RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 TTC31Q49AM3 519 aaPredicted RBP13.15□□□□□ -0.3
RAB5C-206ENST00000550406 USP39Q53GS9 565 aaKnown RBP13.15□□□□□ -0.3
RAB5C-206ENST00000550406 LRRC73Q5JTD7 316 aa13.15□□□□□ -0.3
RAB5C-206ENST00000550406 FAXCQ5TGI0 409 aa13.15□□□□□ -0.3
RAB5C-206ENST00000550406 ZNF572Q7Z3I7 529 aaPredicted RBP13.15□□□□□ -0.3
RAB5C-206ENST00000550406 KBTBD6Q86V97 674 aa13.15□□□□□ -0.3
RAB5C-206ENST00000550406 SPOCK2Q92563 424 aa13.15□□□□□ -0.3
RAB5C-206ENST00000550406 TOE1Q96GM8 510 aaKnown RBP13.15□□□□□ -0.3
RAB5C-206ENST00000550406 TDRD1Q9BXT4 1180 aaKnown RBP13.15□□□□□ -0.3
RAB5C-206ENST00000550406 PCYOX1Q9UHG3 505 aa13.15□□□□□ -0.3
RAB5C-206ENST00000550406 GGT7Q9UJ14 662 aa13.15□□□□□ -0.3
RAB5C-206ENST00000550406 FZD4Q9ULV1 537 aa13.15□□□□□ -0.3
RAB5C-206ENST00000550406 ESPNB1AK53 854 aa13.14□□□□□ -0.31
RAB5C-206ENST00000550406 AREL1O15033 823 aa13.14□□□□□ -0.31
RAB5C-206ENST00000550406 PLRG1O43660 514 aaKnown RBP13.14□□□□□ -0.31
RAB5C-206ENST00000550406 PMPCBO75439 489 aa13.14□□□□□ -0.31
RAB5C-206ENST00000550406 ZNF189O75820 626 aaPredicted RBP13.14□□□□□ -0.31
RAB5C-206ENST00000550406 STK10O94804 968 aaKnown RBP13.14□□□□□ -0.31
RAB5C-206ENST00000550406 CD6P30203 668 aa13.14□□□□□ -0.31
RAB5C-206ENST00000550406 FNTAP49354 379 aa13.14□□□□□ -0.31
RAB5C-206ENST00000550406 NEK3P51956 506 aa13.14□□□□□ -0.31
RAB5C-206ENST00000550406 ADPRHP54922 357 aa13.14□□□□□ -0.31
RAB5C-206ENST00000550406 WNT3AP56704 352 aa13.14□□□□□ -0.31
RAB5C-206ENST00000550406 SEMG2Q02383 582 aa13.14□□□□□ -0.31
RAB5C-206ENST00000550406 TRIP13Q15645 432 aaPredicted RBP13.14□□□□□ -0.31
RAB5C-206ENST00000550406 UGP2Q16851 508 aa13.14□□□□□ -0.31
RAB5C-206ENST00000550406 PARP6Q2NL67 630 aa13.14□□□□□ -0.31
RAB5C-206ENST00000550406 KCTD11Q693B1 232 aa13.14□□□□□ -0.31
RAB5C-206ENST00000550406 ITPRIPL1Q6GPH6 555 aa13.14□□□□□ -0.31
RAB5C-206ENST00000550406 ARHGEF18Q6ZSZ5 1173 aa13.14□□□□□ -0.31
RAB5C-206ENST00000550406 TTC7BQ86TV6 843 aa13.14□□□□□ -0.31
RAB5C-206ENST00000550406 KLHL7Q8IXQ5 586 aa13.14□□□□□ -0.31
RAB5C-206ENST00000550406 TAB3Q8N5C8 712 aaPredicted RBP13.14□□□□□ -0.31
RAB5C-206ENST00000550406 SPATA4Q8NEY3 305 aa13.14□□□□□ -0.31
RAB5C-206ENST00000550406 KIF18AQ8NI77 898 aa13.14□□□□□ -0.31
RAB5C-206ENST00000550406 GANCQ8TET4 914 aa13.14□□□□□ -0.31
RAB5C-206ENST00000550406 GAB3Q8WWW8 586 aa13.14□□□□□ -0.31
RAB5C-206ENST00000550406 PPP1R16AQ96I34 528 aa13.14□□□□□ -0.31
RAB5C-206ENST00000550406 FERMT1Q9BQL6 677 aa13.14□□□□□ -0.31
RAB5C-206ENST00000550406 C6orf106Q9H6K1 298 aaPredicted RBP13.14□□□□□ -0.31
RAB5C-206ENST00000550406 ETNK1Q9HBU6 452 aa13.14□□□□□ -0.31
RAB5C-206ENST00000550406 PCDH9Q9HC56 1237 aa13.14□□□□□ -0.31
RAB5C-206ENST00000550406 FAM153AQ9UHL3 310 aa13.14□□□□□ -0.31
RAB5C-206ENST00000550406 ITM2BQ9Y287 266 aa13.14□□□□□ -0.31
RAB5C-206ENST00000550406 NCKAP1Q9Y2A7 1128 aa13.14□□□□□ -0.31
RAB5C-206ENST00000550406 PPIL1Q9Y3C6 166 aa13.14□□□□□ -0.31
RAB5C-206ENST00000550406 PCDHB9Q9Y5E1 797 aa13.14□□□□□ -0.31
RAB5C-206ENST00000550406 FADS3Q9Y5Q0 445 aa13.14□□□□□ -0.31
RAB5C-206ENST00000550406 MRFAP1Q9Y605 127 aa13.14□□□□□ -0.31
RAB5C-206ENST00000550406 SCN8AQ9UQD0 1980 aa13.14□□□□□ -0.31
RAB5C-206ENST00000550406 GOLGA6L10A0A0M3HER8 536 aa13.13□□□□□ -0.31
RAB5C-206ENST00000550406 A0A0U1RQS6 177 aa13.13□□□□□ -0.31
RAB5C-206ENST00000550406 LOC285095A0A1B0GVY8 99 aa13.13□□□□□ -0.31
RAB5C-206ENST00000550406 UPK3BL1B0FP48 263 aa13.13□□□□□ -0.31
RAB5C-206ENST00000550406 UPK3BL2E5RIL1 263 aa13.13□□□□□ -0.31
RAB5C-206ENST00000550406 CCDC188H7C350 402 aa13.13□□□□□ -0.31
RAB5C-206ENST00000550406 SLC7A4O43246 635 aa13.13□□□□□ -0.31
RAB5C-206ENST00000550406 RPP40O75818 363 aaKnown RBP13.13□□□□□ -0.31
RAB5C-206ENST00000550406 KRT14P02533 472 aa13.13□□□□□ -0.31
RAB5C-206ENST00000550406 OXTRP30559 389 aa13.13□□□□□ -0.31
RAB5C-206ENST00000550406 ADRA1AP35348 466 aa13.13□□□□□ -0.31
RAB5C-206ENST00000550406 MPP3Q13368 585 aa13.13□□□□□ -0.31
RAB5C-206ENST00000550406 SPARCL1Q14515 664 aa13.13□□□□□ -0.31
RAB5C-206ENST00000550406 PCSK7Q16549 785 aa13.13□□□□□ -0.31
RAB5C-206ENST00000550406 QPCTQ16769 361 aa13.13□□□□□ -0.31
RAB5C-206ENST00000550406 ARMC12Q5T9G4 340 aa13.13□□□□□ -0.31
RAB5C-206ENST00000550406 FBXL19Q6PCT2 694 aa13.13□□□□□ -0.31
RAB5C-206ENST00000550406 BRAT1Q6PJG6 821 aa13.13□□□□□ -0.31
RAB5C-206ENST00000550406 KDELC2Q7Z4H8 507 aa13.13□□□□□ -0.31
RAB5C-206ENST00000550406 DEFB119Q8N690 84 aa13.13□□□□□ -0.31
RAB5C-206ENST00000550406 OR14C36Q8NHC7 312 aa13.13□□□□□ -0.31
RAB5C-206ENST00000550406 PDCD6IPQ8WUM4 868 aaKnown RBP13.13□□□□□ -0.31
RAB5C-206ENST00000550406 SLCO2A1Q92959 643 aa13.13□□□□□ -0.31
RAB5C-206ENST00000550406 GPR174Q9BXC1 333 aa13.13□□□□□ -0.31
RAB5C-206ENST00000550406 BTBD1Q9H0C5 482 aa13.13□□□□□ -0.31
RAB5C-206ENST00000550406 SGK2Q9HBY8 427 aa13.13□□□□□ -0.31
RAB5C-206ENST00000550406 PCDH12Q9NPG4 1184 aa13.13□□□□□ -0.31
RAB5C-206ENST00000550406 DYRK4Q9NR20 520 aa13.13□□□□□ -0.31
RAB5C-206ENST00000550406 HAUS2Q9NVX0 235 aa13.13□□□□□ -0.31
RAB5C-206ENST00000550406 PAK5Q9P286 719 aa13.13□□□□□ -0.31
RAB5C-206ENST00000550406 PHTF1Q9UMS5 762 aa13.13□□□□□ -0.31
RAB5C-206ENST00000550406 PCDHGA2Q9Y5H1 932 aa13.13□□□□□ -0.31
RAB5C-206ENST00000550406 R4GN57 208 aa13.13□□□□□ -0.31
RAB5C-206ENST00000550406 RIOK3O14730 519 aaKnown RBP13.12□□□□□ -0.31
RAB5C-206ENST00000550406 AP1G1O43747 822 aa13.12□□□□□ -0.31
RAB5C-206ENST00000550406 SEMA4FO95754 770 aa13.12□□□□□ -0.31
RAB5C-206ENST00000550406 CPP00450 1065 aa13.12□□□□□ -0.31
RAB5C-206ENST00000550406 AGTP01019 485 aa13.12□□□□□ -0.31
RAB5C-206ENST00000550406 ATXN1LP0C7T5 689 aaKnown RBP13.12□□□□□ -0.31
RAB5C-206ENST00000550406 CTPS1P17812 591 aa13.12□□□□□ -0.31
RAB5C-206ENST00000550406 CHRNA4P43681 627 aa13.12□□□□□ -0.31
RAB5C-206ENST00000550406 GEMP55040 296 aa13.12□□□□□ -0.31
RAB5C-206ENST00000550406 CDK18Q07002 472 aa13.12□□□□□ -0.31
RAB5C-206ENST00000550406 C2orf54Q08AI8 447 aa13.12□□□□□ -0.31
RAB5C-206ENST00000550406 RALGDSQ12967 914 aa13.12□□□□□ -0.31
RAB5C-206ENST00000550406 MSLNQ13421 630 aaPredicted RBP13.12□□□□□ -0.31
RAB5C-206ENST00000550406 GALNT3Q14435 633 aa13.12□□□□□ -0.31
RAB5C-206ENST00000550406 WHAMMP3Q1A5X7 153 aa13.12□□□□□ -0.31
RAB5C-206ENST00000550406 TMEM52BQ4KMG9 183 aa13.12□□□□□ -0.31
RAB5C-206ENST00000550406 SYCP2LQ5T4T6 812 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms