RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 CCT4P50991 539 aaKnown RBP4.53□□□□□ -1.68
ATXN3-227ENST00000554491 HSD17B4P51659 736 aa4.53□□□□□ -1.68
ATXN3-227ENST00000554491 CHN2P52757 468 aa4.53□□□□□ -1.68
ATXN3-227ENST00000554491 MRPS5P82675 430 aaKnown RBP4.53□□□□□ -1.68
ATXN3-227ENST00000554491 HPCAP84074 193 aa4.53□□□□□ -1.68
ATXN3-227ENST00000554491 PRKCEQ02156 737 aa4.53□□□□□ -1.68
ATXN3-227ENST00000554491 KDSRQ06136 332 aa4.53□□□□□ -1.68
ATXN3-227ENST00000554491 SCAPQ12770 1279 aa4.53□□□□□ -1.68
ATXN3-227ENST00000554491 SMARCB1Q12824 385 aa4.53□□□□□ -1.68
ATXN3-227ENST00000554491 SNAPC2Q13487 334 aa4.53□□□□□ -1.68
ATXN3-227ENST00000554491 TUBB2AQ13885 445 aa4.53□□□□□ -1.68
ATXN3-227ENST00000554491 FRG1Q14331 258 aaKnown RBP4.53□□□□□ -1.68
ATXN3-227ENST00000554491 CASP8Q14790 479 aa4.53□□□□□ -1.68
ATXN3-227ENST00000554491 TCEA2Q15560 299 aa4.53□□□□□ -1.68
ATXN3-227ENST00000554491 C19orf54Q5BKX5 351 aa4.53□□□□□ -1.68
ATXN3-227ENST00000554491 PITRM1Q5JRX3 1037 aa4.53□□□□□ -1.68
ATXN3-227ENST00000554491 PRAMEF14Q5SWL7 426 aa4.53□□□□□ -1.68
ATXN3-227ENST00000554491 ABHD17BQ5VST6 288 aa4.53□□□□□ -1.68
ATXN3-227ENST00000554491 DAB2IPQ5VWQ8 1189 aa4.53□□□□□ -1.68
ATXN3-227ENST00000554491 METTL21CQ5VZV1 264 aa4.53□□□□□ -1.68
ATXN3-227ENST00000554491 MZT2AQ6P582 158 aa4.53□□□□□ -1.68
ATXN3-227ENST00000554491 C6orf89Q6UWU4 347 aa4.53□□□□□ -1.68
ATXN3-227ENST00000554491 RFPL4BQ6ZWI9 263 aa4.53□□□□□ -1.68
ATXN3-227ENST00000554491 RSRC2Q7L4I2 434 aaKnown RBP4.53□□□□□ -1.68
ATXN3-227ENST00000554491 AKAP14Q86UN6 197 aa4.53□□□□□ -1.68
ATXN3-227ENST00000554491 PLA2G4DQ86XP0 818 aa4.53□□□□□ -1.68
ATXN3-227ENST00000554491 PALB2Q86YC2 1186 aa4.53□□□□□ -1.68
ATXN3-227ENST00000554491 CLVS1Q8IUQ0 354 aaPredicted RBP4.53□□□□□ -1.68
ATXN3-227ENST00000554491 ST13P4Q8IZP2 240 aaPredicted RBP4.53□□□□□ -1.68
ATXN3-227ENST00000554491 BOLLQ8N9W6 283 aaKnown RBP4.53□□□□□ -1.68
ATXN3-227ENST00000554491 PPFIBP2Q8ND30 876 aa4.53□□□□□ -1.68
ATXN3-227ENST00000554491 OR6C4Q8NGE1 309 aa4.53□□□□□ -1.68
ATXN3-227ENST00000554491 OR52K1Q8NGK4 314 aa4.53□□□□□ -1.68
ATXN3-227ENST00000554491 OR14C36Q8NHC7 312 aa4.53□□□□□ -1.68
ATXN3-227ENST00000554491 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.53□□□□□ -1.68
ATXN3-227ENST00000554491 SNX33Q8WV41 574 aa4.53□□□□□ -1.68
ATXN3-227ENST00000554491 STON2Q8WXE9 905 aa4.53□□□□□ -1.68
ATXN3-227ENST00000554491 JPH3Q8WXH2 748 aaPredicted RBP4.53□□□□□ -1.68
ATXN3-227ENST00000554491 HDAC11Q96DB2 347 aa4.53□□□□□ -1.68
ATXN3-227ENST00000554491 STAMBPL1Q96FJ0 436 aa4.53□□□□□ -1.68
ATXN3-227ENST00000554491 SLC47A1Q96FL8 570 aa4.53□□□□□ -1.68
ATXN3-227ENST00000554491 PHACTR3Q96KR7 559 aa4.53□□□□□ -1.68
ATXN3-227ENST00000554491 NUDCD1Q96RS6 583 aa4.53□□□□□ -1.68
ATXN3-227ENST00000554491 LBHD1Q9BQE6 289 aaPredicted RBP4.53□□□□□ -1.68
ATXN3-227ENST00000554491 ZPBPQ9BS86 351 aa4.53□□□□□ -1.68
ATXN3-227ENST00000554491 DESI2Q9BSY9 194 aa4.53□□□□□ -1.68
ATXN3-227ENST00000554491 TUBB2BQ9BVA1 445 aa4.53□□□□□ -1.68
ATXN3-227ENST00000554491 KATNAL1Q9BW62 490 aa4.53□□□□□ -1.68
ATXN3-227ENST00000554491 NUSAP1Q9BXS6 441 aaKnown RBP4.53□□□□□ -1.68
ATXN3-227ENST00000554491 IFIH1Q9BYX4 1025 aaKnown RBP4.53□□□□□ -1.68
ATXN3-227ENST00000554491 SLC13A1Q9BZW2 595 aa4.53□□□□□ -1.68
ATXN3-227ENST00000554491 UNKQ9C0B0 810 aaKnown RBP4.53□□□□□ -1.68
ATXN3-227ENST00000554491 SNX25Q9H3E2 840 aa4.53□□□□□ -1.68
ATXN3-227ENST00000554491 ELAC1Q9H777 363 aaKnown RBP4.53□□□□□ -1.68
ATXN3-227ENST00000554491 HPS4Q9NQG7 708 aa4.53□□□□□ -1.68
ATXN3-227ENST00000554491 POLE3Q9NRF9 147 aa4.53□□□□□ -1.68
ATXN3-227ENST00000554491 HOMER2Q9NSB8 354 aa4.53□□□□□ -1.68
ATXN3-227ENST00000554491 IARS2Q9NSE4 1012 aaKnown RBP4.53□□□□□ -1.68
ATXN3-227ENST00000554491 SAMSN1Q9NSI8 373 aaKnown RBP4.53□□□□□ -1.68
ATXN3-227ENST00000554491 EHD3Q9NZN3 535 aa4.53□□□□□ -1.68
ATXN3-227ENST00000554491 FNIP2Q9P278 1114 aa4.53□□□□□ -1.68
ATXN3-227ENST00000554491 DBF4Q9UBU7 674 aaPredicted RBP4.53□□□□□ -1.68
ATXN3-227ENST00000554491 TEKT2Q9UIF3 430 aa4.53□□□□□ -1.68
ATXN3-227ENST00000554491 HPCAL4Q9UM19 191 aa4.53□□□□□ -1.68
ATXN3-227ENST00000554491 DNM3Q9UQ16 869 aa4.53□□□□□ -1.68
ATXN3-227ENST00000554491 DNAJC16Q9Y2G8 782 aa4.53□□□□□ -1.68
ATXN3-227ENST00000554491 HEY1Q9Y5J3 304 aa4.53□□□□□ -1.68
ATXN3-227ENST00000554491 DOCK2Q92608 1830 aa4.53□□□□□ -1.68
ATXN3-227ENST00000554491 A0A0G2JMZ2 1700 aa4.52□□□□□ -1.69
ATXN3-227ENST00000554491 AOX1Q06278 1338 aa4.52□□□□□ -1.69
ATXN3-227ENST00000554491 PHIPQ8WWQ0 1821 aa4.52□□□□□ -1.69
ATXN3-227ENST00000554491 A0A0G2JPF8 293 aa4.52□□□□□ -1.69
ATXN3-227ENST00000554491 GOLGA8QA0A0J9YX86 632 aa4.52□□□□□ -1.69
ATXN3-227ENST00000554491 C1orf232A0A0U1RR37 186 aa4.52□□□□□ -1.69
ATXN3-227ENST00000554491 PVALEFA0A1B0GWK0 134 aa4.52□□□□□ -1.69
ATXN3-227ENST00000554491 GOLGA8OA6NCC3 632 aa4.52□□□□□ -1.69
ATXN3-227ENST00000554491 HNRNPCL3B7ZW38 293 aa4.52□□□□□ -1.69
ATXN3-227ENST00000554491 GOLGA8NF8WBI6 632 aa4.52□□□□□ -1.69
ATXN3-227ENST00000554491 H0Y626 953 aa4.52□□□□□ -1.69
ATXN3-227ENST00000554491 SGK1O00141 431 aa4.52□□□□□ -1.69
ATXN3-227ENST00000554491 CACNB4O00305 520 aaPredicted RBP4.52□□□□□ -1.69
ATXN3-227ENST00000554491 HNRNPRO43390 633 aaKnown RBP4.52□□□□□ -1.69
ATXN3-227ENST00000554491 ATP9AO75110 1047 aa4.52□□□□□ -1.69
ATXN3-227ENST00000554491 PALMO75781 387 aa4.52□□□□□ -1.69
ATXN3-227ENST00000554491 ALDH1L1O75891 902 aa4.52□□□□□ -1.69
ATXN3-227ENST00000554491 KLHL2O95198 593 aa4.52□□□□□ -1.69
ATXN3-227ENST00000554491 TGDSO95455 350 aa4.52□□□□□ -1.69
ATXN3-227ENST00000554491 ESRRBO95718 433 aa4.52□□□□□ -1.69
ATXN3-227ENST00000554491 IFNA14P01570 189 aa4.52□□□□□ -1.69
ATXN3-227ENST00000554491 HLA-DOAP06340 250 aa4.52□□□□□ -1.69
ATXN3-227ENST00000554491 LPLP06858 475 aa4.52□□□□□ -1.69
ATXN3-227ENST00000554491 GSTA1P08263 222 aa4.52□□□□□ -1.69
ATXN3-227ENST00000554491 GNAI3P08754 354 aa4.52□□□□□ -1.69
ATXN3-227ENST00000554491 SPATA31D3P0C874 917 aa4.52□□□□□ -1.69
ATXN3-227ENST00000554491 UBTFL6P0CB48 400 aaPredicted RBP4.52□□□□□ -1.69
ATXN3-227ENST00000554491 HNRNPCL4P0DMR1 293 aa4.52□□□□□ -1.69
ATXN3-227ENST00000554491 PRKAR1AP10644 381 aa4.52□□□□□ -1.69
ATXN3-227ENST00000554491 ITGAMP11215 1152 aa4.52□□□□□ -1.69
ATXN3-227ENST00000554491 ATP6V1B1P15313 513 aa4.52□□□□□ -1.69
ATXN3-227ENST00000554491 PDGFRAP16234 1089 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms