RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 ZMYM5Q9UJ78 669 aa12.69□□□□□ -0.38
COMMD4-209ENST00000564068 NENFQ9UMX5 172 aa12.69□□□□□ -0.38
COMMD4-209ENST00000564068 TELO2Q9Y4R8 837 aa12.69□□□□□ -0.38
COMMD4-209ENST00000564068 A0A087X1B8 175 aa12.69□□□□□ -0.38
COMMD4-209ENST00000564068 DHX15O43143 795 aaKnown RBP12.69□□□□□ -0.38
COMMD4-209ENST00000564068 CILPO75339 1184 aa12.69□□□□□ -0.38
COMMD4-209ENST00000564068 GUCA1CO95843 209 aa12.69□□□□□ -0.38
COMMD4-209ENST00000564068 FGF3P11487 239 aaPredicted RBP12.69□□□□□ -0.38
COMMD4-209ENST00000564068 ALOX15P16050 662 aaPredicted RBP12.69□□□□□ -0.38
COMMD4-209ENST00000564068 BNIP2Q12982 314 aa12.69□□□□□ -0.38
COMMD4-209ENST00000564068 KRR1Q13601 381 aaKnown RBP12.69□□□□□ -0.38
COMMD4-209ENST00000564068 PCLAFQ15004 111 aa12.69□□□□□ -0.38
COMMD4-209ENST00000564068 PGS1Q32NB8 556 aa12.69□□□□□ -0.38
COMMD4-209ENST00000564068 CACHD1Q5VU97 1274 aa12.69□□□□□ -0.38
COMMD4-209ENST00000564068 ABHD15Q6UXT9 468 aa12.69□□□□□ -0.38
COMMD4-209ENST00000564068 ADGRG6Q86SQ4 1221 aa12.69□□□□□ -0.38
COMMD4-209ENST00000564068 FAM83AQ86UY5 434 aa12.69□□□□□ -0.38
COMMD4-209ENST00000564068 ANKRD13AQ8IZ07 590 aa12.69□□□□□ -0.38
COMMD4-209ENST00000564068 CCDC185Q8N715 623 aa12.69□□□□□ -0.38
COMMD4-209ENST00000564068 SIGLEC10Q96LC7 697 aa12.69□□□□□ -0.38
COMMD4-209ENST00000564068 PPM1MQ96MI6 270 aa12.69□□□□□ -0.38
COMMD4-209ENST00000564068 RPRD1AQ96P16 312 aaPredicted RBP12.69□□□□□ -0.38
COMMD4-209ENST00000564068 KCTD15Q96SI1 283 aaPredicted RBP12.69□□□□□ -0.38
COMMD4-209ENST00000564068 CHID1Q9BWS9 393 aa12.69□□□□□ -0.38
COMMD4-209ENST00000564068 DPY30Q9C005 99 aa12.69□□□□□ -0.38
COMMD4-209ENST00000564068 OAZ3Q9UMX2 235 aa12.69□□□□□ -0.38
COMMD4-209ENST00000564068 SNX8Q9Y5X2 465 aa12.69□□□□□ -0.38
COMMD4-209ENST00000564068 SF3B1O75533 1304 aaKnown RBP eCLIP12.68□□□□□ -0.38
COMMD4-209ENST00000564068 PTPRJQ12913 1337 aa12.68□□□□□ -0.38
COMMD4-209ENST00000564068 SYNDIG1LA6NDD5 238 aa12.68□□□□□ -0.38
COMMD4-209ENST00000564068 TRIM24O15164 1050 aa12.68□□□□□ -0.38
COMMD4-209ENST00000564068 STX7O15400 261 aaKnown RBP12.68□□□□□ -0.38
COMMD4-209ENST00000564068 CST1P01037 141 aa12.68□□□□□ -0.38
COMMD4-209ENST00000564068 CYP4B1P13584 511 aa12.68□□□□□ -0.38
COMMD4-209ENST00000564068 PRKCHP24723 683 aa12.68□□□□□ -0.38
COMMD4-209ENST00000564068 PCSK1P29120 753 aa12.68□□□□□ -0.38
COMMD4-209ENST00000564068 SOX6P35712 828 aa12.68□□□□□ -0.38
COMMD4-209ENST00000564068 MERTKQ12866 999 aa12.68□□□□□ -0.38
COMMD4-209ENST00000564068 CSTF3Q12996 717 aaKnown RBP12.68□□□□□ -0.38
COMMD4-209ENST00000564068 PWP1Q13610 501 aa12.68□□□□□ -0.38
COMMD4-209ENST00000564068 ZBED5Q49AG3 693 aa12.68□□□□□ -0.38
COMMD4-209ENST00000564068 MARC1Q5VT66 337 aa12.68□□□□□ -0.38
COMMD4-209ENST00000564068 ZYG11AQ6WRX3 759 aa12.68□□□□□ -0.38
COMMD4-209ENST00000564068 OTOP3Q7RTS5 596 aa12.68□□□□□ -0.38
COMMD4-209ENST00000564068 CAND1Q86VP6 1230 aaKnown RBP12.68□□□□□ -0.38
COMMD4-209ENST00000564068 DENND6AQ8IWF6 608 aa12.68□□□□□ -0.38
COMMD4-209ENST00000564068 CLYBLQ8N0X4 340 aa12.68□□□□□ -0.38
COMMD4-209ENST00000564068 STX19Q8N4C7 294 aa12.68□□□□□ -0.38
COMMD4-209ENST00000564068 NIPA2Q8N8Q9 360 aa12.68□□□□□ -0.38
COMMD4-209ENST00000564068 DCBLD1Q8N8Z6 715 aa12.68□□□□□ -0.38
COMMD4-209ENST00000564068 PPP1R13LQ8WUF5 828 aa12.68□□□□□ -0.38
COMMD4-209ENST00000564068 CENPNQ96H22 339 aaPredicted RBP12.68□□□□□ -0.38
COMMD4-209ENST00000564068 HGH1Q9BTY7 390 aa12.68□□□□□ -0.38
COMMD4-209ENST00000564068 GIN1Q9NXP7 522 aa12.68□□□□□ -0.38
COMMD4-209ENST00000564068 WWOXQ9NZC7 414 aa12.68□□□□□ -0.38
COMMD4-209ENST00000564068 POLG2Q9UHN1 485 aa12.68□□□□□ -0.38
COMMD4-209ENST00000564068 COPG1Q9Y678 874 aaKnown RBP12.68□□□□□ -0.38
COMMD4-209ENST00000564068 TYW5A2RUC4 315 aaKnown RBP12.68□□□□□ -0.38
COMMD4-209ENST00000564068 CLDN25C9JDP6 229 aa12.68□□□□□ -0.38
COMMD4-209ENST00000564068 BTN3A1O00481 513 aa12.68□□□□□ -0.38
COMMD4-209ENST00000564068 VPS26AO75436 327 aa12.68□□□□□ -0.38
COMMD4-209ENST00000564068 ZNF182P17025 639 aaPredicted RBP12.68□□□□□ -0.38
COMMD4-209ENST00000564068 PNPLA4P41247 253 aa12.68□□□□□ -0.38
COMMD4-209ENST00000564068 PPIL2Q13356 520 aa12.68□□□□□ -0.38
COMMD4-209ENST00000564068 SIAH1Q8IUQ4 282 aa12.68□□□□□ -0.38
COMMD4-209ENST00000564068 ABI1Q8IZP0 508 aa12.68□□□□□ -0.38
COMMD4-209ENST00000564068 DQX1Q8TE96 717 aaKnown RBP12.68□□□□□ -0.38
COMMD4-209ENST00000564068 TMIGD2Q96BF3 282 aa12.68□□□□□ -0.38
COMMD4-209ENST00000564068 PPP1R14BQ96C90 147 aa12.68□□□□□ -0.38
COMMD4-209ENST00000564068 SPATA17Q96L03 361 aa12.68□□□□□ -0.38
COMMD4-209ENST00000564068 PPP1R2P1Q96PQ5 205 aa12.68□□□□□ -0.38
COMMD4-209ENST00000564068 VAT1Q99536 393 aa12.68□□□□□ -0.38
COMMD4-209ENST00000564068 PRKD2Q9BZL6 878 aa12.68□□□□□ -0.38
COMMD4-209ENST00000564068 PLK2Q9NYY3 685 aa12.68□□□□□ -0.38
COMMD4-209ENST00000564068 UBAP1Q9NZ09 502 aa12.68□□□□□ -0.38
COMMD4-209ENST00000564068 ZDHHC2Q9UIJ5 367 aa12.68□□□□□ -0.38
COMMD4-209ENST00000564068 RNASEH2AO75792 299 aaKnown RBP12.68□□□□□ -0.38
COMMD4-209ENST00000564068 B3GAT3O94766 335 aa12.68□□□□□ -0.38
COMMD4-209ENST00000564068 ETV4P43268 484 aa12.68□□□□□ -0.38
COMMD4-209ENST00000564068 MRPS5P82675 430 aaKnown RBP12.68□□□□□ -0.38
COMMD4-209ENST00000564068 LCLAT1Q6UWP7 414 aa12.68□□□□□ -0.38
COMMD4-209ENST00000564068 LDB1Q86U70 411 aaPredicted RBP12.68□□□□□ -0.38
COMMD4-209ENST00000564068 PLD6Q8N2A8 252 aaKnown RBP12.68□□□□□ -0.38
COMMD4-209ENST00000564068 ZNF540Q8NDQ6 660 aa12.68□□□□□ -0.38
COMMD4-209ENST00000564068 REPS2Q8NFH8 660 aa12.68□□□□□ -0.38
COMMD4-209ENST00000564068 OR9I1Q8NGQ6 314 aa12.68□□□□□ -0.38
COMMD4-209ENST00000564068 UBASH3BQ8TF42 649 aa12.68□□□□□ -0.38
COMMD4-209ENST00000564068 OTULINQ96BN8 352 aa12.68□□□□□ -0.38
COMMD4-209ENST00000564068 OMA1Q96E52 524 aa12.68□□□□□ -0.38
COMMD4-209ENST00000564068 ASIC4Q96FT7 647 aa12.68□□□□□ -0.38
COMMD4-209ENST00000564068 TWNKQ96RR1 684 aa12.68□□□□□ -0.38
COMMD4-209ENST00000564068 MRPL45Q9BRJ2 306 aaKnown RBP12.68□□□□□ -0.38
COMMD4-209ENST00000564068 TRIM54Q9BYV2 358 aa12.68□□□□□ -0.38
COMMD4-209ENST00000564068 VTA1Q9NP79 307 aa12.68□□□□□ -0.38
COMMD4-209ENST00000564068 C3orf18Q9UK00 162 aa12.68□□□□□ -0.38
COMMD4-209ENST00000564068 CLDN5O00501 218 aa12.67□□□□□ -0.38
COMMD4-209ENST00000564068 IDH3BO43837 385 aa12.67□□□□□ -0.38
COMMD4-209ENST00000564068 MAFO75444 373 aaPredicted RBP12.67□□□□□ -0.38
COMMD4-209ENST00000564068 PIRTP0C851 137 aa12.67□□□□□ -0.38
COMMD4-209ENST00000564068 RPS12P25398 132 aaKnown RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms