RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 SSU72Q9NP77 194 aaKnown RBP8.95□□□□□ -0.98
DDB1-213ENST00000539332 RBM22Q9NW64 420 aaKnown RBP eCLIP8.95□□□□□ -0.986e-7■■■■□ 20.6
DDB1-213ENST00000539332 SYBUQ9NX95 663 aa8.95□□□□□ -0.98
DDB1-213ENST00000539332 NKIRAS1Q9NYS0 192 aa8.95□□□□□ -0.98
DDB1-213ENST00000539332 G3BP2Q9UN86 482 aaKnown RBP8.95□□□□□ -0.98
DDB1-213ENST00000539332 ZNF510Q9Y2H8 683 aa8.95□□□□□ -0.98
DDB1-213ENST00000539332 ZFP37Q9Y6Q3 630 aaPredicted RBP8.95□□□□□ -0.98
DDB1-213ENST00000539332 BPTFQ12830 3046 aa8.95□□□□□ -0.98
DDB1-213ENST00000539332 SCN8AQ9UQD0 1980 aa8.95□□□□□ -0.98
DDB1-213ENST00000539332 COL6A3P12111 3177 aa8.94□□□□□ -0.98
DDB1-213ENST00000539332 ZNF106Q9H2Y7 1883 aaKnown RBP8.94□□□□□ -0.98
DDB1-213ENST00000539332 MMP2P08253 660 aa8.94□□□□□ -0.98
DDB1-213ENST00000539332 LINGO3P0C6S8 592 aa8.94□□□□□ -0.98
DDB1-213ENST00000539332 GNAZP19086 355 aa8.94□□□□□ -0.98
DDB1-213ENST00000539332 MGAT1P26572 445 aa8.94□□□□□ -0.98
DDB1-213ENST00000539332 WEE1P30291 646 aa8.94□□□□□ -0.98
DDB1-213ENST00000539332 ALDH3A1P30838 453 aa8.94□□□□□ -0.98
DDB1-213ENST00000539332 ACVRL1P37023 503 aa8.94□□□□□ -0.98
DDB1-213ENST00000539332 NPY2RP49146 381 aa8.94□□□□□ -0.98
DDB1-213ENST00000539332 SLC18A1P54219 525 aa8.94□□□□□ -0.98
DDB1-213ENST00000539332 MXRA7P84157 204 aa8.94□□□□□ -0.98
DDB1-213ENST00000539332 GNA12Q03113 381 aa8.94□□□□□ -0.98
DDB1-213ENST00000539332 KLC1Q07866 573 aa8.94□□□□□ -0.98
DDB1-213ENST00000539332 NIPAL4Q0D2K0 466 aa8.94□□□□□ -0.98
DDB1-213ENST00000539332 MPP3Q13368 585 aa8.94□□□□□ -0.98
DDB1-213ENST00000539332 DYNC1I2Q13409 638 aaKnown RBP8.94□□□□□ -0.98
DDB1-213ENST00000539332 OLIG2Q13516 323 aa8.94□□□□□ -0.98
DDB1-213ENST00000539332 SPARCL1Q14515 664 aa8.94□□□□□ -0.98
DDB1-213ENST00000539332 TMED2Q15363 201 aa8.94□□□□□ -0.98
DDB1-213ENST00000539332 SLC14A2Q15849 920 aa8.94□□□□□ -0.98
DDB1-213ENST00000539332 FAM78AQ5JUQ0 283 aa8.94□□□□□ -0.98
DDB1-213ENST00000539332 DENND5AQ6IQ26 1287 aa8.94□□□□□ -0.98
DDB1-213ENST00000539332 CXorf57Q6NSI4 855 aaKnown RBP8.94□□□□□ -0.98
DDB1-213ENST00000539332 IRGCQ6NXR0 463 aa8.94□□□□□ -0.98
DDB1-213ENST00000539332 MARK2Q7KZI7 788 aaKnown RBP8.94□□□□□ -0.98
DDB1-213ENST00000539332 PRPF39Q86UA1 669 aaKnown RBP8.94□□□□□ -0.98
DDB1-213ENST00000539332 TMEM135Q86UB9 458 aa8.94□□□□□ -0.98
DDB1-213ENST00000539332 KIRREL3Q8IZU9 778 aa8.94□□□□□ -0.98
DDB1-213ENST00000539332 GALNT15Q8N3T1 639 aa8.94□□□□□ -0.98
DDB1-213ENST00000539332 CELF5Q8N6W0 485 aaKnown RBP8.94□□□□□ -0.98
DDB1-213ENST00000539332 SMRP1Q8NCR6 262 aa8.94□□□□□ -0.98
DDB1-213ENST00000539332 OR52K2Q8NGK3 314 aa8.94□□□□□ -0.98
DDB1-213ENST00000539332 OR52K1Q8NGK4 314 aa8.94□□□□□ -0.98
DDB1-213ENST00000539332 RNF217Q8TC41 542 aa8.94□□□□□ -0.98
DDB1-213ENST00000539332 USP33Q8TEY7 942 aa8.94□□□□□ -0.98
DDB1-213ENST00000539332 TRAPPC9Q96Q05 1148 aa8.94□□□□□ -0.98
DDB1-213ENST00000539332 CCDC28BQ9BUN5 200 aa8.94□□□□□ -0.98
DDB1-213ENST00000539332 ACE2Q9BYF1 805 aaPredicted RBP8.94□□□□□ -0.98
DDB1-213ENST00000539332 SP110Q9HB58 689 aa8.94□□□□□ -0.98
DDB1-213ENST00000539332 ARNT2Q9HBZ2 717 aa8.94□□□□□ -0.98
DDB1-213ENST00000539332 SMYD2Q9NRG4 433 aa8.94□□□□□ -0.98
DDB1-213ENST00000539332 PAPOLBQ9NRJ5 636 aaKnown RBP8.94□□□□□ -0.98
DDB1-213ENST00000539332 VPS45Q9NRW7 570 aa8.94□□□□□ -0.98
DDB1-213ENST00000539332 FGFR1OP2Q9NVK5 253 aa8.94□□□□□ -0.98
DDB1-213ENST00000539332 GDE1Q9NZC3 331 aa8.94□□□□□ -0.98
DDB1-213ENST00000539332 TRIOO75962 3097 aa8.94□□□□□ -0.98
DDB1-213ENST00000539332 MYO10Q9HD67 2058 aa8.94□□□□□ -0.98
DDB1-213ENST00000539332 FAM237BA0A1B0GVD1 139 aa8.94□□□□□ -0.98
DDB1-213ENST00000539332 TMEM120BA0PK00 339 aa8.94□□□□□ -0.98
DDB1-213ENST00000539332 TTC36A6NLP5 189 aa8.94□□□□□ -0.98
DDB1-213ENST00000539332 POC1B-GALNT4F8VUJ3 575 aa8.94□□□□□ -0.98
DDB1-213ENST00000539332 PRPF4O43172 522 aaKnown RBP eCLIP8.94□□□□□ -0.98
DDB1-213ENST00000539332 TSPAN3O60637 253 aa8.94□□□□□ -0.98
DDB1-213ENST00000539332 SMIM24O75264 130 aa8.94□□□□□ -0.98
DDB1-213ENST00000539332 SKAP2O75563 359 aaPredicted RBP8.94□□□□□ -0.98
DDB1-213ENST00000539332 USP1O94782 785 aa8.94□□□□□ -0.98
DDB1-213ENST00000539332 ETFBP38117 255 aa8.94□□□□□ -0.98
DDB1-213ENST00000539332 SESN2P58004 480 aaPredicted RBP8.94□□□□□ -0.98
DDB1-213ENST00000539332 IL9RQ01113 521 aa8.94□□□□□ -0.98
DDB1-213ENST00000539332 SLC10A7Q0GE19 358 aa8.94□□□□□ -0.98
DDB1-213ENST00000539332 CDH17Q12864 832 aa8.94□□□□□ -0.98
DDB1-213ENST00000539332 USP4Q13107 963 aa8.94□□□□□ -0.98
DDB1-213ENST00000539332 RFTN1Q14699 578 aaPredicted RBP8.94□□□□□ -0.98
DDB1-213ENST00000539332 ZNF77Q15935 545 aa8.94□□□□□ -0.98
DDB1-213ENST00000539332 MARC1Q5VT66 337 aa8.94□□□□□ -0.98
DDB1-213ENST00000539332 TRMT10BQ6PF06 316 aaKnown RBP8.94□□□□□ -0.98
DDB1-213ENST00000539332 RANBP10Q6VN20 620 aa8.94□□□□□ -0.98
DDB1-213ENST00000539332 SDCCAG8Q86SQ7 713 aaPredicted RBP8.94□□□□□ -0.98
DDB1-213ENST00000539332 SLC26A11Q86WA9 606 aa8.94□□□□□ -0.98
DDB1-213ENST00000539332 LRRC6Q86X45 466 aa8.94□□□□□ -0.98
DDB1-213ENST00000539332 PGBD5Q8N414 524 aa8.94□□□□□ -0.98
DDB1-213ENST00000539332 HJURPQ8NCD3 748 aaPredicted RBP8.94□□□□□ -0.98
DDB1-213ENST00000539332 SPATA22Q8NHS9 363 aa8.94□□□□□ -0.98
DDB1-213ENST00000539332 ARRDC2Q8TBH0 407 aa8.94□□□□□ -0.98
DDB1-213ENST00000539332 SMARCD2Q92925 531 aa8.94□□□□□ -0.98
DDB1-213ENST00000539332 SCYL1Q96KG9 808 aa8.94□□□□□ -0.98
DDB1-213ENST00000539332 MRGPRX2Q96LB1 330 aa8.94□□□□□ -0.98
DDB1-213ENST00000539332 RIPOR3Q96MK2 946 aa8.94□□□□□ -0.98
DDB1-213ENST00000539332 ASB16Q96NS5 453 aa8.94□□□□□ -0.98
DDB1-213ENST00000539332 LRRC3BQ96PB8 259 aa8.94□□□□□ -0.98
DDB1-213ENST00000539332 TBL1YQ9BQ87 522 aa8.94□□□□□ -0.98
DDB1-213ENST00000539332 TRIM56Q9BRZ2 755 aaKnown RBP8.94□□□□□ -0.98
DDB1-213ENST00000539332 TUBB6Q9BUF5 446 aa8.94□□□□□ -0.98
DDB1-213ENST00000539332 YIPF3Q9GZM5 350 aa8.94□□□□□ -0.98
DDB1-213ENST00000539332 IL22Q9GZX6 179 aa8.94□□□□□ -0.98
DDB1-213ENST00000539332 BFARQ9NZS9 450 aa8.94□□□□□ -0.98
DDB1-213ENST00000539332 SOX13Q9UN79 622 aa8.94□□□□□ -0.98
DDB1-213ENST00000539332 STK38LQ9Y2H1 464 aa8.94□□□□□ -0.98
DDB1-213ENST00000539332 STARD13Q9Y3M8 1113 aa8.94□□□□□ -0.98
DDB1-213ENST00000539332 MAD1L1Q9Y6D9 718 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms