RNA–Protein interactions for RNA: ENST00000556790.1

LGMN-213, Transcript of legumain, humanhuman

TSL 2

Gene LGMN, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGMN-213ENST00000556790 PCDHGC4Q9Y5F7 938 aa6.41□□□□□ -1.38
LGMN-213ENST00000556790 BSNQ9UPA5 3926 aa6.4□□□□□ -1.38
LGMN-213ENST00000556790 SPENQ96T58 3664 aaKnown RBP6.4□□□□□ -1.38
LGMN-213ENST00000556790 SPTY2D1-AS1A0A0U1RR47 76 aa6.4□□□□□ -1.38
LGMN-213ENST00000556790 A0A1W2PNU3 283 aaPredicted RBP6.4□□□□□ -1.38
LGMN-213ENST00000556790 CPED1A4D0V7 1026 aa6.4□□□□□ -1.38
LGMN-213ENST00000556790 ANKRD62A6NC57 917 aa6.4□□□□□ -1.38
LGMN-213ENST00000556790 A6NNZ2 444 aa6.4□□□□□ -1.38
LGMN-213ENST00000556790 FPGTO14772 594 aa6.4□□□□□ -1.38
LGMN-213ENST00000556790 PRPSAP2O60256 369 aa6.4□□□□□ -1.38
LGMN-213ENST00000556790 PALMO75781 387 aa6.4□□□□□ -1.38
LGMN-213ENST00000556790 PEX11BO96011 259 aa6.4□□□□□ -1.38
LGMN-213ENST00000556790 KRT10P13645 584 aa6.4□□□□□ -1.38
LGMN-213ENST00000556790 C6P13671 934 aa6.4□□□□□ -1.38
LGMN-213ENST00000556790 JUPP14923 745 aa6.4□□□□□ -1.38
LGMN-213ENST00000556790 JUNDP17535 347 aa6.4□□□□□ -1.38
LGMN-213ENST00000556790 CTPS1P17812 591 aa6.4□□□□□ -1.38
LGMN-213ENST00000556790 TGM2P21980 687 aa6.4□□□□□ -1.38
LGMN-213ENST00000556790 EIF4A3P38919 411 aaKnown RBP6.4□□□□□ -1.38
LGMN-213ENST00000556790 EIF2S3P41091 472 aaKnown RBP6.4□□□□□ -1.38
LGMN-213ENST00000556790 LIG3P49916 1009 aa6.4□□□□□ -1.38
LGMN-213ENST00000556790 SCNN1BP51168 640 aa6.4□□□□□ -1.38
LGMN-213ENST00000556790 ADKP55263 362 aaKnown RBP6.4□□□□□ -1.38
LGMN-213ENST00000556790 PFN3P60673 137 aa6.4□□□□□ -1.38
LGMN-213ENST00000556790 DAB2P98082 770 aa6.4□□□□□ -1.38
LGMN-213ENST00000556790 SLC25A11Q02978 314 aaKnown RBP6.4□□□□□ -1.38
LGMN-213ENST00000556790 SLC20A2Q08357 652 aa6.4□□□□□ -1.38
LGMN-213ENST00000556790 RALGDSQ12967 914 aa6.4□□□□□ -1.38
LGMN-213ENST00000556790 SGCGQ13326 291 aa6.4□□□□□ -1.38
LGMN-213ENST00000556790 MTA1Q13330 715 aa6.4□□□□□ -1.38
LGMN-213ENST00000556790 HNRNPDQ14103 355 aaKnown RBP6.4□□□□□ -1.38
LGMN-213ENST00000556790 DPYSQ14117 519 aa6.4□□□□□ -1.38
LGMN-213ENST00000556790 INPP5AQ14642 412 aa6.4□□□□□ -1.38
LGMN-213ENST00000556790 WSCD2Q2TBF2 565 aa6.4□□□□□ -1.38
LGMN-213ENST00000556790 CCDC122Q5T0U0 273 aa6.4□□□□□ -1.38
LGMN-213ENST00000556790 AFMIDQ63HM1 303 aa6.4□□□□□ -1.38
LGMN-213ENST00000556790 KIAA1161Q6NSJ0 714 aa6.4□□□□□ -1.38
LGMN-213ENST00000556790 KYAT3Q6YP21 454 aaKnown RBP6.4□□□□□ -1.38
LGMN-213ENST00000556790 SRLQ86TD4 932 aa6.4□□□□□ -1.38
LGMN-213ENST00000556790 CCL4L1Q8NHW4 92 aa6.4□□□□□ -1.38
LGMN-213ENST00000556790 CXorf40AQ8TE69 158 aa6.4□□□□□ -1.38
LGMN-213ENST00000556790 FNIP1Q8TF40 1166 aa6.4□□□□□ -1.38
LGMN-213ENST00000556790 PDCD6IPQ8WUM4 868 aaKnown RBP6.4□□□□□ -1.38
LGMN-213ENST00000556790 ISG20Q96AZ6 181 aaKnown RBP6.4□□□□□ -1.38
LGMN-213ENST00000556790 SKA1Q96BD8 255 aa6.4□□□□□ -1.38
LGMN-213ENST00000556790 CENPTQ96BT3 561 aa6.4□□□□□ -1.38
LGMN-213ENST00000556790 LRIG1Q96JA1 1093 aa6.4□□□□□ -1.38
LGMN-213ENST00000556790 BBC3Q96PG8 261 aaPredicted RBP6.4□□□□□ -1.38
LGMN-213ENST00000556790 CSPG4P5Q96PW8 444 aa6.4□□□□□ -1.38
LGMN-213ENST00000556790 CHP1Q99653 195 aa6.4□□□□□ -1.38
LGMN-213ENST00000556790 LRRC61Q9BV99 259 aa6.4□□□□□ -1.38
LGMN-213ENST00000556790 LGR4Q9BXB1 951 aa6.4□□□□□ -1.38
LGMN-213ENST00000556790 CEP41Q9BYV8 373 aa6.4□□□□□ -1.38
LGMN-213ENST00000556790 BRD8Q9H0E9 1235 aa6.4□□□□□ -1.38
LGMN-213ENST00000556790 ISCUQ9H1K1 167 aa6.4□□□□□ -1.38
LGMN-213ENST00000556790 SUV39H2Q9H5I1 410 aa6.4□□□□□ -1.38
LGMN-213ENST00000556790 CATSPERBQ9H7T0 1116 aa6.4□□□□□ -1.38
LGMN-213ENST00000556790 SYNDIG1Q9H7V2 258 aa6.4□□□□□ -1.38
LGMN-213ENST00000556790 ERVMER34-1Q9H9K5 563 aa6.4□□□□□ -1.38
LGMN-213ENST00000556790 SP110Q9HB58 689 aa6.4□□□□□ -1.38
LGMN-213ENST00000556790 PCDH18Q9HCL0 1135 aa6.4□□□□□ -1.38
LGMN-213ENST00000556790 GPR27Q9NS67 375 aa6.4□□□□□ -1.38
LGMN-213ENST00000556790 SPTLC3Q9NUV7 552 aa6.4□□□□□ -1.38
LGMN-213ENST00000556790 IPO11Q9UI26 975 aaKnown RBP6.4□□□□□ -1.38
LGMN-213ENST00000556790 CD84Q9UIB8 345 aa6.4□□□□□ -1.38
LGMN-213ENST00000556790 RABGEF1Q9UJ41 708 aa6.4□□□□□ -1.38
LGMN-213ENST00000556790 ANAPC7Q9UJX3 599 aa6.4□□□□□ -1.38
LGMN-213ENST00000556790 LHX6Q9UPM6 363 aa6.4□□□□□ -1.38
LGMN-213ENST00000556790 DAAM1Q9Y4D1 1078 aa6.4□□□□□ -1.38
LGMN-213ENST00000556790 CACNA1GO43497 2377 aa6.4□□□□□ -1.39
LGMN-213ENST00000556790 URB1O60287 2271 aaKnown RBP6.39□□□□□ -1.39
LGMN-213ENST00000556790 FAM208BQ5VWN6 2430 aa6.39□□□□□ -1.39
LGMN-213ENST00000556790 TMEM202A6NGA9 273 aa6.39□□□□□ -1.39
LGMN-213ENST00000556790 RIOK3O14730 519 aaKnown RBP6.39□□□□□ -1.39
LGMN-213ENST00000556790 FGF10O15520 208 aaPredicted RBP6.39□□□□□ -1.39
LGMN-213ENST00000556790 AP1G1O43747 822 aa6.39□□□□□ -1.39
LGMN-213ENST00000556790 MFSD11O43934 449 aa6.39□□□□□ -1.39
LGMN-213ENST00000556790 TM7SF2O76062 418 aa6.39□□□□□ -1.39
LGMN-213ENST00000556790 RNF8O76064 485 aa6.39□□□□□ -1.39
LGMN-213ENST00000556790 CSF2P04141 144 aa6.39□□□□□ -1.39
LGMN-213ENST00000556790 SERPING1P05155 500 aa6.39□□□□□ -1.39
LGMN-213ENST00000556790 MPOP05164 745 aa6.39□□□□□ -1.39
LGMN-213ENST00000556790 ALPIP09923 528 aa6.39□□□□□ -1.39
LGMN-213ENST00000556790 TNNT1P13805 278 aa6.39□□□□□ -1.39
LGMN-213ENST00000556790 TSHRP16473 764 aa6.39□□□□□ -1.39
LGMN-213ENST00000556790 CKMT2P17540 419 aa6.39□□□□□ -1.39
LGMN-213ENST00000556790 IL4RP24394 825 aa6.39□□□□□ -1.39
LGMN-213ENST00000556790 NDST2P52849 883 aa6.39□□□□□ -1.39
LGMN-213ENST00000556790 CDH6P55285 790 aa6.39□□□□□ -1.39
LGMN-213ENST00000556790 YBEYP58557 167 aaPredicted RBP6.39□□□□□ -1.39
LGMN-213ENST00000556790 TRAF2Q12933 501 aa6.39□□□□□ -1.39
LGMN-213ENST00000556790 LBRQ14739 615 aaKnown RBP6.39□□□□□ -1.39
LGMN-213ENST00000556790 UGP2Q16851 508 aa6.39□□□□□ -1.39
LGMN-213ENST00000556790 ALG11Q2TAA5 492 aa6.39□□□□□ -1.39
LGMN-213ENST00000556790 PARP15Q460N3 678 aa6.39□□□□□ -1.39
LGMN-213ENST00000556790 PRRT3Q5FWE3 981 aa6.39□□□□□ -1.39
LGMN-213ENST00000556790 NEK5Q6P3R8 708 aa6.39□□□□□ -1.39
LGMN-213ENST00000556790 FOXR1Q6PIV2 292 aa6.39□□□□□ -1.39
LGMN-213ENST00000556790 ENPP7Q6UWV6 458 aa6.39□□□□□ -1.39
LGMN-213ENST00000556790 NPNTQ6UXI9 565 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms