RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 ALPPL2P10696 532 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 CDK4P11802 303 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 CD59P13987 128 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 CCNB1P14635 433 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 COMTP21964 271 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 KDELR1P24390 212 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 IL4RP24394 825 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 CCNCP24863 283 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 HTR1BP28222 390 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 RXRGP48443 463 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 NR2C2P49116 596 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 BLKP51451 505 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 THOP1P52888 689 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 EPHB1P54762 984 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 HADHBP55084 474 aaKnown RBP4.41□□□□□ -1.7
SNX1-205ENST00000559339 GSDMDP57764 484 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 NXPH1P58417 271 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 HNRNPKP61978 463 aaKnown RBP eCLIP4.41□□□□□ -1.7
SNX1-205ENST00000559339 SLC10A7Q0GE19 358 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 GALNT2Q10471 571 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 KIF5AQ12840 1032 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 CAMK2BQ13554 666 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 PDE1CQ14123 709 aaPredicted RBP4.41□□□□□ -1.7
SNX1-205ENST00000559339 TFDP2Q14188 446 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 LRRC14Q15048 493 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 PAFAH1B3Q15102 231 aaKnown RBP4.41□□□□□ -1.7
SNX1-205ENST00000559339 PDK1Q15118 436 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 TCEAL1Q15170 157 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 ATP13A4Q4VNC1 1196 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 TMEM259Q4ZIN3 620 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 TFDP3Q5H9I0 405 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 ARMC12Q5T9G4 340 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 N4BP2L1Q5TBK1 243 aaPredicted RBP4.41□□□□□ -1.7
SNX1-205ENST00000559339 CCDC181Q5TID7 509 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 NCBP2-AS2Q69YL0 99 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 DBX2Q6ZNG2 339 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 ARHGAP36Q6ZRI8 547 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 Q6ZSR6 202 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 USP45Q70EL2 814 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 PTAR1Q7Z6K3 402 aaPredicted RBP4.41□□□□□ -1.7
SNX1-205ENST00000559339 PIP4P1Q86T03 277 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 KIAA1328Q86T90 577 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 PARGQ86W56 976 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 GAS2L3Q86XJ1 694 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 RFX6Q8HWS3 928 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 CAMK1DQ8IU85 385 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 CCDC50Q8IVM0 306 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 ARHGAP12Q8IWW6 846 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 RCOR2Q8IZ40 523 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 TMEM145Q8NBT3 493 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 NETO2Q8NC67 525 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 DENND6BQ8NEG7 585 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 ATL2Q8NHH9 583 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 TPCN2Q8NHX9 752 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 PCDH19Q8TAB3 1148 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 FAM71BQ8TC56 605 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 ASB12Q8WXK4 309 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 RAPGEF5Q92565 580 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 TSC1Q92574 1164 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 P3H4Q92791 437 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 KLK6Q92876 244 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 IFT43Q96FT9 208 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 RBM41Q96IZ5 413 aaKnown RBP4.41□□□□□ -1.7
SNX1-205ENST00000559339 RNF157Q96PX1 679 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 NUDCD1Q96RS6 583 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 MYOCQ99972 504 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 MGME1Q9BQP7 344 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 ORAI3Q9BRQ5 295 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 WRAP53Q9BUR4 548 aaKnown RBP4.41□□□□□ -1.7
SNX1-205ENST00000559339 DUSP23Q9BVJ7 150 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 C1QTNF2Q9BXJ5 285 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 BRD8Q9H0E9 1235 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 IL21RQ9HBE5 538 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 PCDH12Q9NPG4 1184 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 ETNK2Q9NVF9 386 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 EVA1BQ9NVM1 165 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 KLHL11Q9NVR0 708 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 RBM22Q9NW64 420 aaKnown RBP eCLIP4.41□□□□□ -1.7
SNX1-205ENST00000559339 KCTD5Q9NXV2 234 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 LHX3Q9UBR4 397 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 FTSJ1Q9UET6 329 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 AMACRQ9UHK6 382 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 ANGPTL2Q9UKU9 493 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 PCOLCE2Q9UKZ9 415 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 DNPEPQ9ULA0 475 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 ZFR2Q9UPR6 939 aaKnown RBP4.41□□□□□ -1.7
SNX1-205ENST00000559339 APOBEC2Q9Y235 224 aaKnown RBP4.41□□□□□ -1.7
SNX1-205ENST00000559339 ATP8A1Q9Y2Q0 1164 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 TTLL3Q9Y4R7 772 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 HEY1Q9Y5J3 304 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 ALG6Q9Y672 507 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 SLCO1B1Q9Y6L6 691 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 RALGAPA1Q6GYQ0 2036 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 KNL1Q8NG31 2342 aa4.4□□□□□ -1.7
SNX1-205ENST00000559339 MUC22E2RYF6 1773 aaPredicted RBP4.4□□□□□ -1.7
SNX1-205ENST00000559339 EML5Q05BV3 1969 aa4.4□□□□□ -1.7
SNX1-205ENST00000559339 SPTY2D1-AS1A0A0U1RR47 76 aa4.4□□□□□ -1.71
SNX1-205ENST00000559339 SPAARA0A1B0GVQ0 90 aa4.4□□□□□ -1.71
SNX1-205ENST00000559339 A0A1W2PR77 199 aa4.4□□□□□ -1.71
SNX1-205ENST00000559339 MED19A0JLT2 244 aaPredicted RBP4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms