RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 TMPRSS3P57727 454 aa8.84□□□□□ -0.99
COPB1-210ENST00000533533 ERVPABLB-1P60509 514 aa8.84□□□□□ -0.99
COPB1-210ENST00000533533 GABREP78334 506 aa8.84□□□□□ -0.99
COPB1-210ENST00000533533 RHDQ02161 417 aa8.84□□□□□ -0.99
COPB1-210ENST00000533533 NRG1Q02297 640 aaPredicted RBP8.84□□□□□ -0.99
COPB1-210ENST00000533533 GNA12Q03113 381 aa8.84□□□□□ -0.99
COPB1-210ENST00000533533 POLD3Q15054 466 aaPredicted RBP8.84□□□□□ -0.99
COPB1-210ENST00000533533 TAF1BQ53T94 588 aaPredicted RBP8.84□□□□□ -0.99
COPB1-210ENST00000533533 BROXQ5VW32 411 aa8.84□□□□□ -0.99
COPB1-210ENST00000533533 LINGO4Q6UY18 593 aa8.84□□□□□ -0.99
COPB1-210ENST00000533533 ABI3BPQ7Z7G0 1075 aa8.84□□□□□ -0.99
COPB1-210ENST00000533533 TMTC1Q8IUR5 882 aa8.84□□□□□ -0.99
COPB1-210ENST00000533533 RHOT2Q8IXI1 618 aa8.84□□□□□ -0.99
COPB1-210ENST00000533533 CCDC170Q8IYT3 715 aa8.84□□□□□ -0.99
COPB1-210ENST00000533533 COL27A1Q8IZC6 1860 aaPredicted RBP8.84□□□□□ -0.99
COPB1-210ENST00000533533 SLC22A18ASQ8N1D0 253 aa8.84□□□□□ -0.99
COPB1-210ENST00000533533 ARFGAP1Q8N6T3 406 aa8.84□□□□□ -0.99
COPB1-210ENST00000533533 FAM181AQ8N9Y4 354 aa8.84□□□□□ -0.99
COPB1-210ENST00000533533 TMIEQ8NEW7 156 aa8.84□□□□□ -0.99
COPB1-210ENST00000533533 OR13H1Q8NG92 308 aa8.84□□□□□ -0.99
COPB1-210ENST00000533533 OR2A12Q8NGT7 310 aa8.84□□□□□ -0.99
COPB1-210ENST00000533533 SLC35G2Q8TBE7 412 aa8.84□□□□□ -0.99
COPB1-210ENST00000533533 IFT43Q96FT9 208 aa8.84□□□□□ -0.99
COPB1-210ENST00000533533 WBP1Q96G27 269 aa8.84□□□□□ -0.99
COPB1-210ENST00000533533 APOLD1Q96LR9 279 aa8.84□□□□□ -0.99
COPB1-210ENST00000533533 CCDC114Q96M63 670 aa8.84□□□□□ -0.99
COPB1-210ENST00000533533 DEPDC7Q96QD5 511 aa8.84□□□□□ -0.99
COPB1-210ENST00000533533 KCTD15Q96SI1 283 aaPredicted RBP8.84□□□□□ -0.99
COPB1-210ENST00000533533 BAG1Q99933 345 aaPredicted RBP8.84□□□□□ -0.99
COPB1-210ENST00000533533 DUSP23Q9BVJ7 150 aa8.84□□□□□ -0.99
COPB1-210ENST00000533533 CALN1Q9BXU9 219 aa8.84□□□□□ -0.99
COPB1-210ENST00000533533 CAAP1Q9H8G2 361 aa8.84□□□□□ -0.99
COPB1-210ENST00000533533 POLR1BQ9H9Y6 1135 aa8.84□□□□□ -0.99
COPB1-210ENST00000533533 USP29Q9HBJ7 922 aa8.84□□□□□ -0.99
COPB1-210ENST00000533533 FZD3Q9NPG1 666 aa8.84□□□□□ -0.99
COPB1-210ENST00000533533 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.84□□□□□ -0.99
COPB1-210ENST00000533533 NDFIP2Q9NV92 336 aa8.84□□□□□ -0.99
COPB1-210ENST00000533533 TMEM248Q9NWD8 314 aa8.84□□□□□ -0.99
COPB1-210ENST00000533533 NLGN3Q9NZ94 848 aa8.84□□□□□ -0.99
COPB1-210ENST00000533533 IMPACTQ9P2X3 320 aa8.84□□□□□ -0.99
COPB1-210ENST00000533533 HPCAL4Q9UM19 191 aa8.84□□□□□ -0.99
COPB1-210ENST00000533533 NENFQ9UMX5 172 aa8.84□□□□□ -0.99
COPB1-210ENST00000533533 PCDHA13Q9Y5I0 950 aa8.84□□□□□ -0.99
COPB1-210ENST00000533533 U3KQA8 63 aa8.84□□□□□ -0.99
COPB1-210ENST00000533533 FLNCQ14315 2725 aa8.84□□□□□ -0.99
COPB1-210ENST00000533533 DOPEY2Q9Y3R5 2298 aa8.84□□□□□ -0.99
COPB1-210ENST00000533533 CHD5Q8TDI0 1954 aa8.84□□□□□ -0.99
COPB1-210ENST00000533533 H3BRJ5 948 aa8.83□□□□□ -1
COPB1-210ENST00000533533 J3QKU1 62 aa8.83□□□□□ -1
COPB1-210ENST00000533533 K7ERQ8 282 aa8.83□□□□□ -1
COPB1-210ENST00000533533 SCAMP1O15126 338 aa8.83□□□□□ -1
COPB1-210ENST00000533533 FGF10O15520 208 aaPredicted RBP8.83□□□□□ -1
COPB1-210ENST00000533533 SMAD6O43541 496 aaKnown RBP8.83□□□□□ -1
COPB1-210ENST00000533533 CSO75390 466 aaKnown RBP8.83□□□□□ -1
COPB1-210ENST00000533533 PROSCO94903 275 aa8.83□□□□□ -1
COPB1-210ENST00000533533 PCDH8O95206 1070 aa8.83□□□□□ -1
COPB1-210ENST00000533533 NDUFA10O95299 355 aa8.83□□□□□ -1
COPB1-210ENST00000533533 PRNPP04156 253 aa8.83□□□□□ -1
COPB1-210ENST00000533533 RARAP10276 462 aa8.83□□□□□ -1
COPB1-210ENST00000533533 MYF5P13349 255 aa8.83□□□□□ -1
COPB1-210ENST00000533533 IL1R2P27930 398 aa8.83□□□□□ -1
COPB1-210ENST00000533533 ETFBP38117 255 aa8.83□□□□□ -1
COPB1-210ENST00000533533 DUSP3P51452 185 aaPredicted RBP8.83□□□□□ -1
COPB1-210ENST00000533533 CDH6P55285 790 aa8.83□□□□□ -1
COPB1-210ENST00000533533 CLDN2P57739 230 aa8.83□□□□□ -1
COPB1-210ENST00000533533 HNRNPKP61978 463 aaKnown RBP eCLIP8.83□□□□□ -1
COPB1-210ENST00000533533 TMEM259Q4ZIN3 620 aa8.83□□□□□ -1
COPB1-210ENST00000533533 BOLA3Q53S33 107 aa8.83□□□□□ -1
COPB1-210ENST00000533533 ODF2Q5BJF6 829 aa8.83□□□□□ -1
COPB1-210ENST00000533533 ZNF542PQ5EBM4 170 aa8.83□□□□□ -1
COPB1-210ENST00000533533 ARHGAP40Q5TG30 622 aa8.83□□□□□ -1
COPB1-210ENST00000533533 MANEALQ5VSG8 457 aa8.83□□□□□ -1
COPB1-210ENST00000533533 SEL1L3Q68CR1 1132 aa8.83□□□□□ -1
COPB1-210ENST00000533533 RETSATQ6NUM9 610 aa8.83□□□□□ -1
COPB1-210ENST00000533533 LEKR1Q6ZMV7 388 aa8.83□□□□□ -1
COPB1-210ENST00000533533 GCNT7Q6ZNI0 430 aa8.83□□□□□ -1
COPB1-210ENST00000533533 Q6ZSR6 202 aa8.83□□□□□ -1
COPB1-210ENST00000533533 ERN2Q76MJ5 926 aaKnown RBP8.83□□□□□ -1
COPB1-210ENST00000533533 KIAA1328Q86T90 577 aa8.83□□□□□ -1
COPB1-210ENST00000533533 CPNE8Q86YQ8 564 aa8.83□□□□□ -1
COPB1-210ENST00000533533 DCP2Q8IU60 420 aaKnown RBP8.83□□□□□ -1
COPB1-210ENST00000533533 RYBPQ8N488 228 aaPredicted RBP8.83□□□□□ -1
COPB1-210ENST00000533533 RTL3Q8N8U3 475 aaKnown RBP8.83□□□□□ -1
COPB1-210ENST00000533533 DCAF4L2Q8NA75 395 aa8.83□□□□□ -1
COPB1-210ENST00000533533 FAM174AQ8TBP5 190 aa8.83□□□□□ -1
COPB1-210ENST00000533533 KCNE4Q8WWG9 221 aa8.83□□□□□ -1
COPB1-210ENST00000533533 ARRDC3Q96B67 414 aa8.83□□□□□ -1
COPB1-210ENST00000533533 CELF6Q96J87 481 aaKnown RBP8.83□□□□□ -1
COPB1-210ENST00000533533 PSMB7Q99436 277 aa8.83□□□□□ -1
COPB1-210ENST00000533533 HDAC8Q9BY41 377 aa8.83□□□□□ -1
COPB1-210ENST00000533533 ABCG4Q9H172 646 aa8.83□□□□□ -1
COPB1-210ENST00000533533 CPNE5Q9HCH3 593 aa8.83□□□□□ -1
COPB1-210ENST00000533533 ASCL3Q9NQ33 180 aa8.83□□□□□ -1
COPB1-210ENST00000533533 DYRK4Q9NR20 520 aa8.83□□□□□ -1
COPB1-210ENST00000533533 THSD1Q9NS62 852 aa8.83□□□□□ -1
COPB1-210ENST00000533533 GPR27Q9NS67 375 aa8.83□□□□□ -1
COPB1-210ENST00000533533 EVA1BQ9NVM1 165 aa8.83□□□□□ -1
COPB1-210ENST00000533533 DNAJC28Q9NX36 388 aa8.83□□□□□ -1
COPB1-210ENST00000533533 VPS51Q9UID3 782 aa8.83□□□□□ -1
COPB1-210ENST00000533533 TFR2Q9UP52 801 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms