RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 ITGA2BP08514 1039 aa4.38□□□□□ -1.71
PTPRK-220ENST00000531466 CD72P21854 359 aa4.38□□□□□ -1.71
PTPRK-220ENST00000531466 IL15P40933 162 aaPredicted RBP4.38□□□□□ -1.71
PTPRK-220ENST00000531466 PNLIPRP1P54315 467 aa4.38□□□□□ -1.71
PTPRK-220ENST00000531466 SLC20A2Q08357 652 aa4.38□□□□□ -1.71
PTPRK-220ENST00000531466 STARD3Q14849 445 aa4.38□□□□□ -1.71
PTPRK-220ENST00000531466 GGT6Q6P531 493 aa4.38□□□□□ -1.71
PTPRK-220ENST00000531466 ZNF248Q8NDW4 579 aa4.38□□□□□ -1.71
PTPRK-220ENST00000531466 PJA1Q8NG27 643 aa4.38□□□□□ -1.71
PTPRK-220ENST00000531466 HERC2P3Q9BVR0 1158 aa4.38□□□□□ -1.71
PTPRK-220ENST00000531466 PRDM8Q9NQV8 689 aa4.38□□□□□ -1.71
PTPRK-220ENST00000531466 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.37□□□□□ -1.71
PTPRK-220ENST00000531466 CRLF1O75462 422 aa4.37□□□□□ -1.71
PTPRK-220ENST00000531466 CDH1P12830 882 aa4.37□□□□□ -1.71
PTPRK-220ENST00000531466 ZNF10P21506 573 aaPredicted RBP4.37□□□□□ -1.71
PTPRK-220ENST00000531466 TTKP33981 857 aa4.37□□□□□ -1.71
PTPRK-220ENST00000531466 GJC1P36383 396 aa4.37□□□□□ -1.71
PTPRK-220ENST00000531466 CENPAP49450 140 aa4.37□□□□□ -1.71
PTPRK-220ENST00000531466 AP2B1P63010 937 aa4.37□□□□□ -1.71
PTPRK-220ENST00000531466 ARHGAP8P85298 464 aa4.37□□□□□ -1.71
PTPRK-220ENST00000531466 RELQ04864 619 aaPredicted RBP4.37□□□□□ -1.71
PTPRK-220ENST00000531466 PTK2BQ14289 1009 aa4.37□□□□□ -1.71
PTPRK-220ENST00000531466 RRAGAQ7L523 313 aa4.37□□□□□ -1.71
PTPRK-220ENST00000531466 NFE4Q86UQ8 179 aa4.37□□□□□ -1.71
PTPRK-220ENST00000531466 ODF3L1Q8IXM7 274 aa4.37□□□□□ -1.71
PTPRK-220ENST00000531466 FSIP1Q8NA03 581 aa4.37□□□□□ -1.71
PTPRK-220ENST00000531466 SETD9Q8NE22 299 aa4.37□□□□□ -1.71
PTPRK-220ENST00000531466 DCTN5Q9BTE1 182 aa4.37□□□□□ -1.71
PTPRK-220ENST00000531466 CSTL1Q9H114 145 aa4.37□□□□□ -1.71
PTPRK-220ENST00000531466 CYSLTR2Q9NS75 346 aa4.37□□□□□ -1.71
PTPRK-220ENST00000531466 SPATS2LQ9NUQ6 558 aaKnown RBP4.37□□□□□ -1.71
PTPRK-220ENST00000531466 HDAC6Q9UBN7 1215 aa4.37□□□□□ -1.71
PTPRK-220ENST00000531466 POU2F3Q9UKI9 436 aa4.37□□□□□ -1.71
PTPRK-220ENST00000531466 ANO9A1A5B4 782 aa4.36□□□□□ -1.71
PTPRK-220ENST00000531466 LILRA5A6NI73 299 aa4.36□□□□□ -1.71
PTPRK-220ENST00000531466 FAM90A20PA6NIJ5 464 aa4.36□□□□□ -1.71
PTPRK-220ENST00000531466 PMS2P5A8MQ11 134 aa4.36□□□□□ -1.71
PTPRK-220ENST00000531466 LGALS16A8MUM7 142 aa4.36□□□□□ -1.71
PTPRK-220ENST00000531466 SYT5O00445 386 aa4.36□□□□□ -1.71
PTPRK-220ENST00000531466 NDUFS7O75251 213 aa4.36□□□□□ -1.71
PTPRK-220ENST00000531466 RGS11O94810 467 aa4.36□□□□□ -1.71
PTPRK-220ENST00000531466 TECP42680 631 aa4.36□□□□□ -1.71
PTPRK-220ENST00000531466 ARSFP54793 590 aa4.36□□□□□ -1.71
PTPRK-220ENST00000531466 DRG2P55039 364 aaKnown RBP4.36□□□□□ -1.71
PTPRK-220ENST00000531466 HDAC4P56524 1084 aa4.36□□□□□ -1.71
PTPRK-220ENST00000531466 EFNB3Q15768 340 aa4.36□□□□□ -1.71
PTPRK-220ENST00000531466 LPAL2Q16609 132 aa4.36□□□□□ -1.71
PTPRK-220ENST00000531466 FBXO43Q4G163 708 aa4.36□□□□□ -1.71
PTPRK-220ENST00000531466 ARHGAP17Q68EM7 881 aa4.36□□□□□ -1.71
PTPRK-220ENST00000531466 FAM122CQ6P4D5 195 aa4.36□□□□□ -1.71
PTPRK-220ENST00000531466 WDR73Q6P4I2 378 aa4.36□□□□□ -1.71
PTPRK-220ENST00000531466 CCNI2Q6ZMN8 369 aaPredicted RBP4.36□□□□□ -1.71
PTPRK-220ENST00000531466 RINLQ6ZS11 566 aa4.36□□□□□ -1.71
PTPRK-220ENST00000531466 SLC24A4Q8NFF2 622 aa4.36□□□□□ -1.71
PTPRK-220ENST00000531466 BBS10Q8TAM1 723 aa4.36□□□□□ -1.71
PTPRK-220ENST00000531466 EID2BQ96D98 161 aa4.36□□□□□ -1.71
PTPRK-220ENST00000531466 ZNF599Q96NL3 588 aa4.36□□□□□ -1.71
PTPRK-220ENST00000531466 PYGO2Q9BRQ0 406 aa4.36□□□□□ -1.71
PTPRK-220ENST00000531466 PLEKHA2Q9HB19 425 aa4.36□□□□□ -1.71
PTPRK-220ENST00000531466 TMLHEQ9NVH6 421 aa4.36□□□□□ -1.71
PTPRK-220ENST00000531466 CDC23Q9UJX2 597 aa4.36□□□□□ -1.71
PTPRK-220ENST00000531466 CDC14AQ9UNH5 594 aa4.36□□□□□ -1.71
PTPRK-220ENST00000531466 CLDN16Q9Y5I7 305 aa4.36□□□□□ -1.71
PTPRK-220ENST00000531466 GOLGA6L3A6NEY3 463 aa4.35□□□□□ -1.71
PTPRK-220ENST00000531466 SOCS6O14544 535 aa4.35□□□□□ -1.71
PTPRK-220ENST00000531466 HBP1O60381 514 aa4.35□□□□□ -1.71
PTPRK-220ENST00000531466 ATP2C2O75185 946 aa4.35□□□□□ -1.71
PTPRK-220ENST00000531466 METTL18O95568 372 aa4.35□□□□□ -1.71
PTPRK-220ENST00000531466 SERPINC1P01008 464 aa4.35□□□□□ -1.71
PTPRK-220ENST00000531466 HLA-DOBP13765 273 aa4.35□□□□□ -1.71
PTPRK-220ENST00000531466 CD53P19397 219 aa4.35□□□□□ -1.71
PTPRK-220ENST00000531466 PPIGQ13427 754 aaKnown RBP eCLIP4.35□□□□□ -1.71
PTPRK-220ENST00000531466 ZNF876PQ49A33 203 aa4.35□□□□□ -1.71
PTPRK-220ENST00000531466 ZNF484Q5JVG2 852 aa4.35□□□□□ -1.71
PTPRK-220ENST00000531466 ZC2HC1BQ5TFG8 222 aa4.35□□□□□ -1.71
PTPRK-220ENST00000531466 FAM186BQ8IYM0 893 aa4.35□□□□□ -1.71
PTPRK-220ENST00000531466 GHDCQ8N2G8 530 aa4.35□□□□□ -1.71
PTPRK-220ENST00000531466 SRBD1Q8N5C6 995 aaKnown RBP4.35□□□□□ -1.71
PTPRK-220ENST00000531466 METTL27Q8N6F8 245 aaPredicted RBP4.35□□□□□ -1.71
PTPRK-220ENST00000531466 DEPTORQ8TB45 409 aa4.35□□□□□ -1.71
PTPRK-220ENST00000531466 NCSTNQ92542 709 aa4.35□□□□□ -1.71
PTPRK-220ENST00000531466 ERGIC1Q969X5 290 aa4.35□□□□□ -1.71
PTPRK-220ENST00000531466 TMEM41AQ96HV5 264 aa4.35□□□□□ -1.71
PTPRK-220ENST00000531466 POLR3GLQ9BT43 218 aa4.35□□□□□ -1.71
PTPRK-220ENST00000531466 PABPC3Q9H361 631 aaKnown RBP4.35□□□□□ -1.71
PTPRK-220ENST00000531466 KLHL1Q9NR64 748 aa4.35□□□□□ -1.71
PTPRK-220ENST00000531466 ASPDHA6ND91 283 aa4.34□□□□□ -1.71
PTPRK-220ENST00000531466 WNT9BO14905 357 aa4.34□□□□□ -1.71
PTPRK-220ENST00000531466 RFPL2O75678 378 aa4.34□□□□□ -1.71
PTPRK-220ENST00000531466 ADAP00813 363 aa4.34□□□□□ -1.71
PTPRK-220ENST00000531466 CSF1P09603 554 aa4.34□□□□□ -1.71
PTPRK-220ENST00000531466 PNPLA4P41247 253 aa4.34□□□□□ -1.71
PTPRK-220ENST00000531466 AK2P54819 239 aa4.34□□□□□ -1.71
PTPRK-220ENST00000531466 THOC5Q13769 683 aaKnown RBP4.34□□□□□ -1.71
PTPRK-220ENST00000531466 LCE3AQ5TA76 89 aa4.34□□□□□ -1.71
PTPRK-220ENST00000531466 CES5AQ6NT32 575 aa4.34□□□□□ -1.71
PTPRK-220ENST00000531466 KLHL17Q6TDP4 642 aa4.34□□□□□ -1.71
PTPRK-220ENST00000531466 SYT13Q7L8C5 426 aa4.34□□□□□ -1.71
PTPRK-220ENST00000531466 SH2D6Q7Z4S9 175 aa4.34□□□□□ -1.71
PTPRK-220ENST00000531466 C11orf96Q7Z7L8 435 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms