RNA–Protein interactions for RNA: ENST00000537120.5

DDB1-208, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,215 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-208ENST00000537120 C1orf61Q13536 156 aa8.47□□□□□ -1.05
DDB1-208ENST00000537120 CAMK2BQ13554 666 aa8.47□□□□□ -1.05
DDB1-208ENST00000537120 NR1I3Q14994 352 aa8.47□□□□□ -1.05
DDB1-208ENST00000537120 LRRC14Q15048 493 aa8.47□□□□□ -1.05
DDB1-208ENST00000537120 CA9Q16790 459 aa8.47□□□□□ -1.05
DDB1-208ENST00000537120 COL28A1Q2UY09 1125 aa8.47□□□□□ -1.05
DDB1-208ENST00000537120 PRRT3Q5FWE3 981 aa8.47□□□□□ -1.05
DDB1-208ENST00000537120 RFX8Q6ZV50 586 aa8.47□□□□□ -1.05
DDB1-208ENST00000537120 KANSL1Q7Z3B3 1105 aa8.47□□□□□ -1.05
DDB1-208ENST00000537120 CAMK1DQ8IU85 385 aa8.47□□□□□ -1.05
DDB1-208ENST00000537120 HID1Q8IV36 788 aa8.47□□□□□ -1.05
DDB1-208ENST00000537120 SLC22A18ASQ8N1D0 253 aa8.47□□□□□ -1.05
DDB1-208ENST00000537120 MAPK15Q8TD08 544 aa8.47□□□□□ -1.05
DDB1-208ENST00000537120 HCAR2Q8TDS4 363 aa8.47□□□□□ -1.05
DDB1-208ENST00000537120 NSMCE1Q8WV22 266 aa8.47□□□□□ -1.05
DDB1-208ENST00000537120 ZNF641Q96N77 438 aaPredicted RBP8.47□□□□□ -1.05
DDB1-208ENST00000537120 KCTD15Q96SI1 283 aaPredicted RBP8.47□□□□□ -1.05
DDB1-208ENST00000537120 SNRNP25Q9BV90 132 aaKnown RBP8.47□□□□□ -1.05
DDB1-208ENST00000537120 ATP13A3Q9H7F0 1226 aa8.47□□□□□ -1.05
DDB1-208ENST00000537120 ZWILCHQ9H900 591 aa8.47□□□□□ -1.05
DDB1-208ENST00000537120 DKK3Q9UBP4 350 aa8.47□□□□□ -1.05
DDB1-208ENST00000537120 GULP1Q9UBP9 304 aa8.47□□□□□ -1.05
DDB1-208ENST00000537120 BZW2Q9Y6E2 419 aaKnown RBP8.47□□□□□ -1.05
DDB1-208ENST00000537120 CSNK1G3Q9Y6M4 447 aa8.47□□□□□ -1.05
DDB1-208ENST00000537120 A0A1B0GTH6 734 aa8.46□□□□□ -1.06
DDB1-208ENST00000537120 SYCE3A1L190 88 aa8.46□□□□□ -1.06
DDB1-208ENST00000537120 DDX3XO00571 662 aaKnown RBP eCLIP8.46□□□□□ -1.062e-22■■■■□ 23.7
DDB1-208ENST00000537120 AREL1O15033 823 aa8.46□□□□□ -1.06
DDB1-208ENST00000537120 OPA1O60313 960 aa8.46□□□□□ -1.06
DDB1-208ENST00000537120 NME1P15531 152 aaKnown RBP8.46□□□□□ -1.06
DDB1-208ENST00000537120 ACTN2P35609 894 aa8.46□□□□□ -1.06
DDB1-208ENST00000537120 PRKCIP41743 596 aa8.46□□□□□ -1.06
DDB1-208ENST00000537120 LIG3P49916 1009 aa8.46□□□□□ -1.06
DDB1-208ENST00000537120 SCNN1BP51168 640 aa8.46□□□□□ -1.06
DDB1-208ENST00000537120 ZNF135P52742 658 aaPredicted RBP8.46□□□□□ -1.06
DDB1-208ENST00000537120 FANCCQ00597 558 aa8.46□□□□□ -1.06
DDB1-208ENST00000537120 INSM1Q01101 510 aaPredicted RBP8.46□□□□□ -1.06
DDB1-208ENST00000537120 KRT81Q14533 505 aa8.46□□□□□ -1.06
DDB1-208ENST00000537120 NR0B2Q15466 257 aa8.46□□□□□ -1.06
DDB1-208ENST00000537120 CDKN3Q16667 212 aa8.46□□□□□ -1.06
DDB1-208ENST00000537120 UGP2Q16851 508 aa8.46□□□□□ -1.06
DDB1-208ENST00000537120 DEFB133Q30KQ1 61 aa8.46□□□□□ -1.06
DDB1-208ENST00000537120 TMEM52BQ4KMG9 183 aa8.46□□□□□ -1.06
DDB1-208ENST00000537120 BOLA3Q53S33 107 aa8.46□□□□□ -1.06
DDB1-208ENST00000537120 ESRP1Q6NXG1 681 aaKnown RBP8.46□□□□□ -1.06
DDB1-208ENST00000537120 ZCCHC8Q6NZY4 707 aaKnown RBP8.46□□□□□ -1.06
DDB1-208ENST00000537120 BRAT1Q6PJG6 821 aa8.46□□□□□ -1.06
DDB1-208ENST00000537120 ENPP7Q6UWV6 458 aa8.46□□□□□ -1.06
DDB1-208ENST00000537120 EFL1Q7Z2Z2 1120 aaKnown RBP8.46□□□□□ -1.06
DDB1-208ENST00000537120 PDZD3Q86UT5 571 aa8.46□□□□□ -1.06
DDB1-208ENST00000537120 PSTKQ8IV42 348 aaKnown RBP8.46□□□□□ -1.06
DDB1-208ENST00000537120 PHACTR4Q8IZ21 702 aa8.46□□□□□ -1.06
DDB1-208ENST00000537120 BBS5Q8N3I7 341 aa8.46□□□□□ -1.06
DDB1-208ENST00000537120 LZTR1Q8N653 840 aa8.46□□□□□ -1.06
DDB1-208ENST00000537120 ZNF548Q8NEK5 533 aaPredicted RBP8.46□□□□□ -1.06
DDB1-208ENST00000537120 ATL2Q8NHH9 583 aa8.46□□□□□ -1.06
DDB1-208ENST00000537120 IFI44Q8TCB0 444 aa8.46□□□□□ -1.06
DDB1-208ENST00000537120 PDCD6IPQ8WUM4 868 aaKnown RBP8.46□□□□□ -1.06
DDB1-208ENST00000537120 HSPH1Q92598 858 aa8.46□□□□□ -1.06
DDB1-208ENST00000537120 CENPTQ96BT3 561 aa8.46□□□□□ -1.06
DDB1-208ENST00000537120 DEPDC7Q96QD5 511 aa8.46□□□□□ -1.06
DDB1-208ENST00000537120 TUBGCP5Q96RT8 1024 aa8.46□□□□□ -1.06
DDB1-208ENST00000537120 KLF6Q99612 283 aaPredicted RBP8.46□□□□□ -1.06
DDB1-208ENST00000537120 NRSN2Q9GZP1 204 aa8.46□□□□□ -1.06
DDB1-208ENST00000537120 SYNDIG1Q9H7V2 258 aa8.46□□□□□ -1.06
DDB1-208ENST00000537120 USP29Q9HBJ7 922 aa8.46□□□□□ -1.06
DDB1-208ENST00000537120 PCDH12Q9NPG4 1184 aa8.46□□□□□ -1.06
DDB1-208ENST00000537120 MBNL1Q9NR56 388 aaKnown RBP8.46□□□□□ -1.06
DDB1-208ENST00000537120 WDR70Q9NW82 654 aa8.46□□□□□ -1.06
DDB1-208ENST00000537120 LHX3Q9UBR4 397 aa8.46□□□□□ -1.06
DDB1-208ENST00000537120 DKK4Q9UBT3 224 aa8.46□□□□□ -1.06
DDB1-208ENST00000537120 SEPT3Q9UH03 358 aa8.46□□□□□ -1.06
DDB1-208ENST00000537120 APOBEC3BQ9UH17 382 aaKnown RBP8.46□□□□□ -1.06
DDB1-208ENST00000537120 IP6K2Q9UHH9 426 aa8.46□□□□□ -1.06
DDB1-208ENST00000537120 MOSPD1Q9UJG1 213 aa8.46□□□□□ -1.06
DDB1-208ENST00000537120 NEU3Q9UQ49 428 aa8.46□□□□□ -1.06
DDB1-208ENST00000537120 COQ6Q9Y2Z9 468 aa8.46□□□□□ -1.06
DDB1-208ENST00000537120 GPSM3Q9Y4H4 160 aa8.46□□□□□ -1.06
DDB1-208ENST00000537120 ASXL3Q9C0F0 2248 aa8.46□□□□□ -1.06
DDB1-208ENST00000537120 ASPMQ8IZT6 3477 aa8.46□□□□□ -1.06
DDB1-208ENST00000537120 DMXL2Q8TDJ6 3036 aa8.46□□□□□ -1.06
DDB1-208ENST00000537120 COL5A1P20908 1838 aaPredicted RBP8.45□□□□□ -1.06
DDB1-208ENST00000537120 A8MX80 341 aa8.45□□□□□ -1.06
DDB1-208ENST00000537120 TOR1BO14657 336 aa8.45□□□□□ -1.06
DDB1-208ENST00000537120 TPP1O14773 563 aa8.45□□□□□ -1.06
DDB1-208ENST00000537120 MUSKO15146 869 aa8.45□□□□□ -1.06
DDB1-208ENST00000537120 SPINT1O43278 529 aa8.45□□□□□ -1.06
DDB1-208ENST00000537120 BUB1BO60566 1050 aaPredicted RBP8.45□□□□□ -1.06
DDB1-208ENST00000537120 USP12O75317 370 aa8.45□□□□□ -1.06
DDB1-208ENST00000537120 TNFP01375 233 aa8.45□□□□□ -1.06
DDB1-208ENST00000537120 PRKCGP05129 697 aa8.45□□□□□ -1.06
DDB1-208ENST00000537120 TPM3P06753 285 aa8.45□□□□□ -1.06
DDB1-208ENST00000537120 AMPD1P23109 780 aa8.45□□□□□ -1.06
DDB1-208ENST00000537120 NFKBIAP25963 317 aa8.45□□□□□ -1.06
DDB1-208ENST00000537120 CSNK1DP48730 415 aa8.45□□□□□ -1.06
DDB1-208ENST00000537120 HCAR3P49019 387 aa8.45□□□□□ -1.06
DDB1-208ENST00000537120 PEX5P50542 639 aa8.45□□□□□ -1.06
DDB1-208ENST00000537120 PFN3P60673 137 aa8.45□□□□□ -1.06
DDB1-208ENST00000537120 IL10RBQ08334 325 aa8.45□□□□□ -1.06
DDB1-208ENST00000537120 ITKQ08881 620 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms