RNA–Protein interactions for RNA: ENST00000561276.5

LRRC28-221, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-221ENST00000561276 GBA3Q9H227 469 aa10.37□□□□□ -0.75
LRRC28-221ENST00000561276 ZSCAN32Q9NX65 697 aa10.37□□□□□ -0.75
LRRC28-221ENST00000561276 DKK3Q9UBP4 350 aa10.37□□□□□ -0.75
LRRC28-221ENST00000561276 FAM153AQ9UHL3 310 aa10.37□□□□□ -0.75
LRRC28-221ENST00000561276 FZD4Q9ULV1 537 aa10.37□□□□□ -0.75
LRRC28-221ENST00000561276 CYP8B1Q9UNU6 501 aa10.37□□□□□ -0.75
LRRC28-221ENST00000561276 CHKBQ9Y259 395 aa10.37□□□□□ -0.75
LRRC28-221ENST00000561276 PCDHB9Q9Y5E1 797 aa10.37□□□□□ -0.75
LRRC28-221ENST00000561276 RAI2Q9Y5P3 530 aa10.37□□□□□ -0.75
LRRC28-221ENST00000561276 THADAQ6YHU6 1953 aa10.37□□□□□ -0.75
LRRC28-221ENST00000561276 LRRK1Q38SD2 2015 aa10.36□□□□□ -0.75
LRRC28-221ENST00000561276 FANCMQ8IYD8 2048 aa10.36□□□□□ -0.75
LRRC28-221ENST00000561276 IGHV1OR15-9A0A0B4J2B8 117 aa10.36□□□□□ -0.75
LRRC28-221ENST00000561276 HRO43593 1189 aa10.36□□□□□ -0.75
LRRC28-221ENST00000561276 FZD6O60353 706 aa10.36□□□□□ -0.75
LRRC28-221ENST00000561276 SOCS5O75159 536 aa10.36□□□□□ -0.75
LRRC28-221ENST00000561276 PMPCBO75439 489 aa10.36□□□□□ -0.75
LRRC28-221ENST00000561276 ANXA9O76027 345 aa10.36□□□□□ -0.75
LRRC28-221ENST00000561276 PRLP01236 227 aa10.36□□□□□ -0.75
LRRC28-221ENST00000561276 KRT14P02533 472 aa10.36□□□□□ -0.75
LRRC28-221ENST00000561276 ADRB3P13945 408 aa10.36□□□□□ -0.75
LRRC28-221ENST00000561276 ITIH2P19823 946 aa10.36□□□□□ -0.75
LRRC28-221ENST00000561276 PSMB4P28070 264 aa10.36□□□□□ -0.75
LRRC28-221ENST00000561276 CD6P30203 668 aa10.36□□□□□ -0.75
LRRC28-221ENST00000561276 ACSL1P33121 698 aa10.36□□□□□ -0.75
LRRC28-221ENST00000561276 RPL22P35268 128 aaKnown RBP10.36□□□□□ -0.75
LRRC28-221ENST00000561276 NEK3P51956 506 aa10.36□□□□□ -0.75
LRRC28-221ENST00000561276 TAS2R38P59533 333 aa10.36□□□□□ -0.75
LRRC28-221ENST00000561276 CDK18Q07002 472 aa10.36□□□□□ -0.75
LRRC28-221ENST00000561276 PRPSAP1Q14558 356 aa10.36□□□□□ -0.75
LRRC28-221ENST00000561276 TRIP13Q15645 432 aaPredicted RBP10.36□□□□□ -0.75
LRRC28-221ENST00000561276 PIP5KL1Q5T9C9 394 aa10.36□□□□□ -0.75
LRRC28-221ENST00000561276 ARMC12Q5T9G4 340 aa10.36□□□□□ -0.75
LRRC28-221ENST00000561276 AGBL4Q5VU57 503 aa10.36□□□□□ -0.75
LRRC28-221ENST00000561276 BRAT1Q6PJG6 821 aa10.36□□□□□ -0.75
LRRC28-221ENST00000561276 C4orf22Q6V702 233 aa10.36□□□□□ -0.75
LRRC28-221ENST00000561276 PARS2Q7L3T8 475 aaKnown RBP10.36□□□□□ -0.75
LRRC28-221ENST00000561276 ZSWIM9Q86XI8 627 aa10.36□□□□□ -0.75
LRRC28-221ENST00000561276 TAB3Q8N5C8 712 aaPredicted RBP10.36□□□□□ -0.75
LRRC28-221ENST00000561276 ZBTB44Q8NCP5 570 aa10.36□□□□□ -0.75
LRRC28-221ENST00000561276 SPATA4Q8NEY3 305 aa10.36□□□□□ -0.75
LRRC28-221ENST00000561276 OR14C36Q8NHC7 312 aa10.36□□□□□ -0.75
LRRC28-221ENST00000561276 GRK7Q8WTQ7 553 aa10.36□□□□□ -0.75
LRRC28-221ENST00000561276 PIH1D2Q8WWB5 315 aa10.36□□□□□ -0.75
LRRC28-221ENST00000561276 ECHDC3Q96DC8 303 aa10.36□□□□□ -0.75
LRRC28-221ENST00000561276 OXNAD1Q96HP4 312 aaPredicted RBP10.36□□□□□ -0.75
LRRC28-221ENST00000561276 GORASP1Q9BQQ3 440 aa10.36□□□□□ -0.75
LRRC28-221ENST00000561276 TDRD1Q9BXT4 1180 aaKnown RBP10.36□□□□□ -0.75
LRRC28-221ENST00000561276 BTBD1Q9H0C5 482 aa10.36□□□□□ -0.75
LRRC28-221ENST00000561276 ETNK1Q9HBU6 452 aa10.36□□□□□ -0.75
LRRC28-221ENST00000561276 PCDH9Q9HC56 1237 aa10.36□□□□□ -0.75
LRRC28-221ENST00000561276 VPS45Q9NRW7 570 aa10.36□□□□□ -0.75
LRRC28-221ENST00000561276 WSB2Q9NYS7 404 aaPredicted RBP10.36□□□□□ -0.75
LRRC28-221ENST00000561276 PAK5Q9P286 719 aa10.36□□□□□ -0.75
LRRC28-221ENST00000561276 PCYOX1Q9UHG3 505 aa10.36□□□□□ -0.75
LRRC28-221ENST00000561276 PHTF1Q9UMS5 762 aa10.36□□□□□ -0.75
LRRC28-221ENST00000561276 AAR2Q9Y312 384 aaKnown RBP10.36□□□□□ -0.75
LRRC28-221ENST00000561276 ARIH1Q9Y4X5 557 aaPredicted RBP10.36□□□□□ -0.75
LRRC28-221ENST00000561276 DOCK9Q9BZ29 2069 aa10.36□□□□□ -0.75
LRRC28-221ENST00000561276 TBC1D3DA0A087WVF3 549 aa10.35□□□□□ -0.75
LRRC28-221ENST00000561276 TBC1D3IA0A087WXS9 549 aa10.35□□□□□ -0.75
LRRC28-221ENST00000561276 TBC1D3EA0A087X179 549 aa10.35□□□□□ -0.75
LRRC28-221ENST00000561276 TBC1D3KA0A087X1G2 549 aa10.35□□□□□ -0.75
LRRC28-221ENST00000561276 A0A1W2PQ67 120 aa10.35□□□□□ -0.75
LRRC28-221ENST00000561276 TSPAN11A1L157 253 aa10.35□□□□□ -0.75
LRRC28-221ENST00000561276 TBC1D3FA6NER0 549 aaPredicted RBP10.35□□□□□ -0.75
LRRC28-221ENST00000561276 FAM47DPA6NHR8 397 aa10.35□□□□□ -0.75
LRRC28-221ENST00000561276 A8MX80 341 aa10.35□□□□□ -0.75
LRRC28-221ENST00000561276 ANKRD66B4E2M5 251 aa10.35□□□□□ -0.75
LRRC28-221ENST00000561276 TBC1D3LB9A6J9 549 aa10.35□□□□□ -0.75
LRRC28-221ENST00000561276 PLRG1O43660 514 aaKnown RBP10.35□□□□□ -0.75
LRRC28-221ENST00000561276 NDUFS2O75306 463 aa10.35□□□□□ -0.75
LRRC28-221ENST00000561276 RPP40O75818 363 aaKnown RBP10.35□□□□□ -0.75
LRRC28-221ENST00000561276 PGLSO95336 258 aa10.35□□□□□ -0.75
LRRC28-221ENST00000561276 GAS8O95995 478 aa10.35□□□□□ -0.75
LRRC28-221ENST00000561276 TBC1D3HP0C7X1 549 aa10.35□□□□□ -0.75
LRRC28-221ENST00000561276 CA4P22748 312 aa10.35□□□□□ -0.75
LRRC28-221ENST00000561276 XPAP23025 273 aaPredicted RBP10.35□□□□□ -0.75
LRRC28-221ENST00000561276 CNR2P34972 360 aa10.35□□□□□ -0.75
LRRC28-221ENST00000561276 FNTAP49354 379 aa10.35□□□□□ -0.75
LRRC28-221ENST00000561276 GEMP55040 296 aa10.35□□□□□ -0.75
LRRC28-221ENST00000561276 WNT3AP56704 352 aa10.35□□□□□ -0.75
LRRC28-221ENST00000561276 FAM193AP78312 1265 aa10.35□□□□□ -0.75
LRRC28-221ENST00000561276 SRSF5Q13243 272 aaKnown RBP10.35□□□□□ -0.75
LRRC28-221ENST00000561276 MPP3Q13368 585 aa10.35□□□□□ -0.75
LRRC28-221ENST00000561276 SLC14A2Q15849 920 aa10.35□□□□□ -0.75
LRRC28-221ENST00000561276 WHAMMP3Q1A5X7 153 aa10.35□□□□□ -0.75
LRRC28-221ENST00000561276 LRRC73Q5JTD7 316 aa10.35□□□□□ -0.75
LRRC28-221ENST00000561276 DNTTIP2Q5QJE6 756 aaKnown RBP10.35□□□□□ -0.75
LRRC28-221ENST00000561276 FAXCQ5TGI0 409 aa10.35□□□□□ -0.75
LRRC28-221ENST00000561276 TBC1D3GQ6DHY5 549 aa10.35□□□□□ -0.75
LRRC28-221ENST00000561276 TBC1D3CQ6IPX1 549 aa10.35□□□□□ -0.75
LRRC28-221ENST00000561276 CCDC70Q6NSX1 233 aa10.35□□□□□ -0.75
LRRC28-221ENST00000561276 KDELC1Q6UW63 502 aa10.35□□□□□ -0.75
LRRC28-221ENST00000561276 ZNF572Q7Z3I7 529 aaPredicted RBP10.35□□□□□ -0.75
LRRC28-221ENST00000561276 TBC1D3Q8IZP1 549 aaPredicted RBP10.35□□□□□ -0.75
LRRC28-221ENST00000561276 DEFB119Q8N690 84 aa10.35□□□□□ -0.75
LRRC28-221ENST00000561276 PRSS33Q8NF86 280 aa10.35□□□□□ -0.75
LRRC28-221ENST00000561276 GAB3Q8WWW8 586 aa10.35□□□□□ -0.75
LRRC28-221ENST00000561276 RAB7BQ96AH8 199 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms