RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 CALCAP01258 141 aa16.92■□□□□ 0.3
SCARB1-205ENST00000538291 PROCP04070 461 aa16.92■□□□□ 0.3
SCARB1-205ENST00000538291 BRCC3P46736 316 aa16.92■□□□□ 0.3
SCARB1-205ENST00000538291 SQLEQ14534 574 aa16.92■□□□□ 0.3
SCARB1-205ENST00000538291 DUSP28Q4G0W2 176 aa16.92■□□□□ 0.3
SCARB1-205ENST00000538291 FAM124AQ86V42 546 aa16.92■□□□□ 0.3
SCARB1-205ENST00000538291 RBFAQ8N0V3 343 aa16.92■□□□□ 0.3
SCARB1-205ENST00000538291 CPA6Q8N4T0 437 aa16.92■□□□□ 0.3
SCARB1-205ENST00000538291 PIWIL2Q8TC59 973 aaKnown RBP16.92■□□□□ 0.3
SCARB1-205ENST00000538291 CD101Q93033 1021 aa16.92■□□□□ 0.3
SCARB1-205ENST00000538291 NDNQ99608 321 aa16.92■□□□□ 0.3
SCARB1-205ENST00000538291 KLHL25Q9H0H3 589 aa16.92■□□□□ 0.3
SCARB1-205ENST00000538291 MGRN1O60291 552 aa16.92■□□□□ 0.3
SCARB1-205ENST00000538291 FAM153BP0C7A2 387 aa16.92■□□□□ 0.3
SCARB1-205ENST00000538291 AIF1P55008 147 aa16.92■□□□□ 0.3
SCARB1-205ENST00000538291 FAM153CQ494X1 144 aa16.92■□□□□ 0.3
SCARB1-205ENST00000538291 GPRIN3Q6ZVF9 776 aa16.92■□□□□ 0.3
SCARB1-205ENST00000538291 PCDH20Q8N6Y1 951 aaKnown RBP16.92■□□□□ 0.3
SCARB1-205ENST00000538291 MRPL57Q9BQC6 102 aaKnown RBP16.92■□□□□ 0.3
SCARB1-205ENST00000538291 FUCA2Q9BTY2 467 aa16.92■□□□□ 0.3
SCARB1-205ENST00000538291 PCDH12Q9NPG4 1184 aa16.92■□□□□ 0.3
SCARB1-205ENST00000538291 TMPRSS4Q9NRS4 437 aa16.92■□□□□ 0.3
SCARB1-205ENST00000538291 SPATA2Q9UM82 520 aa16.92■□□□□ 0.3
SCARB1-205ENST00000538291 GSTK1Q9Y2Q3 226 aa16.92■□□□□ 0.3
SCARB1-205ENST00000538291 PXDNQ92626 1479 aa16.92■□□□□ 0.3
SCARB1-205ENST00000538291 APODP05090 189 aa16.92■□□□□ 0.3
SCARB1-205ENST00000538291 ITGA2P17301 1181 aa16.92■□□□□ 0.3
SCARB1-205ENST00000538291 RPL4P36578 427 aaKnown RBP16.92■□□□□ 0.3
SCARB1-205ENST00000538291 MAXP61244 160 aa16.92■□□□□ 0.3
SCARB1-205ENST00000538291 NEDD8Q15843 81 aa16.92■□□□□ 0.3
SCARB1-205ENST00000538291 TIMM50Q3ZCQ8 353 aa16.92■□□□□ 0.3
SCARB1-205ENST00000538291 ZACNQ401N2 412 aa16.92■□□□□ 0.3
SCARB1-205ENST00000538291 TCEAL5Q5H9L2 206 aa16.92■□□□□ 0.3
SCARB1-205ENST00000538291 ZNF549Q6P9A3 640 aa16.92■□□□□ 0.3
SCARB1-205ENST00000538291 R3HCC1LQ7Z5L2 792 aaKnown RBP16.92■□□□□ 0.3
SCARB1-205ENST00000538291 POLNQ7Z5Q5 900 aa16.92■□□□□ 0.3
SCARB1-205ENST00000538291 PARGQ86W56 976 aa16.92■□□□□ 0.3
SCARB1-205ENST00000538291 MAB21L3Q8N8X9 362 aa16.92■□□□□ 0.3
SCARB1-205ENST00000538291 GPR156Q8NFN8 814 aa16.92■□□□□ 0.3
SCARB1-205ENST00000538291 OR5B17Q8NGF7 314 aa16.92■□□□□ 0.3
SCARB1-205ENST00000538291 NELL1Q92832 810 aa16.92■□□□□ 0.3
SCARB1-205ENST00000538291 TIFAQ96CG3 184 aa16.92■□□□□ 0.3
SCARB1-205ENST00000538291 PCDHB9Q9Y5E1 797 aa16.92■□□□□ 0.3
SCARB1-205ENST00000538291 SALL3Q9BXA9 1300 aa16.91■□□□□ 0.3
SCARB1-205ENST00000538291 CLDN5O00501 218 aa16.91■□□□□ 0.3
SCARB1-205ENST00000538291 GRM6O15303 877 aa16.91■□□□□ 0.3
SCARB1-205ENST00000538291 ERAL1O75616 437 aaKnown RBP16.91■□□□□ 0.3
SCARB1-205ENST00000538291 EEF1DP3Q658K8 133 aa16.91■□□□□ 0.3
SCARB1-205ENST00000538291 VGLL2Q8N8G2 317 aa16.91■□□□□ 0.3
SCARB1-205ENST00000538291 ZNF248Q8NDW4 579 aa16.91■□□□□ 0.3
SCARB1-205ENST00000538291 NMD3Q96D46 503 aaKnown RBP16.91■□□□□ 0.3
SCARB1-205ENST00000538291 SLC4A5Q9BY07 1137 aa16.91■□□□□ 0.3
SCARB1-205ENST00000538291 ACP6Q9NPH0 428 aa16.91■□□□□ 0.3
SCARB1-205ENST00000538291 TBC1D14Q9P2M4 693 aa16.91■□□□□ 0.3
SCARB1-205ENST00000538291 TMEM88BA6NKF7 163 aa16.91■□□□□ 0.3
SCARB1-205ENST00000538291 TNFAIP8O95379 198 aa16.91■□□□□ 0.3
SCARB1-205ENST00000538291 IL6P05231 212 aa16.91■□□□□ 0.3
SCARB1-205ENST00000538291 PIRTP0C851 137 aa16.91■□□□□ 0.3
SCARB1-205ENST00000538291 GPR158Q5T848 1215 aa16.91■□□□□ 0.3
SCARB1-205ENST00000538291 IL31RAQ8NI17 732 aa16.91■□□□□ 0.3
SCARB1-205ENST00000538291 SHC3Q92529 594 aa16.91■□□□□ 0.3
SCARB1-205ENST00000538291 CXorf56Q9H5V9 222 aa16.91■□□□□ 0.3
SCARB1-205ENST00000538291 ZFP14Q9HCL3 533 aa16.91■□□□□ 0.3
SCARB1-205ENST00000538291 NEDD8-MDP1E9PL57 170 aa16.91■□□□□ 0.3
SCARB1-205ENST00000538291 TSC22D2O75157 780 aa16.91■□□□□ 0.3
SCARB1-205ENST00000538291 CCNDBP1O95273 360 aa16.91■□□□□ 0.3
SCARB1-205ENST00000538291 ECDO95905 644 aaPredicted RBP16.91■□□□□ 0.3
SCARB1-205ENST00000538291 ITGAVP06756 1048 aa16.91■□□□□ 0.3
SCARB1-205ENST00000538291 RPL38P63173 70 aaKnown RBP16.91■□□□□ 0.3
SCARB1-205ENST00000538291 FAM110CQ1W6H9 321 aa16.91■□□□□ 0.3
SCARB1-205ENST00000538291 PMF1Q6P1K2 205 aa16.91■□□□□ 0.3
SCARB1-205ENST00000538291 BBS12Q6ZW61 710 aa16.91■□□□□ 0.3
SCARB1-205ENST00000538291 PEG10Q86TG7 708 aaKnown RBP16.91■□□□□ 0.3
SCARB1-205ENST00000538291 FCRL2Q96LA5 508 aaPredicted RBP16.91■□□□□ 0.3
SCARB1-205ENST00000538291 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.91■□□□□ 0.3
SCARB1-205ENST00000538291 CFAP97Q9P2B7 532 aa16.91■□□□□ 0.3
SCARB1-205ENST00000538291 VPS4AQ9UN37 437 aa16.91■□□□□ 0.3
SCARB1-205ENST00000538291 SORCS3Q9UPU3 1222 aa16.91■□□□□ 0.3
SCARB1-205ENST00000538291 EFCAB10A6NFE3 127 aa16.91■□□□□ 0.3
SCARB1-205ENST00000538291 TMEM191CA6NGB0 347 aa16.91■□□□□ 0.3
SCARB1-205ENST00000538291 SNUPNO95149 360 aaKnown RBP16.91■□□□□ 0.3
SCARB1-205ENST00000538291 IDH2P48735 452 aaKnown RBP16.91■□□□□ 0.3
SCARB1-205ENST00000538291 PKNOX1P55347 436 aa16.91■□□□□ 0.3
SCARB1-205ENST00000538291 GALNT3Q14435 633 aa16.91■□□□□ 0.3
SCARB1-205ENST00000538291 KIAA0408Q6ZU52 694 aa16.91■□□□□ 0.3
SCARB1-205ENST00000538291 SH3RF1Q7Z6J0 888 aa16.91■□□□□ 0.3
SCARB1-205ENST00000538291 OR4L1Q8NH43 312 aa16.91■□□□□ 0.3
SCARB1-205ENST00000538291 CYLDQ9NQC7 956 aa16.91■□□□□ 0.3
SCARB1-205ENST00000538291 YDJCA8MPS7 323 aa16.9■□□□□ 0.3
SCARB1-205ENST00000538291 SELPP16109 830 aa16.9■□□□□ 0.3
SCARB1-205ENST00000538291 CDYL2Q8N8U2 506 aa16.9■□□□□ 0.3
SCARB1-205ENST00000538291 HDAC7Q8WUI4 952 aa16.9■□□□□ 0.3
SCARB1-205ENST00000538291 ZBTB10Q96DT7 871 aa16.9■□□□□ 0.3
SCARB1-205ENST00000538291 DEC1Q9P2X7 70 aa16.9■□□□□ 0.3
SCARB1-205ENST00000538291 LRRIQ1Q96JM4 1722 aa16.9■□□□□ 0.3
SCARB1-205ENST00000538291 WWP2O00308 870 aa16.9■□□□□ 0.3
SCARB1-205ENST00000538291 TBX2Q13207 712 aaPredicted RBP16.9■□□□□ 0.3
SCARB1-205ENST00000538291 LSM12Q3MHD2 195 aaKnown RBP16.9■□□□□ 0.3
SCARB1-205ENST00000538291 SPANXN2Q5MJ10 180 aa16.9■□□□□ 0.3
SCARB1-205ENST00000538291 PIWIL4Q7Z3Z4 852 aaKnown RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms