP1LC3B-206ENST00000564844 PRMT7Q9NVM4 692 aaPredicted RBP20.63■□□□□ 0.89
MAP1LC3B-206ENST00000564844 FADS3Q9Y5Q0 445 aa20.63■□□□□ 0.89
MAP1LC3B-206ENST00000564844 MAGED1Q9Y5V3 778 aaPredicted RBP20.63■□□□□ 0.89
MAP1LC3B-206ENST00000564844 TCRBV3S1A0A5B6 114 aa20.63■□□□□ 0.89
MAP1LC3B-206ENST00000564844 DHRS12A0PJE2 317 aa20.63■□□□□ 0.89
MAP1LC3B-206ENST00000564844 TRPC5OSA6NMA1 111 aa20.63■□□□□ 0.89
MAP1LC3B-206ENST00000564844 NME4O00746 187 aa20.63■□□□□ 0.89
MAP1LC3B-206ENST00000564844 MATN1P21941 496 aa20.63■□□□□ 0.89
MAP1LC3B-206ENST00000564844 BCAT1P54687 386 aa20.63■□□□□ 0.89
MAP1LC3B-206ENST00000564844 BFSP2Q13515 415 aa20.63■□□□□ 0.89
MAP1LC3B-206ENST00000564844 PPP4R4Q6NUP7 873 aa20.63■□□□□ 0.89
MAP1LC3B-206ENST00000564844 RWDD4Q6NW29 188 aaKnown RBP20.63■□□□□ 0.89
MAP1LC3B-206ENST00000564844 CCDC97Q96F63 343 aaPredicted RBP20.63■□□□□ 0.89
MAP1LC3B-206ENST00000564844 VPS50Q96JG6 964 aa20.63■□□□□ 0.89
MAP1LC3B-206ENST00000564844 PPP1R10Q96QC0 940 aaKnown RBP20.63■□□□□ 0.89
MAP1LC3B-206ENST00000564844 CASS4Q9NQ75 786 aa20.63■□□□□ 0.89
MAP1LC3B-206ENST00000564844 H2AFYO75367 372 aaKnown RBP20.62■□□□□ 0.89
MAP1LC3B-206ENST00000564844 BMP10O95393 424 aa20.62■□□□□ 0.89
MAP1LC3B-206ENST00000564844 CYP2B6P20813 491 aa20.62■□□□□ 0.89
MAP1LC3B-206ENST00000564844 EIF2B2P49770 351 aaKnown RBP20.62■□□□□ 0.89
MAP1LC3B-206ENST00000564844 SH3RF2Q8TEC5 729 aa20.62■□□□□ 0.89
MAP1LC3B-206ENST00000564844 FAM167AQ96KS9 214 aa20.62■□□□□ 0.89
MAP1LC3B-206ENST00000564844 MID2Q9UJV3 735 aa20.62■□□□□ 0.89
MAP1LC3B-206ENST00000564844 TRIM17Q9Y577 477 aa20.62■□□□□ 0.89
MAP1LC3B-206ENST00000564844 ST14Q9Y5Y6 855 aa20.62■□□□□ 0.89
MAP1LC3B-206ENST00000564844 SLC1A2P43004 574 aa20.62■□□□□ 0.89
MAP1LC3B-206ENST00000564844 PPP1R8Q12972 351 aaKnown RBP20.62■□□□□ 0.89
MAP1LC3B-206ENST00000564844 CYP51A1Q16850 503 aa20.62■□□□□ 0.89
MAP1LC3B-206ENST00000564844 ISL2Q96A47 359 aa20.62■□□□□ 0.89
MAP1LC3B-206ENST00000564844 GPR78Q96P69 363 aa20.62■□□□□ 0.89
MAP1LC3B-206ENST00000564844 MRPL46Q9H2W6 279 aaKnown RBP20.62■□□□□ 0.89
MAP1LC3B-206ENST00000564844 SACM1LQ9NTJ5 587 aa20.62■□□□□ 0.89
MAP1LC3B-206ENST00000564844 HOXC10Q9NYD6 342 aa20.62■□□□□ 0.89
MAP1LC3B-206ENST00000564844 CNOT11Q9UKZ1 510 aaKnown RBP20.62■□□□□ 0.89
MAP1LC3B-206ENST00000564844 KIAA1257Q9ULG3 409 aa20.62■□□□□ 0.89
MAP1LC3B-206ENST00000564844 BRWD3Q6RI45 1802 aa20.62■□□□□ 0.89
MAP1LC3B-206ENST00000564844 SERPINB7O75635 380 aa20.62■□□□□ 0.89
MAP1LC3B-206ENST00000564844 SLC4A1P02730 911 aa20.62■□□□□ 0.89
MAP1LC3B-206ENST00000564844 PCNAP12004 261 aa20.62■□□□□ 0.89
MAP1LC3B-206ENST00000564844 RFTN1Q14699 578 aaPredicted RBP20.62■□□□□ 0.89
MAP1LC3B-206ENST00000564844 HERC3Q15034 1050 aa20.62■□□□□ 0.89
MAP1LC3B-206ENST00000564844 SLC25A52Q3SY17 297 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms