RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 GPRC5DQ9NZD1 345 aa16.62■□□□□ 0.25
TPM1-228ENST00000560975 PKD2L2Q9NZM6 624 aa16.62■□□□□ 0.25
TPM1-228ENST00000560975 ITGB1BP2Q9UKP3 347 aa16.62■□□□□ 0.25
TPM1-228ENST00000560975 ZNF487B1APH4 448 aa16.61■□□□□ 0.25
TPM1-228ENST00000560975 ACKR2O00590 384 aa16.61■□□□□ 0.25
TPM1-228ENST00000560975 AHSGP02765 367 aa16.61■□□□□ 0.25
TPM1-228ENST00000560975 PSMA4P25789 261 aaKnown RBP16.61■□□□□ 0.25
TPM1-228ENST00000560975 ADORA2BP29275 332 aa16.61■□□□□ 0.25
TPM1-228ENST00000560975 CHRNA5P30532 468 aa16.61■□□□□ 0.25
TPM1-228ENST00000560975 OPRL1P41146 370 aa16.61■□□□□ 0.25
TPM1-228ENST00000560975 GLUD2P49448 558 aa16.61■□□□□ 0.25
TPM1-228ENST00000560975 PITX1P78337 314 aaPredicted RBP16.61■□□□□ 0.25
TPM1-228ENST00000560975 IER5Q5VY09 327 aa16.61■□□□□ 0.25
TPM1-228ENST00000560975 PACRGLQ8N7B6 248 aa16.61■□□□□ 0.25
TPM1-228ENST00000560975 ZC3H15Q8WU90 426 aaKnown RBP16.61■□□□□ 0.25
TPM1-228ENST00000560975 VPS51Q9UID3 782 aa16.61■□□□□ 0.25
TPM1-228ENST00000560975 TRIM64A6NGJ6 449 aa16.61■□□□□ 0.25
TPM1-228ENST00000560975 NR5A2O00482 541 aa16.61■□□□□ 0.25
TPM1-228ENST00000560975 ZBTB24O43167 697 aaPredicted RBP16.61■□□□□ 0.25
TPM1-228ENST00000560975 CLPXO76031 633 aa16.61■□□□□ 0.25
TPM1-228ENST00000560975 AP2A1O95782 977 aa16.61■□□□□ 0.25
TPM1-228ENST00000560975 IDUAP35475 653 aa16.61■□□□□ 0.25
TPM1-228ENST00000560975 CAPGP40121 348 aa16.61■□□□□ 0.25
TPM1-228ENST00000560975 GJA9P57773 515 aa16.61■□□□□ 0.25
TPM1-228ENST00000560975 RPS3AP61247 264 aaKnown RBP16.61■□□□□ 0.25
TPM1-228ENST00000560975 INPP5AQ14642 412 aa16.61■□□□□ 0.25
TPM1-228ENST00000560975 ATP6AP1Q15904 470 aa16.61■□□□□ 0.25
TPM1-228ENST00000560975 AMHR2Q16671 573 aa16.61■□□□□ 0.25
TPM1-228ENST00000560975 CLEC6AQ6EIG7 209 aa16.61■□□□□ 0.25
TPM1-228ENST00000560975 PIWIL3Q7Z3Z3 882 aaKnown RBP16.61■□□□□ 0.25
TPM1-228ENST00000560975 RNF139Q8WU17 664 aa16.61■□□□□ 0.25
TPM1-228ENST00000560975 SLC35F5Q8WV83 523 aa16.61■□□□□ 0.25
TPM1-228ENST00000560975 SNX19Q92543 992 aa16.61■□□□□ 0.25
TPM1-228ENST00000560975 HERC2P3Q9BVR0 1158 aa16.61■□□□□ 0.25
TPM1-228ENST00000560975 SLC30A1Q9Y6M5 507 aa16.61■□□□□ 0.25
TPM1-228ENST00000560975 KPNA4O00629 521 aaPredicted RBP16.6■□□□□ 0.25
TPM1-228ENST00000560975 LSM1O15116 133 aaKnown RBP16.6■□□□□ 0.25
TPM1-228ENST00000560975 IQCF3P0C7M6 154 aa16.6■□□□□ 0.25
TPM1-228ENST00000560975 MTHFD1P11586 935 aaKnown RBP16.6■□□□□ 0.25
TPM1-228ENST00000560975 UBA1P22314 1058 aaKnown RBP16.6■□□□□ 0.25
TPM1-228ENST00000560975 KCNA5P22460 613 aa16.6■□□□□ 0.25
TPM1-228ENST00000560975 PTPN3P26045 913 aa16.6■□□□□ 0.25
TPM1-228ENST00000560975 EEF1DP29692 281 aaKnown RBP16.6■□□□□ 0.25
TPM1-228ENST00000560975 PTPN9P43378 593 aa16.6■□□□□ 0.25
TPM1-228ENST00000560975 NANOGNBQ7Z5D8 188 aa16.6■□□□□ 0.25
TPM1-228ENST00000560975 FAM149B1Q96BN6 582 aa16.6■□□□□ 0.25
TPM1-228ENST00000560975 ADAMTS10Q9H324 1103 aa16.6■□□□□ 0.25
TPM1-228ENST00000560975 RHOJQ9H4E5 214 aa16.6■□□□□ 0.25
TPM1-228ENST00000560975 PALMDQ9NP74 551 aa16.6■□□□□ 0.25
TPM1-228ENST00000560975 TBC1D13Q9NVG8 400 aa16.6■□□□□ 0.25
TPM1-228ENST00000560975 CPQQ9Y646 472 aa16.6■□□□□ 0.25
TPM1-228ENST00000560975 TANC1Q9C0D5 1861 aa16.6■□□□□ 0.25
TPM1-228ENST00000560975 ACOX3O15254 700 aa16.6■□□□□ 0.25
TPM1-228ENST00000560975 INPP4BO15327 924 aa16.6■□□□□ 0.25
TPM1-228ENST00000560975 CHRM3P20309 590 aa16.6■□□□□ 0.25
TPM1-228ENST00000560975 RCVRNP35243 200 aa16.6■□□□□ 0.25
TPM1-228ENST00000560975 STXBP2Q15833 593 aa16.6■□□□□ 0.25
TPM1-228ENST00000560975 KIF19Q2TAC6 998 aa16.6■□□□□ 0.25
TPM1-228ENST00000560975 CYBRD1Q53TN4 286 aa16.6■□□□□ 0.25
TPM1-228ENST00000560975 ERO1BQ86YB8 467 aa16.6■□□□□ 0.25
TPM1-228ENST00000560975 MFSD6LQ8IWD5 586 aa16.6■□□□□ 0.25
TPM1-228ENST00000560975 OR13F1Q8NGS4 319 aa16.6■□□□□ 0.25
TPM1-228ENST00000560975 SGCDQ92629 289 aa16.6■□□□□ 0.25
TPM1-228ENST00000560975 PHF21BQ96EK2 531 aa16.6■□□□□ 0.25
TPM1-228ENST00000560975 CENPNQ96H22 339 aaPredicted RBP16.6■□□□□ 0.25
TPM1-228ENST00000560975 SLC45A3Q96JT2 553 aa16.6■□□□□ 0.25
TPM1-228ENST00000560975 CSF3RQ99062 836 aa16.6■□□□□ 0.25
TPM1-228ENST00000560975 KLHL25Q9H0H3 589 aa16.6■□□□□ 0.25
TPM1-228ENST00000560975 CHST12Q9NRB3 414 aa16.6■□□□□ 0.25
TPM1-228ENST00000560975 GIMAP2Q9UG22 337 aa16.6■□□□□ 0.25
TPM1-228ENST00000560975 ZNF638Q14966 1978 aaKnown RBP16.6■□□□□ 0.25
TPM1-228ENST00000560975 CCT8P50990 548 aa16.6■□□□□ 0.25
TPM1-228ENST00000560975 RAD23AP54725 363 aa16.6■□□□□ 0.25
TPM1-228ENST00000560975 INCA1Q0VD86 236 aa16.6■□□□□ 0.25
TPM1-228ENST00000560975 FAM45BPQ6NSW5 357 aa16.6■□□□□ 0.25
TPM1-228ENST00000560975 CADM3Q8N126 398 aa16.6■□□□□ 0.25
TPM1-228ENST00000560975 FAM45AQ8TCE6 357 aa16.6■□□□□ 0.25
TPM1-228ENST00000560975 HEXDCQ8WVB3 486 aa16.6■□□□□ 0.25
TPM1-228ENST00000560975 GPR78Q96P69 363 aa16.6■□□□□ 0.25
TPM1-228ENST00000560975 MLPHQ9BV36 600 aaPredicted RBP16.6■□□□□ 0.25
TPM1-228ENST00000560975 SEZ6LQ9BYH1 1024 aa16.6■□□□□ 0.25
TPM1-228ENST00000560975 VRTNQ9H8Y1 702 aa16.6■□□□□ 0.25
TPM1-228ENST00000560975 SPON1Q9HCB6 807 aa16.6■□□□□ 0.25
TPM1-228ENST00000560975 CASS4Q9NQ75 786 aa16.6■□□□□ 0.25
TPM1-228ENST00000560975 SMPD3Q9NY59 655 aaPredicted RBP16.6■□□□□ 0.25
TPM1-228ENST00000560975 WARS2Q9UGM6 360 aaKnown RBP16.6■□□□□ 0.25
TPM1-228ENST00000560975 GIT1Q9Y2X7 761 aa16.6■□□□□ 0.25
TPM1-228ENST00000560975 ANK1P16157 1881 aa16.59■□□□□ 0.25
TPM1-228ENST00000560975 A8MU76 341 aa16.59■□□□□ 0.25
TPM1-228ENST00000560975 TOR1BO14657 336 aa16.59■□□□□ 0.25
TPM1-228ENST00000560975 NPHS1O60500 1241 aa16.59■□□□□ 0.25
TPM1-228ENST00000560975 SYNCRIPO60506 623 aaKnown RBP16.59■□□□□ 0.25
TPM1-228ENST00000560975 RASAL1O95294 804 aa16.59■□□□□ 0.25
TPM1-228ENST00000560975 NCK1P16333 377 aa16.59■□□□□ 0.25
TPM1-228ENST00000560975 SULT1E1P49888 294 aa16.59■□□□□ 0.25
TPM1-228ENST00000560975 CLCN3P51790 818 aa16.59■□□□□ 0.25
TPM1-228ENST00000560975 MXD4Q14582 209 aaPredicted RBP16.59■□□□□ 0.25
TPM1-228ENST00000560975 BCL2A1Q16548 175 aa16.59■□□□□ 0.25
TPM1-228ENST00000560975 CYP51A1Q16850 503 aa16.59■□□□□ 0.25
TPM1-228ENST00000560975 VPS26BQ4G0F5 336 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms