RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 MGEA5O60502 916 aa3.26□□□□□ -1.89
CSDE1-208ENST00000524652 TDP2O95551 362 aa3.26□□□□□ -1.89
CSDE1-208ENST00000524652 HRGP04196 525 aa3.26□□□□□ -1.89
CSDE1-208ENST00000524652 FGF2P09038 288 aa3.26□□□□□ -1.89
CSDE1-208ENST00000524652 HOXC6P09630 235 aa3.26□□□□□ -1.89
CSDE1-208ENST00000524652 FAM86B2P0C5J1 330 aa3.26□□□□□ -1.89
CSDE1-208ENST00000524652 POLR2MP0CAP2 368 aa3.26□□□□□ -1.89
CSDE1-208ENST00000524652 CYBAP13498 195 aa3.26□□□□□ -1.89
CSDE1-208ENST00000524652 RPL17P18621 184 aaKnown RBP3.26□□□□□ -1.89
CSDE1-208ENST00000524652 U2AF2P26368 475 aaKnown RBP eCLIP3.26□□□□□ -1.89
CSDE1-208ENST00000524652 CCND3P30281 292 aaPredicted RBP3.26□□□□□ -1.89
CSDE1-208ENST00000524652 GALNSP34059 522 aa3.26□□□□□ -1.89
CSDE1-208ENST00000524652 NLRP5P59047 1200 aa3.26□□□□□ -1.89
CSDE1-208ENST00000524652 CCNA1P78396 465 aa3.26□□□□□ -1.89
CSDE1-208ENST00000524652 HMGN5P82970 282 aaKnown RBP3.26□□□□□ -1.89
CSDE1-208ENST00000524652 KCNAB1Q14722 419 aa3.26□□□□□ -1.89
CSDE1-208ENST00000524652 ODR4Q5SWX8 454 aa3.26□□□□□ -1.89
CSDE1-208ENST00000524652 MAP3K21Q5TCX8 1036 aa3.26□□□□□ -1.89
CSDE1-208ENST00000524652 RNF220Q5VTB9 566 aa3.26□□□□□ -1.89
CSDE1-208ENST00000524652 ANO1Q5XXA6 986 aa3.26□□□□□ -1.89
CSDE1-208ENST00000524652 GRHL2Q6ISB3 625 aa3.26□□□□□ -1.89
CSDE1-208ENST00000524652 PIK3AP1Q6ZUJ8 805 aa3.26□□□□□ -1.89
CSDE1-208ENST00000524652 UNC13DQ70J99 1090 aa3.26□□□□□ -1.89
CSDE1-208ENST00000524652 ARMCX2Q7L311 632 aa3.26□□□□□ -1.89
CSDE1-208ENST00000524652 P3H2Q8IVL5 708 aa3.26□□□□□ -1.89
CSDE1-208ENST00000524652 FBXO16Q8IX29 292 aaPredicted RBP3.26□□□□□ -1.89
CSDE1-208ENST00000524652 DIS3L2Q8IYB7 885 aaKnown RBP3.26□□□□□ -1.89
CSDE1-208ENST00000524652 TCEAL8Q8IYN2 117 aa3.26□□□□□ -1.89
CSDE1-208ENST00000524652 BLIDQ8IZY5 108 aa3.26□□□□□ -1.89
CSDE1-208ENST00000524652 SDR16C5Q8N3Y7 309 aa3.26□□□□□ -1.89
CSDE1-208ENST00000524652 FSTL5Q8N475 847 aaPredicted RBP3.26□□□□□ -1.89
CSDE1-208ENST00000524652 ZNF713Q8N859 430 aaPredicted RBP3.26□□□□□ -1.89
CSDE1-208ENST00000524652 SMRP1Q8NCR6 262 aa3.26□□□□□ -1.89
CSDE1-208ENST00000524652 MORC4Q8TE76 937 aa3.26□□□□□ -1.89
CSDE1-208ENST00000524652 TBCKQ8TEA7 893 aa3.26□□□□□ -1.89
CSDE1-208ENST00000524652 TRMT61AQ96FX7 289 aaKnown RBP3.26□□□□□ -1.89
CSDE1-208ENST00000524652 ERO1AQ96HE7 468 aa3.26□□□□□ -1.89
CSDE1-208ENST00000524652 C8orf76Q96K31 380 aa3.26□□□□□ -1.89
CSDE1-208ENST00000524652 FTOQ9C0B1 505 aaKnown RBP eCLIP3.26□□□□□ -1.89
CSDE1-208ENST00000524652 HIPK2Q9H2X6 1198 aa3.26□□□□□ -1.89
CSDE1-208ENST00000524652 PSTPIP2Q9H939 334 aa3.26□□□□□ -1.89
CSDE1-208ENST00000524652 TMEM8AQ9HCN3 771 aa3.26□□□□□ -1.89
CSDE1-208ENST00000524652 SH3GLB2Q9NR46 395 aa3.26□□□□□ -1.89
CSDE1-208ENST00000524652 TMEM45AQ9NWC5 275 aa3.26□□□□□ -1.89
CSDE1-208ENST00000524652 ZNF212Q9UDV6 495 aa3.26□□□□□ -1.89
CSDE1-208ENST00000524652 FBXO40Q9UH90 709 aa3.26□□□□□ -1.89
CSDE1-208ENST00000524652 SMC3Q9UQE7 1217 aa3.26□□□□□ -1.89
CSDE1-208ENST00000524652 HPSEQ9Y251 543 aa3.26□□□□□ -1.89
CSDE1-208ENST00000524652 MRPL11Q9Y3B7 192 aaKnown RBP3.26□□□□□ -1.89
CSDE1-208ENST00000524652 SIRT4Q9Y6E7 314 aaPredicted RBP3.26□□□□□ -1.89
CSDE1-208ENST00000524652 ANK1P16157 1881 aa3.25□□□□□ -1.89
CSDE1-208ENST00000524652 VPS37CA5D8V6 355 aaPredicted RBP3.25□□□□□ -1.89
CSDE1-208ENST00000524652 F8W810 466 aa3.25□□□□□ -1.89
CSDE1-208ENST00000524652 CTAGE5O15320 804 aa3.25□□□□□ -1.89
CSDE1-208ENST00000524652 STX6O43752 255 aa3.25□□□□□ -1.89
CSDE1-208ENST00000524652 ATP9AO75110 1047 aa3.25□□□□□ -1.89
CSDE1-208ENST00000524652 WDR47O94967 919 aa3.25□□□□□ -1.89
CSDE1-208ENST00000524652 SCGB1D2O95969 90 aa3.25□□□□□ -1.89
CSDE1-208ENST00000524652 ZBED1O96006 694 aa3.25□□□□□ -1.89
CSDE1-208ENST00000524652 MT-ND5P03915 603 aa3.25□□□□□ -1.89
CSDE1-208ENST00000524652 T-ENOLP0DO92 83 aa3.25□□□□□ -1.89
CSDE1-208ENST00000524652 ARP10275 920 aa3.25□□□□□ -1.89
CSDE1-208ENST00000524652 COPB2P35606 906 aa3.25□□□□□ -1.89
CSDE1-208ENST00000524652 KRT2P35908 639 aa3.25□□□□□ -1.89
CSDE1-208ENST00000524652 RGS2P41220 211 aa3.25□□□□□ -1.89
CSDE1-208ENST00000524652 ALDH7A1P49419 539 aaKnown RBP3.25□□□□□ -1.89
CSDE1-208ENST00000524652 DGKQP52824 942 aa3.25□□□□□ -1.89
CSDE1-208ENST00000524652 FAM193AP78312 1265 aa3.25□□□□□ -1.89
CSDE1-208ENST00000524652 RAE1P78406 368 aaKnown RBP3.25□□□□□ -1.89
CSDE1-208ENST00000524652 AKAP17AQ02040 695 aaKnown RBP3.25□□□□□ -1.89
CSDE1-208ENST00000524652 MTAPQ13126 283 aa3.25□□□□□ -1.89
CSDE1-208ENST00000524652 ACOX1Q15067 660 aa3.25□□□□□ -1.89
CSDE1-208ENST00000524652 IL17AQ16552 155 aa3.25□□□□□ -1.89
CSDE1-208ENST00000524652 MANEAQ5SRI9 462 aa3.25□□□□□ -1.89
CSDE1-208ENST00000524652 ZNF549Q6P9A3 640 aa3.25□□□□□ -1.89
CSDE1-208ENST00000524652 DARS2Q6PI48 645 aaKnown RBP3.25□□□□□ -1.89
CSDE1-208ENST00000524652 CPLX2Q6PUV4 134 aaKnown RBP3.25□□□□□ -1.89
CSDE1-208ENST00000524652 RBM44Q6ZP01 1051 aaKnown RBP3.25□□□□□ -1.89
CSDE1-208ENST00000524652 CCDC149Q6ZUS6 474 aa3.25□□□□□ -1.89
CSDE1-208ENST00000524652 TFAP2DQ7Z6R9 452 aa3.25□□□□□ -1.89
CSDE1-208ENST00000524652 CTU1Q7Z7A3 348 aaKnown RBP3.25□□□□□ -1.89
CSDE1-208ENST00000524652 DPP9Q86TI2 863 aa3.25□□□□□ -1.89
CSDE1-208ENST00000524652 ADHFE1Q8IWW8 467 aa3.25□□□□□ -1.89
CSDE1-208ENST00000524652 C4orf32Q8N8J7 132 aa3.25□□□□□ -1.89
CSDE1-208ENST00000524652 FAM184AQ8NB25 1140 aa3.25□□□□□ -1.89
CSDE1-208ENST00000524652 FAM156AQ8NDB6 213 aa3.25□□□□□ -1.89
CSDE1-208ENST00000524652 CCDC148Q8NFR7 591 aa3.25□□□□□ -1.89
CSDE1-208ENST00000524652 SUN3Q8TAQ9 357 aa3.25□□□□□ -1.89
CSDE1-208ENST00000524652 PIGKQ92643 395 aa3.25□□□□□ -1.89
CSDE1-208ENST00000524652 THOC3Q96J01 351 aaKnown RBP3.25□□□□□ -1.89
CSDE1-208ENST00000524652 ZNF333Q96JL9 665 aa3.25□□□□□ -1.89
CSDE1-208ENST00000524652 SNX22Q96L94 193 aa3.25□□□□□ -1.89
CSDE1-208ENST00000524652 MBOAT7Q96N66 472 aa3.25□□□□□ -1.89
CSDE1-208ENST00000524652 INPP4AQ96PE3 977 aaPredicted RBP3.25□□□□□ -1.89
CSDE1-208ENST00000524652 RMDN3Q96TC7 470 aa3.25□□□□□ -1.89
CSDE1-208ENST00000524652 TUBB6Q9BUF5 446 aa3.25□□□□□ -1.89
CSDE1-208ENST00000524652 AGO4Q9HCK5 861 aaKnown RBP3.25□□□□□ -1.89
CSDE1-208ENST00000524652 C6orf50Q9HD87 102 aa3.25□□□□□ -1.89
CSDE1-208ENST00000524652 PAPOLBQ9NRJ5 636 aaKnown RBP3.25□□□□□ -1.89
CSDE1-208ENST00000524652 DECR2Q9NUI1 292 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms