RNA–Protein interactions for RNA: ENST00000559151.1

CASC4-208, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 883 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-208ENST00000559151 NIPAL4Q0D2K0 466 aa11.51□□□□□ -0.57
CASC4-208ENST00000559151 PIK3CD-AS1Q5SR53 167 aa11.51□□□□□ -0.57
CASC4-208ENST00000559151 KRBA2Q6ZNG9 492 aa11.51□□□□□ -0.57
CASC4-208ENST00000559151 CHST9Q7L1S5 443 aa11.51□□□□□ -0.57
CASC4-208ENST00000559151 ZDHHC23Q8IYP9 409 aa11.51□□□□□ -0.57
CASC4-208ENST00000559151 MCPH1Q8NEM0 835 aa11.51□□□□□ -0.57
CASC4-208ENST00000559151 GJC3Q8NFK1 279 aa11.51□□□□□ -0.57
CASC4-208ENST00000559151 MXRA8Q9BRK3 442 aa11.51□□□□□ -0.57
CASC4-208ENST00000559151 B3GNT4Q9C0J1 378 aa11.51□□□□□ -0.57
CASC4-208ENST00000559151 TKTL2Q9H0I9 626 aa11.51□□□□□ -0.57
CASC4-208ENST00000559151 DLGAP2Q9P1A6 1054 aa11.51□□□□□ -0.57
CASC4-208ENST00000559151 TMEM5Q9Y2B1 443 aa11.51□□□□□ -0.57
CASC4-208ENST00000559151 WDR33Q9C0J8 1336 aaKnown RBP11.51□□□□□ -0.57
CASC4-208ENST00000559151 A0A1W2PPC1 479 aa11.5□□□□□ -0.57
CASC4-208ENST00000559151 A6NNC1 897 aa11.5□□□□□ -0.57
CASC4-208ENST00000559151 TCERG1O14776 1098 aaKnown RBP11.5□□□□□ -0.57
CASC4-208ENST00000559151 HOXD9P28356 352 aaPredicted RBP11.5□□□□□ -0.57
CASC4-208ENST00000559151 EPHB2P29323 1055 aa11.5□□□□□ -0.57
CASC4-208ENST00000559151 CDH8P55286 799 aa11.5□□□□□ -0.57
CASC4-208ENST00000559151 PRAMEP78395 509 aa11.5□□□□□ -0.57
CASC4-208ENST00000559151 CAPSQ13938 189 aa11.5□□□□□ -0.57
CASC4-208ENST00000559151 IRF3Q14653 427 aa11.5□□□□□ -0.57
CASC4-208ENST00000559151 DAZAP2Q15038 168 aaPredicted RBP11.5□□□□□ -0.57
CASC4-208ENST00000559151 SARM1Q6SZW1 724 aa11.5□□□□□ -0.57
CASC4-208ENST00000559151 GPSM1Q86YR5 675 aa11.5□□□□□ -0.57
CASC4-208ENST00000559151 FAM217AQ8IXS0 508 aa11.5□□□□□ -0.57
CASC4-208ENST00000559151 ADGRF2Q8IZF7 708 aa11.5□□□□□ -0.57
CASC4-208ENST00000559151 KDM1BQ8NB78 822 aa11.5□□□□□ -0.57
CASC4-208ENST00000559151 RPS6KA6Q9UK32 745 aa11.5□□□□□ -0.57
CASC4-208ENST00000559151 AAR2Q9Y312 384 aaKnown RBP11.5□□□□□ -0.57
CASC4-208ENST00000559151 LSM4Q9Y4Z0 139 aaKnown RBP11.5□□□□□ -0.57
CASC4-208ENST00000559151 SNX8Q9Y5X2 465 aa11.5□□□□□ -0.57
CASC4-208ENST00000559151 SLC4A4Q9Y6R1 1079 aa11.5□□□□□ -0.57
CASC4-208ENST00000559151 A8MZ25 164 aa11.49□□□□□ -0.57
CASC4-208ENST00000559151 ADAM10O14672 748 aa11.49□□□□□ -0.57
CASC4-208ENST00000559151 IPO7O95373 1038 aaKnown RBP11.49□□□□□ -0.57
CASC4-208ENST00000559151 CLDN7O95471 211 aa11.49□□□□□ -0.57
CASC4-208ENST00000559151 HOXB5P09067 269 aa11.49□□□□□ -0.57
CASC4-208ENST00000559151 CLTBP09497 229 aa11.49□□□□□ -0.57
CASC4-208ENST00000559151 CHRNB1P11230 501 aa11.49□□□□□ -0.57
CASC4-208ENST00000559151 IL7RP16871 459 aa11.49□□□□□ -0.57
CASC4-208ENST00000559151 SUPT20HL1Q3ZLR7 823 aa11.49□□□□□ -0.57
CASC4-208ENST00000559151 MFSD4BQ5TF39 518 aa11.49□□□□□ -0.57
CASC4-208ENST00000559151 TMEM71Q6P5X7 295 aa11.49□□□□□ -0.57
CASC4-208ENST00000559151 LCTLQ6UWM7 567 aa11.49□□□□□ -0.57
CASC4-208ENST00000559151 TAGAPQ8N103 731 aa11.49□□□□□ -0.57
CASC4-208ENST00000559151 CNOT8Q9UFF9 292 aaKnown RBP11.49□□□□□ -0.57
CASC4-208ENST00000559151 GCH1P30793 250 aa11.48□□□□□ -0.57
CASC4-208ENST00000559151 IRX6P78412 446 aaPredicted RBP11.48□□□□□ -0.57
CASC4-208ENST00000559151 EPS8Q12929 822 aa11.48□□□□□ -0.57
CASC4-208ENST00000559151 OLIG2Q13516 323 aa11.48□□□□□ -0.57
CASC4-208ENST00000559151 CXorf66Q5JRM2 361 aaPredicted RBP11.48□□□□□ -0.57
CASC4-208ENST00000559151 TMCO3Q6UWJ1 677 aa11.48□□□□□ -0.57
CASC4-208ENST00000559151 ADGRG3Q86Y34 549 aa11.48□□□□□ -0.57
CASC4-208ENST00000559151 KRTAP1-3Q8IUG1 177 aa11.48□□□□□ -0.57
CASC4-208ENST00000559151 ZCCHC9Q8N567 271 aaKnown RBP11.48□□□□□ -0.57
CASC4-208ENST00000559151 NELL1Q92832 810 aa11.48□□□□□ -0.57
CASC4-208ENST00000559151 NDRG3Q9UGV2 375 aa11.48□□□□□ -0.57
CASC4-208ENST00000559151 A3GALT2U3KPV4 340 aa11.48□□□□□ -0.57
CASC4-208ENST00000559151 A0A0U1RQF3 1178 aa11.47□□□□□ -0.57
CASC4-208ENST00000559151 A0A1W2PQ09 198 aa11.47□□□□□ -0.57
CASC4-208ENST00000559151 PGM3O95394 542 aa11.47□□□□□ -0.57
CASC4-208ENST00000559151 BECN1Q14457 450 aa11.47□□□□□ -0.57
CASC4-208ENST00000559151 PLEKHO1Q53GL0 409 aaPredicted RBP11.47□□□□□ -0.57
CASC4-208ENST00000559151 PRAMEF19Q5SWL8 479 aa11.47□□□□□ -0.57
CASC4-208ENST00000559151 SLC18B1Q6NT16 456 aa11.47□□□□□ -0.57
CASC4-208ENST00000559151 SLC44A5Q8NCS7 719 aa11.47□□□□□ -0.57
CASC4-208ENST00000559151 CEP76Q8TAP6 659 aa11.47□□□□□ -0.57
CASC4-208ENST00000559151 DDB2Q92466 427 aa11.47□□□□□ -0.57
CASC4-208ENST00000559151 MAK16Q9BXY0 300 aaKnown RBP11.47□□□□□ -0.57
CASC4-208ENST00000559151 FLRT1Q9NZU1 646 aa11.47□□□□□ -0.57
CASC4-208ENST00000559151 MSRB1Q9NZV6 116 aa11.47□□□□□ -0.57
CASC4-208ENST00000559151 TTBK1Q5TCY1 1321 aaPredicted RBP11.46□□□□□ -0.57
CASC4-208ENST00000559151 FAM90A8PA6NJQ4 464 aa11.46□□□□□ -0.57
CASC4-208ENST00000559151 KLK8O60259 260 aa11.46□□□□□ -0.57
CASC4-208ENST00000559151 ZNF500O60304 480 aaPredicted RBP11.46□□□□□ -0.57
CASC4-208ENST00000559151 FAM90A13PP0C7W8 464 aa11.46□□□□□ -0.57
CASC4-208ENST00000559151 FAM90A24PP0C7X0 464 aa11.46□□□□□ -0.57
CASC4-208ENST00000559151 SHMT1P34896 483 aa11.46□□□□□ -0.57
CASC4-208ENST00000559151 ESCO2Q56NI9 601 aa11.46□□□□□ -0.57
CASC4-208ENST00000559151 DEF8Q6ZN54 512 aa11.46□□□□□ -0.57
CASC4-208ENST00000559151 YTHDF3Q7Z739 585 aaKnown RBP11.46□□□□□ -0.57
CASC4-208ENST00000559151 DENND6AQ8IWF6 608 aa11.46□□□□□ -0.57
CASC4-208ENST00000559151 ZKSCAN4Q969J2 545 aaPredicted RBP11.46□□□□□ -0.57
CASC4-208ENST00000559151 FEM1CQ96JP0 617 aa11.46□□□□□ -0.57
CASC4-208ENST00000559151 CDT1Q9H211 546 aa11.46□□□□□ -0.57
CASC4-208ENST00000559151 BPIFA1Q9NP55 256 aa11.46□□□□□ -0.57
CASC4-208ENST00000559151 COX11Q9Y6N1 276 aa11.46□□□□□ -0.57
CASC4-208ENST00000559151 P4HA2O15460 535 aa11.45□□□□□ -0.58
CASC4-208ENST00000559151 TLX3O43711 291 aaPredicted RBP11.45□□□□□ -0.58
CASC4-208ENST00000559151 BEST1O76090 585 aa11.45□□□□□ -0.58
CASC4-208ENST00000559151 NKX2-2O95096 273 aa11.45□□□□□ -0.58
CASC4-208ENST00000559151 CYP19A1P11511 503 aaPredicted RBP11.45□□□□□ -0.58
CASC4-208ENST00000559151 STK4Q13043 487 aa11.45□□□□□ -0.58
CASC4-208ENST00000559151 DRAP1Q14919 205 aaPredicted RBP11.45□□□□□ -0.58
CASC4-208ENST00000559151 TCTN1Q2MV58 587 aa11.45□□□□□ -0.58
CASC4-208ENST00000559151 PLEKHS1Q5SXH7 462 aa11.45□□□□□ -0.58
CASC4-208ENST00000559151 HIST2H2BCQ6DN03 193 aa11.45□□□□□ -0.58
CASC4-208ENST00000559151 HIST2H2BDQ6DRA6 164 aa11.45□□□□□ -0.58
CASC4-208ENST00000559151 FBXO46Q6PJ61 603 aaPredicted RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms