RNA–Protein interactions for RNA: ENST00000533643.1

COMMD9-208, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-208ENST00000533643 ITGB7P26010 798 aa12.01□□□□□ -0.49
COMMD9-208ENST00000533643 CDK18Q07002 472 aa12.01□□□□□ -0.49
COMMD9-208ENST00000533643 CNTN1Q12860 1018 aa12.01□□□□□ -0.49
COMMD9-208ENST00000533643 ARMC12Q5T9G4 340 aa12.01□□□□□ -0.49
COMMD9-208ENST00000533643 RANBP10Q6VN20 620 aa12.01□□□□□ -0.49
COMMD9-208ENST00000533643 AADATQ8N5Z0 425 aa12.01□□□□□ -0.49
COMMD9-208ENST00000533643 TSTD1Q8NFU3 115 aa12.01□□□□□ -0.49
COMMD9-208ENST00000533643 PDCD6IPQ8WUM4 868 aaKnown RBP12.01□□□□□ -0.49
COMMD9-208ENST00000533643 HMGB4Q8WW32 186 aa12.01□□□□□ -0.49
COMMD9-208ENST00000533643 PIH1D2Q8WWB5 315 aa12.01□□□□□ -0.49
COMMD9-208ENST00000533643 SPOCK2Q92563 424 aa12.01□□□□□ -0.49
COMMD9-208ENST00000533643 PRCCQ92733 491 aaPredicted RBP12.01□□□□□ -0.49
COMMD9-208ENST00000533643 SNF8Q96H20 258 aa12.01□□□□□ -0.49
COMMD9-208ENST00000533643 FEM1CQ96JP0 617 aa12.01□□□□□ -0.49
COMMD9-208ENST00000533643 TBL1YQ9BQ87 522 aa12.01□□□□□ -0.49
COMMD9-208ENST00000533643 DPH5Q9H2P9 285 aa12.01□□□□□ -0.49
COMMD9-208ENST00000533643 PABPC3Q9H361 631 aaKnown RBP12.01□□□□□ -0.49
COMMD9-208ENST00000533643 LRRC40Q9H9A6 602 aa12.01□□□□□ -0.49
COMMD9-208ENST00000533643 C11orf16Q9NQ32 467 aa12.01□□□□□ -0.49
COMMD9-208ENST00000533643 SPATA6Q9NWH7 488 aaPredicted RBP12.01□□□□□ -0.49
COMMD9-208ENST00000533643 GOLGA6AQ9NYA3 693 aa12.01□□□□□ -0.49
COMMD9-208ENST00000533643 DMGDHQ9UI17 866 aaKnown RBP12.01□□□□□ -0.49
COMMD9-208ENST00000533643 TPX2Q9ULW0 747 aaKnown RBP12.01□□□□□ -0.49
COMMD9-208ENST00000533643 SNX24Q9Y343 169 aa12.01□□□□□ -0.49
COMMD9-208ENST00000533643 UTP11Q9Y3A2 253 aaKnown RBP12.01□□□□□ -0.49
COMMD9-208ENST00000533643 ARIH1Q9Y4X5 557 aaPredicted RBP12.01□□□□□ -0.49
COMMD9-208ENST00000533643 PCDHB9Q9Y5E1 797 aa12.01□□□□□ -0.49
COMMD9-208ENST00000533643 ERI2A8K979 691 aaKnown RBP12□□□□□ -0.49
COMMD9-208ENST00000533643 K7ESF4 209 aa12□□□□□ -0.49
COMMD9-208ENST00000533643 TP73O15350 636 aa12□□□□□ -0.49
COMMD9-208ENST00000533643 USP12O75317 370 aa12□□□□□ -0.49
COMMD9-208ENST00000533643 ALDH1A2O94788 518 aa12□□□□□ -0.49
COMMD9-208ENST00000533643 SEC31AO94979 1220 aaKnown RBP12□□□□□ -0.49
COMMD9-208ENST00000533643 HEXIM1O94992 359 aaKnown RBP12□□□□□ -0.49
COMMD9-208ENST00000533643 NDST3O95803 873 aa12□□□□□ -0.49
COMMD9-208ENST00000533643 CPP00450 1065 aa12□□□□□ -0.49
COMMD9-208ENST00000533643 ATXN1LP0C7T5 689 aaKnown RBP12□□□□□ -0.49
COMMD9-208ENST00000533643 TPSB2P20231 275 aa12□□□□□ -0.49
COMMD9-208ENST00000533643 CA4P22748 312 aa12□□□□□ -0.49
COMMD9-208ENST00000533643 DRD3P35462 400 aa12□□□□□ -0.49
COMMD9-208ENST00000533643 CHRNA4P43681 627 aa12□□□□□ -0.49
COMMD9-208ENST00000533643 LMAN1P49257 510 aa12□□□□□ -0.49
COMMD9-208ENST00000533643 CCR3P51677 355 aa12□□□□□ -0.49
COMMD9-208ENST00000533643 RPL26P61254 145 aaKnown RBP12□□□□□ -0.49
COMMD9-208ENST00000533643 CDK16Q00536 496 aa12□□□□□ -0.49
COMMD9-208ENST00000533643 ZBTB16Q05516 673 aa12□□□□□ -0.49
COMMD9-208ENST00000533643 GALNT3Q14435 633 aa12□□□□□ -0.49
COMMD9-208ENST00000533643 TRADDQ15628 312 aa12□□□□□ -0.49
COMMD9-208ENST00000533643 TPSAB1Q15661 275 aa12□□□□□ -0.49
COMMD9-208ENST00000533643 SIRPB2Q5JXA9 342 aa12□□□□□ -0.49
COMMD9-208ENST00000533643 TEX35Q5T0J7 233 aa12□□□□□ -0.49
COMMD9-208ENST00000533643 RNASEH2BQ5TBB1 312 aaKnown RBP12□□□□□ -0.49
COMMD9-208ENST00000533643 IZUMO3Q5VZ72 239 aa12□□□□□ -0.49
COMMD9-208ENST00000533643 DENND5AQ6IQ26 1287 aa12□□□□□ -0.49
COMMD9-208ENST00000533643 ANO7Q6IWH7 933 aa12□□□□□ -0.49
COMMD9-208ENST00000533643 BRAT1Q6PJG6 821 aa12□□□□□ -0.49
COMMD9-208ENST00000533643 KIAA1324Q6UXG2 1013 aaKnown RBP12□□□□□ -0.49
COMMD9-208ENST00000533643 PARS2Q7L3T8 475 aaKnown RBP12□□□□□ -0.49
COMMD9-208ENST00000533643 PPIL6Q8IXY8 311 aa12□□□□□ -0.49
COMMD9-208ENST00000533643 HDDC3Q8N4P3 179 aa12□□□□□ -0.49
COMMD9-208ENST00000533643 SLC25A41Q8N5S1 370 aa12□□□□□ -0.49
COMMD9-208ENST00000533643 CAMKK1Q8N5S9 505 aa12□□□□□ -0.49
COMMD9-208ENST00000533643 NAT8LQ8N9F0 302 aa12□□□□□ -0.49
COMMD9-208ENST00000533643 DTWD2Q8NBA8 298 aa12□□□□□ -0.49
COMMD9-208ENST00000533643 SEC14L1Q92503 715 aa12□□□□□ -0.49
COMMD9-208ENST00000533643 IFT43Q96FT9 208 aa12□□□□□ -0.49
COMMD9-208ENST00000533643 PPP1R16AQ96I34 528 aa12□□□□□ -0.49
COMMD9-208ENST00000533643 SMIM14Q96QK8 99 aa12□□□□□ -0.49
COMMD9-208ENST00000533643 APOL2Q9BQE5 337 aa12□□□□□ -0.49
COMMD9-208ENST00000533643 HDAC8Q9BY41 377 aa12□□□□□ -0.49
COMMD9-208ENST00000533643 RAB17Q9H0T7 212 aa12□□□□□ -0.49
COMMD9-208ENST00000533643 EIF2B3Q9NR50 452 aaKnown RBP12□□□□□ -0.49
COMMD9-208ENST00000533643 SERGEFQ9UGK8 458 aa12□□□□□ -0.49
COMMD9-208ENST00000533643 EBF1Q9UH73 591 aa12□□□□□ -0.49
COMMD9-208ENST00000533643 PHTF1Q9UMS5 762 aa12□□□□□ -0.49
COMMD9-208ENST00000533643 RPL26L1Q9UNX3 145 aaKnown RBP12□□□□□ -0.49
COMMD9-208ENST00000533643 A0A1W2PQ67 120 aa11.99□□□□□ -0.49
COMMD9-208ENST00000533643 ANKRD66B4E2M5 251 aa11.99□□□□□ -0.49
COMMD9-208ENST00000533643 TMEM63AO94886 807 aa11.99□□□□□ -0.49
COMMD9-208ENST00000533643 DNTTP04053 509 aa11.99□□□□□ -0.49
COMMD9-208ENST00000533643 RHOXF2BP0C7M4 288 aa11.99□□□□□ -0.49
COMMD9-208ENST00000533643 TDGF1P13385 188 aa11.99□□□□□ -0.49
COMMD9-208ENST00000533643 ITIH2P19823 946 aa11.99□□□□□ -0.49
COMMD9-208ENST00000533643 HLA-DPA1P20036 260 aa11.99□□□□□ -0.49
COMMD9-208ENST00000533643 AVPR2P30518 371 aa11.99□□□□□ -0.49
COMMD9-208ENST00000533643 P2RY2P41231 377 aa11.99□□□□□ -0.49
COMMD9-208ENST00000533643 GRIA1P42261 906 aa11.99□□□□□ -0.49
COMMD9-208ENST00000533643 PXNP49023 591 aaPredicted RBP11.99□□□□□ -0.49
COMMD9-208ENST00000533643 ITGA8P53708 1063 aa11.99□□□□□ -0.49
COMMD9-208ENST00000533643 DRG2P55039 364 aaKnown RBP11.99□□□□□ -0.49
COMMD9-208ENST00000533643 POLR2LP62875 67 aaKnown RBP11.99□□□□□ -0.49
COMMD9-208ENST00000533643 GUCY2DQ02846 1103 aa11.99□□□□□ -0.49
COMMD9-208ENST00000533643 PTPRRQ15256 657 aa11.99□□□□□ -0.49
COMMD9-208ENST00000533643 SLC1A5Q15758 541 aa11.99□□□□□ -0.49
COMMD9-208ENST00000533643 QPCTQ16769 361 aa11.99□□□□□ -0.49
COMMD9-208ENST00000533643 UGP2Q16851 508 aa11.99□□□□□ -0.49
COMMD9-208ENST00000533643 CFAP58Q5T655 872 aa11.99□□□□□ -0.49
COMMD9-208ENST00000533643 PIP5KL1Q5T9C9 394 aa11.99□□□□□ -0.49
COMMD9-208ENST00000533643 CCDC70Q6NSX1 233 aa11.99□□□□□ -0.49
COMMD9-208ENST00000533643 ERN2Q76MJ5 926 aaKnown RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms