RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 NFU1Q9UMS0 254 aa14.63□□□□□ -0.07
SHMT2-210ENST00000553950 SCML1Q9UN30 329 aa14.63□□□□□ -0.07
SHMT2-210ENST00000553950 KRBA1A5PL33 1030 aa14.62□□□□□ -0.07
SHMT2-210ENST00000553950 HLA-EP13747 358 aa14.62□□□□□ -0.07
SHMT2-210ENST00000553950 ITGB7P26010 798 aa14.62□□□□□ -0.07
SHMT2-210ENST00000553950 TARSP26639 723 aaKnown RBP14.62□□□□□ -0.07
SHMT2-210ENST00000553950 MAGEA3P43357 314 aa14.62□□□□□ -0.07
SHMT2-210ENST00000553950 NPY2RP49146 381 aa14.62□□□□□ -0.07
SHMT2-210ENST00000553950 ZXDAP98168 799 aa14.62□□□□□ -0.07
SHMT2-210ENST00000553950 PDE1BQ01064 536 aa14.62□□□□□ -0.07
SHMT2-210ENST00000553950 ZBTB16Q05516 673 aa14.62□□□□□ -0.07
SHMT2-210ENST00000553950 SIGLEC14Q08ET2 396 aa14.62□□□□□ -0.07
SHMT2-210ENST00000553950 TRAF2Q12933 501 aa14.62□□□□□ -0.07
SHMT2-210ENST00000553950 C2orf27AQ580R0 203 aa14.62□□□□□ -0.07
SHMT2-210ENST00000553950 ZNF805Q5CZA5 627 aa14.62□□□□□ -0.07
SHMT2-210ENST00000553950 RANBP10Q6VN20 620 aa14.62□□□□□ -0.07
SHMT2-210ENST00000553950 CCNI2Q6ZMN8 369 aaPredicted RBP14.62□□□□□ -0.07
SHMT2-210ENST00000553950 SFTPA1Q8IWL2 248 aa14.62□□□□□ -0.07
SHMT2-210ENST00000553950 PPHLN1Q8NEY8 458 aaKnown RBP14.62□□□□□ -0.07
SHMT2-210ENST00000553950 LPCAT1Q8NF37 534 aa14.62□□□□□ -0.07
SHMT2-210ENST00000553950 OR2T3Q8NH03 318 aa14.62□□□□□ -0.07
SHMT2-210ENST00000553950 GRIN3AQ8TCU5 1115 aa14.62□□□□□ -0.07
SHMT2-210ENST00000553950 PDCD6IPQ8WUM4 868 aaKnown RBP14.62□□□□□ -0.07
SHMT2-210ENST00000553950 RMDN1Q96DB5 314 aa14.62□□□□□ -0.07
SHMT2-210ENST00000553950 ECHDC3Q96DC8 303 aa14.62□□□□□ -0.07
SHMT2-210ENST00000553950 TTC25Q96NG3 672 aa14.62□□□□□ -0.07
SHMT2-210ENST00000553950 TRIB3Q96RU7 358 aa14.62□□□□□ -0.07
SHMT2-210ENST00000553950 ZNF106Q9H2Y7 1883 aaKnown RBP14.62□□□□□ -0.07
SHMT2-210ENST00000553950 TRABDQ9H4I3 376 aa14.62□□□□□ -0.07
SHMT2-210ENST00000553950 SUV39H2Q9H5I1 410 aa14.62□□□□□ -0.07
SHMT2-210ENST00000553950 TBC1D17Q9HA65 648 aa14.62□□□□□ -0.07
SHMT2-210ENST00000553950 PHTF1Q9UMS5 762 aa14.62□□□□□ -0.07
SHMT2-210ENST00000553950 WASF2Q9Y6W5 498 aa14.62□□□□□ -0.07
SHMT2-210ENST00000553950 SCN8AQ9UQD0 1980 aa14.62□□□□□ -0.07
SHMT2-210ENST00000553950 TCRBV7S3A2A0A539 114 aa14.61□□□□□ -0.07
SHMT2-210ENST00000553950 E7ESA3 106 aa14.61□□□□□ -0.07
SHMT2-210ENST00000553950 GOLGA8MH3BSY2 632 aa14.61□□□□□ -0.07
SHMT2-210ENST00000553950 TRAFD1O14545 582 aaPredicted RBP14.61□□□□□ -0.07
SHMT2-210ENST00000553950 FZD6O60353 706 aa14.61□□□□□ -0.07
SHMT2-210ENST00000553950 LEFTY1O75610 366 aa14.61□□□□□ -0.07
SHMT2-210ENST00000553950 PIGNO95427 931 aa14.61□□□□□ -0.07
SHMT2-210ENST00000553950 UGT2B4P06133 528 aa14.61□□□□□ -0.07
SHMT2-210ENST00000553950 CHRM1P11229 460 aaPredicted RBP14.61□□□□□ -0.07
SHMT2-210ENST00000553950 CHRNB1P11230 501 aa14.61□□□□□ -0.07
SHMT2-210ENST00000553950 XPAP23025 273 aaPredicted RBP14.61□□□□□ -0.07
SHMT2-210ENST00000553950 ECHS1P30084 290 aa14.61□□□□□ -0.07
SHMT2-210ENST00000553950 RPS9P46781 194 aaKnown RBP14.61□□□□□ -0.07
SHMT2-210ENST00000553950 TTC31Q49AM3 519 aaPredicted RBP14.61□□□□□ -0.07
SHMT2-210ENST00000553950 ZNF534Q76KX8 674 aa14.61□□□□□ -0.07
SHMT2-210ENST00000553950 NLRP9Q7RTR0 991 aa14.61□□□□□ -0.07
SHMT2-210ENST00000553950 CAMK1DQ8IU85 385 aa14.61□□□□□ -0.07
SHMT2-210ENST00000553950 RELL1Q8IUW5 271 aa14.61□□□□□ -0.07
SHMT2-210ENST00000553950 STK40Q8N2I9 435 aa14.61□□□□□ -0.07
SHMT2-210ENST00000553950 ZNF366Q8N895 744 aa14.61□□□□□ -0.07
SHMT2-210ENST00000553950 TXNDC5Q8NBS9 432 aaKnown RBP14.61□□□□□ -0.07
SHMT2-210ENST00000553950 CHST14Q8NCH0 376 aa14.61□□□□□ -0.07
SHMT2-210ENST00000553950 PJA1Q8NG27 643 aa14.61□□□□□ -0.07
SHMT2-210ENST00000553950 PIP4K2CQ8TBX8 421 aa14.61□□□□□ -0.07
SHMT2-210ENST00000553950 PEX13Q92968 403 aa14.61□□□□□ -0.07
SHMT2-210ENST00000553950 RAB7BQ96AH8 199 aa14.61□□□□□ -0.07
SHMT2-210ENST00000553950 UHRF1Q96T88 793 aaPredicted RBP14.61□□□□□ -0.07
SHMT2-210ENST00000553950 RSPH9Q9H1X1 276 aaPredicted RBP14.61□□□□□ -0.07
SHMT2-210ENST00000553950 MFSD1Q9H3U5 465 aa14.61□□□□□ -0.07
SHMT2-210ENST00000553950 POLMQ9NP87 494 aaPredicted RBP14.61□□□□□ -0.07
SHMT2-210ENST00000553950 PRSS16Q9NQE7 514 aa14.61□□□□□ -0.07
SHMT2-210ENST00000553950 CHKBQ9Y259 395 aa14.61□□□□□ -0.07
SHMT2-210ENST00000553950 PCDHB9Q9Y5E1 797 aa14.61□□□□□ -0.07
SHMT2-210ENST00000553950 PCDHGC4Q9Y5F7 938 aa14.61□□□□□ -0.07
SHMT2-210ENST00000553950 MAGEB16A2A368 324 aa14.6□□□□□ -0.07
SHMT2-210ENST00000553950 HEATR9A2RTY3 570 aa14.6□□□□□ -0.07
SHMT2-210ENST00000553950 CAPN8A6NHC0 703 aa14.6□□□□□ -0.07
SHMT2-210ENST00000553950 SDR42E2A6NKP2 422 aa14.6□□□□□ -0.07
SHMT2-210ENST00000553950 SHISA7A6NL88 538 aa14.6□□□□□ -0.07
SHMT2-210ENST00000553950 UPK3BL1B0FP48 263 aa14.6□□□□□ -0.07
SHMT2-210ENST00000553950 UPK3BL2E5RIL1 263 aa14.6□□□□□ -0.07
SHMT2-210ENST00000553950 KPNA3O00505 521 aaPredicted RBP14.6□□□□□ -0.07
SHMT2-210ENST00000553950 TP73O15350 636 aa14.6□□□□□ -0.07
SHMT2-210ENST00000553950 DCXO43602 365 aa14.6□□□□□ -0.07
SHMT2-210ENST00000553950 SPAG6O75602 509 aa14.6□□□□□ -0.07
SHMT2-210ENST00000553950 GJB3O75712 270 aa14.6□□□□□ -0.07
SHMT2-210ENST00000553950 CRTAMO95727 393 aa14.6□□□□□ -0.07
SHMT2-210ENST00000553950 IL1BP01584 269 aa14.6□□□□□ -0.07
SHMT2-210ENST00000553950 ATXN1LP0C7T5 689 aaKnown RBP14.6□□□□□ -0.07
SHMT2-210ENST00000553950 CYP2A6P11509 494 aaPredicted RBP14.6□□□□□ -0.07
SHMT2-210ENST00000553950 TSHRP16473 764 aa14.6□□□□□ -0.07
SHMT2-210ENST00000553950 C5AR1P21730 350 aa14.6□□□□□ -0.07
SHMT2-210ENST00000553950 NEK3P51956 506 aa14.6□□□□□ -0.07
SHMT2-210ENST00000553950 DGKEP52429 567 aa14.6□□□□□ -0.07
SHMT2-210ENST00000553950 ELP6Q0PNE2 266 aa14.6□□□□□ -0.07
SHMT2-210ENST00000553950 CCDC38Q502W7 563 aa14.6□□□□□ -0.07
SHMT2-210ENST00000553950 SIRPB2Q5JXA9 342 aa14.6□□□□□ -0.07
SHMT2-210ENST00000553950 SPDYCQ5MJ68 293 aa14.6□□□□□ -0.07
SHMT2-210ENST00000553950 SYCP2LQ5T4T6 812 aa14.6□□□□□ -0.07
SHMT2-210ENST00000553950 IER5LQ5T953 404 aa14.6□□□□□ -0.07
SHMT2-210ENST00000553950 EMC10Q5UCC4 262 aa14.6□□□□□ -0.07
SHMT2-210ENST00000553950 ERAP2Q6P179 960 aa14.6□□□□□ -0.07
SHMT2-210ENST00000553950 SYT13Q7L8C5 426 aa14.6□□□□□ -0.07
SHMT2-210ENST00000553950 CCDC25Q86WR0 208 aa14.6□□□□□ -0.07
SHMT2-210ENST00000553950 OR52K1Q8NGK4 314 aa14.6□□□□□ -0.07
SHMT2-210ENST00000553950 CAVIN3Q969G5 261 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms