RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 WDR49Q8IV35 697 aa12.72□□□□□ -0.37
DDX55-206ENST00000539934 SYCE1Q8N0S2 351 aa12.72□□□□□ -0.37
DDX55-206ENST00000539934 SLC4A11Q8NBS3 891 aa12.72□□□□□ -0.37
DDX55-206ENST00000539934 OR7D4Q8NG98 312 aa12.72□□□□□ -0.37
DDX55-206ENST00000539934 RFWD2Q8NHY2 731 aa12.72□□□□□ -0.37
DDX55-206ENST00000539934 SLC35G2Q8TBE7 412 aa12.72□□□□□ -0.37
DDX55-206ENST00000539934 COL26A1Q96A83 441 aa12.72□□□□□ -0.37
DDX55-206ENST00000539934 RAD51AP1Q96B01 352 aa12.72□□□□□ -0.37
DDX55-206ENST00000539934 MKRN2Q9H000 416 aaKnown RBP12.72□□□□□ -0.37
DDX55-206ENST00000539934 THAP2Q9H0W7 228 aa12.72□□□□□ -0.37
DDX55-206ENST00000539934 GOLPH3Q9H4A6 298 aa12.72□□□□□ -0.37
DDX55-206ENST00000539934 ARMC7Q9H6L4 198 aa12.72□□□□□ -0.37
DDX55-206ENST00000539934 LRRC19Q9H756 370 aa12.72□□□□□ -0.37
DDX55-206ENST00000539934 SH3BGRL2Q9UJC5 107 aa12.72□□□□□ -0.37
DDX55-206ENST00000539934 CAB39Q9Y376 341 aaPredicted RBP12.72□□□□□ -0.37
DDX55-206ENST00000539934 CHTOPQ9Y3Y2 248 aaKnown RBP12.72□□□□□ -0.37
DDX55-206ENST00000539934 NCANO14594 1321 aa12.72□□□□□ -0.37
DDX55-206ENST00000539934 ZFHX2Q9C0A1 2572 aaPredicted RBP12.72□□□□□ -0.37
DDX55-206ENST00000539934 ACOX3O15254 700 aa12.72□□□□□ -0.37
DDX55-206ENST00000539934 PIP5K1CO60331 668 aa12.72□□□□□ -0.37
DDX55-206ENST00000539934 FTLP02792 175 aaPredicted RBP12.72□□□□□ -0.37
DDX55-206ENST00000539934 HOXB3P14651 431 aaPredicted RBP12.72□□□□□ -0.37
DDX55-206ENST00000539934 PROZP22891 400 aa12.72□□□□□ -0.37
DDX55-206ENST00000539934 SULT1E1P49888 294 aa12.72□□□□□ -0.37
DDX55-206ENST00000539934 STX1BP61266 288 aa12.72□□□□□ -0.37
DDX55-206ENST00000539934 OSTNP61366 133 aa12.72□□□□□ -0.37
DDX55-206ENST00000539934 NKX3-2P78367 333 aa12.72□□□□□ -0.37
DDX55-206ENST00000539934 NCOA4Q13772 614 aa12.72□□□□□ -0.37
DDX55-206ENST00000539934 RPS6KA1Q15418 735 aa12.72□□□□□ -0.37
DDX55-206ENST00000539934 C5orf22Q49AR2 442 aa12.72□□□□□ -0.37
DDX55-206ENST00000539934 DCAF6Q58WW2 860 aa12.72□□□□□ -0.37
DDX55-206ENST00000539934 ERMARDQ5T6L9 678 aa12.72□□□□□ -0.37
DDX55-206ENST00000539934 AGBL2Q5U5Z8 902 aa12.72□□□□□ -0.37
DDX55-206ENST00000539934 LINC01465Q8N7H1 131 aa12.72□□□□□ -0.37
DDX55-206ENST00000539934 OMA1Q96E52 524 aa12.72□□□□□ -0.37
DDX55-206ENST00000539934 CHFRQ96EP1 664 aa12.72□□□□□ -0.37
DDX55-206ENST00000539934 HERPUD2Q9BSE4 406 aa12.72□□□□□ -0.37
DDX55-206ENST00000539934 SLC6A17Q9H1V8 727 aa12.72□□□□□ -0.37
DDX55-206ENST00000539934 LRMDAQ9H2I8 198 aa12.72□□□□□ -0.37
DDX55-206ENST00000539934 ETNK1Q9HBU6 452 aa12.72□□□□□ -0.37
DDX55-206ENST00000539934 OSGEPQ9NPF4 335 aa12.72□□□□□ -0.37
DDX55-206ENST00000539934 TXLNGQ9NUQ3 528 aa12.72□□□□□ -0.37
DDX55-206ENST00000539934 PLK2Q9NYY3 685 aa12.72□□□□□ -0.37
DDX55-206ENST00000539934 EXTL2Q9UBQ6 330 aa12.72□□□□□ -0.37
DDX55-206ENST00000539934 ZNF212Q9UDV6 495 aa12.72□□□□□ -0.37
DDX55-206ENST00000539934 POU2F3Q9UKI9 436 aa12.72□□□□□ -0.37
DDX55-206ENST00000539934 TNFSF13BQ9Y275 285 aa12.72□□□□□ -0.37
DDX55-206ENST00000539934 PTPRSQ13332 1948 aa12.71□□□□□ -0.37
DDX55-206ENST00000539934 COL4A4P53420 1690 aaPredicted RBP12.71□□□□□ -0.37
DDX55-206ENST00000539934 ZNF98A6NK75 572 aa12.71□□□□□ -0.37
DDX55-206ENST00000539934 C9IYK1 514 aa12.71□□□□□ -0.37
DDX55-206ENST00000539934 UBXN8O00124 270 aa12.71□□□□□ -0.37
DDX55-206ENST00000539934 CSDE1O75534 798 aaKnown RBP12.71□□□□□ -0.37
DDX55-206ENST00000539934 HOXD8P13378 290 aaPredicted RBP12.71□□□□□ -0.37
DDX55-206ENST00000539934 CHRNB2P17787 502 aa12.71□□□□□ -0.37
DDX55-206ENST00000539934 GRIA2P42262 883 aa12.71□□□□□ -0.37
DDX55-206ENST00000539934 HK2P52789 917 aa12.71□□□□□ -0.37
DDX55-206ENST00000539934 CDR2Q01850 454 aa12.71□□□□□ -0.37
DDX55-206ENST00000539934 TCTN1Q2MV58 587 aa12.71□□□□□ -0.37
DDX55-206ENST00000539934 ZNF829Q3KNS6 432 aaPredicted RBP12.71□□□□□ -0.37
DDX55-206ENST00000539934 C6orf10Q5SRN2 563 aa12.71□□□□□ -0.37
DDX55-206ENST00000539934 EEF1DP3Q658K8 133 aa12.71□□□□□ -0.37
DDX55-206ENST00000539934 PLEKHA7Q6IQ23 1121 aa12.71□□□□□ -0.37
DDX55-206ENST00000539934 TMC5Q6UXY8 1006 aa12.71□□□□□ -0.37
DDX55-206ENST00000539934 CAMK1DQ8IU85 385 aa12.71□□□□□ -0.37
DDX55-206ENST00000539934 MMGT1Q8N4V1 131 aa12.71□□□□□ -0.37
DDX55-206ENST00000539934 LRRC57Q8N9N7 239 aa12.71□□□□□ -0.37
DDX55-206ENST00000539934 OR8K3Q8NH51 312 aa12.71□□□□□ -0.37
DDX55-206ENST00000539934 RAB7BQ96AH8 199 aa12.71□□□□□ -0.37
DDX55-206ENST00000539934 ARHGEF26Q96DR7 871 aa12.71□□□□□ -0.37
DDX55-206ENST00000539934 SLC9A7Q96T83 725 aa12.71□□□□□ -0.37
DDX55-206ENST00000539934 ISCUQ9H1K1 167 aa12.71□□□□□ -0.37
DDX55-206ENST00000539934 UBE2ZQ9H832 354 aaPredicted RBP12.71□□□□□ -0.37
DDX55-206ENST00000539934 CPNE7Q9UBL6 633 aa12.71□□□□□ -0.37
DDX55-206ENST00000539934 NOD1Q9Y239 953 aa12.71□□□□□ -0.37
DDX55-206ENST00000539934 DERAQ9Y315 318 aa12.71□□□□□ -0.37
DDX55-206ENST00000539934 SPTBN4Q9H254 2564 aa12.71□□□□□ -0.38
DDX55-206ENST00000539934 ZDBF2Q9HCK1 2354 aa12.71□□□□□ -0.38
DDX55-206ENST00000539934 TARM1B6A8C7 271 aa12.7□□□□□ -0.38
DDX55-206ENST00000539934 MTSS1O43312 755 aa12.7□□□□□ -0.38
DDX55-206ENST00000539934 ATG13O75143 517 aa12.7□□□□□ -0.38
DDX55-206ENST00000539934 SULT1C4O75897 302 aa12.7□□□□□ -0.38
DDX55-206ENST00000539934 DCTN3O75935 186 aa12.7□□□□□ -0.38
DDX55-206ENST00000539934 TMEM191BP0C7N4 346 aa12.7□□□□□ -0.38
DDX55-206ENST00000539934 GM2AP17900 193 aa12.7□□□□□ -0.38
DDX55-206ENST00000539934 CCNA2P20248 432 aa12.7□□□□□ -0.38
DDX55-206ENST00000539934 NPY2RP49146 381 aa12.7□□□□□ -0.38
DDX55-206ENST00000539934 ARHGDIAP52565 204 aa12.7□□□□□ -0.38
DDX55-206ENST00000539934 ERVK-21P61565 698 aa12.7□□□□□ -0.38
DDX55-206ENST00000539934 FMO1Q01740 532 aa12.7□□□□□ -0.38
DDX55-206ENST00000539934 CUL2Q13617 745 aa12.7□□□□□ -0.38
DDX55-206ENST00000539934 CCDC6Q16204 474 aa12.7□□□□□ -0.38
DDX55-206ENST00000539934 PPP1R26Q5T8A7 1209 aaPredicted RBP12.7□□□□□ -0.38
DDX55-206ENST00000539934 ELMSAN1Q6PJG2 1045 aa12.7□□□□□ -0.38
DDX55-206ENST00000539934 TAS2R42Q7RTR8 314 aa12.7□□□□□ -0.38
DDX55-206ENST00000539934 KIF2BQ8N4N8 673 aa12.7□□□□□ -0.38
DDX55-206ENST00000539934 DNAAF3Q8N9W5 541 aa12.7□□□□□ -0.38
DDX55-206ENST00000539934 KCTD4Q8WVF5 259 aa12.7□□□□□ -0.38
DDX55-206ENST00000539934 INPP5DQ92835 1189 aa12.7□□□□□ -0.38
DDX55-206ENST00000539934 UTP4Q969X6 686 aaKnown RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms