RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 MYF6P23409 242 aa4.08□□□□□ -1.76
SKP1-212ENST00000523966 TTKP33981 857 aa4.08□□□□□ -1.76
SKP1-212ENST00000523966 PPP3CCP48454 512 aa4.08□□□□□ -1.76
SKP1-212ENST00000523966 PKP1Q13835 747 aa4.08□□□□□ -1.76
SKP1-212ENST00000523966 PRAMEF19Q5SWL8 479 aa4.08□□□□□ -1.76
SKP1-212ENST00000523966 OTUD1Q5VV17 481 aaPredicted RBP4.08□□□□□ -1.76
SKP1-212ENST00000523966 TXNDC8Q6A555 127 aa4.08□□□□□ -1.76
SKP1-212ENST00000523966 TMEM71Q6P5X7 295 aa4.08□□□□□ -1.76
SKP1-212ENST00000523966 TMEM154Q6P9G4 183 aa4.08□□□□□ -1.76
SKP1-212ENST00000523966 CCDC129Q6ZRS4 1044 aa4.08□□□□□ -1.76
SKP1-212ENST00000523966 COLCA1Q6ZS62 124 aa4.08□□□□□ -1.76
SKP1-212ENST00000523966 IKBIPQ70UQ0 350 aa4.08□□□□□ -1.76
SKP1-212ENST00000523966 MON1BQ7L1V2 547 aa4.08□□□□□ -1.76
SKP1-212ENST00000523966 PXKQ7Z7A4 578 aa4.08□□□□□ -1.76
SKP1-212ENST00000523966 PATL1Q86TB9 770 aaKnown RBP4.08□□□□□ -1.76
SKP1-212ENST00000523966 GPSM1Q86YR5 675 aa4.08□□□□□ -1.76
SKP1-212ENST00000523966 ARHGEF2Q92974 986 aaKnown RBP4.08□□□□□ -1.76
SKP1-212ENST00000523966 VCPIP1Q96JH7 1222 aa4.08□□□□□ -1.76
SKP1-212ENST00000523966 MAP7D2Q96T17 732 aa4.08□□□□□ -1.76
SKP1-212ENST00000523966 WDR77Q9BQA1 342 aaPredicted RBP4.08□□□□□ -1.76
SKP1-212ENST00000523966 FTOQ9C0B1 505 aaKnown RBP eCLIP4.08□□□□□ -1.76
SKP1-212ENST00000523966 SMARCAD1Q9H4L7 1026 aa4.08□□□□□ -1.76
SKP1-212ENST00000523966 SH2D4AQ9H788 454 aa4.08□□□□□ -1.76
SKP1-212ENST00000523966 MAP6D1Q9H9H5 199 aa4.08□□□□□ -1.76
SKP1-212ENST00000523966 FBRSL1Q9HCM7 1045 aaKnown RBP4.08□□□□□ -1.76
SKP1-212ENST00000523966 KRCC1Q9NPI7 259 aaPredicted RBP4.08□□□□□ -1.76
SKP1-212ENST00000523966 ASAH2Q9NR71 780 aa4.08□□□□□ -1.76
SKP1-212ENST00000523966 RRP7BPQ9NSQ0 103 aa4.08□□□□□ -1.76
SKP1-212ENST00000523966 HAUS2Q9NVX0 235 aa4.08□□□□□ -1.76
SKP1-212ENST00000523966 HCFC1R1Q9NWW0 138 aa4.08□□□□□ -1.76
SKP1-212ENST00000523966 TERF2IPQ9NYB0 399 aa4.08□□□□□ -1.76
SKP1-212ENST00000523966 NCKIPSDQ9NZQ3 722 aa4.08□□□□□ -1.76
SKP1-212ENST00000523966 PIAS3Q9Y6X2 628 aa4.08□□□□□ -1.76
SKP1-212ENST00000523966 A0A0G2JK05 382 aa4.07□□□□□ -1.76
SKP1-212ENST00000523966 RPS10-NUDT3A0A1W2PQS6 291 aa4.07□□□□□ -1.76
SKP1-212ENST00000523966 A0A1W2PRG0 241 aa4.07□□□□□ -1.76
SKP1-212ENST00000523966 CBY3A6NI87 242 aa4.07□□□□□ -1.76
SKP1-212ENST00000523966 KDM4EB2RXH2 506 aaPredicted RBP4.07□□□□□ -1.76
SKP1-212ENST00000523966 MS4A18H0YCH9 400 aa4.07□□□□□ -1.76
SKP1-212ENST00000523966 H0YGN5 161 aa4.07□□□□□ -1.76
SKP1-212ENST00000523966 SNAP23O00161 211 aa4.07□□□□□ -1.76
SKP1-212ENST00000523966 BCAT2O15382 392 aaPredicted RBP4.07□□□□□ -1.76
SKP1-212ENST00000523966 ITM2AO43736 263 aa4.07□□□□□ -1.76
SKP1-212ENST00000523966 ATG13O75143 517 aa4.07□□□□□ -1.76
SKP1-212ENST00000523966 IPO7O95373 1038 aaKnown RBP4.07□□□□□ -1.76
SKP1-212ENST00000523966 EIF2S1P05198 315 aaKnown RBP4.07□□□□□ -1.76
SKP1-212ENST00000523966 HSP90AA1P07900 732 aaKnown RBP4.07□□□□□ -1.76
SKP1-212ENST00000523966 CD58P19256 250 aa4.07□□□□□ -1.76
SKP1-212ENST00000523966 CDAP32320 146 aa4.07□□□□□ -1.76
SKP1-212ENST00000523966 RYKP34925 604 aa4.07□□□□□ -1.76
SKP1-212ENST00000523966 RASSF2P50749 326 aa4.07□□□□□ -1.76
SKP1-212ENST00000523966 DRG2P55039 364 aaKnown RBP4.07□□□□□ -1.76
SKP1-212ENST00000523966 CLDN2P57739 230 aa4.07□□□□□ -1.76
SKP1-212ENST00000523966 SSBP2P81877 361 aaPredicted RBP4.07□□□□□ -1.76
SKP1-212ENST00000523966 PRKG2Q13237 762 aa4.07□□□□□ -1.76
SKP1-212ENST00000523966 GPR18Q14330 331 aa4.07□□□□□ -1.76
SKP1-212ENST00000523966 NEDD9Q14511 834 aa4.07□□□□□ -1.76
SKP1-212ENST00000523966 MED22Q15528 200 aa4.07□□□□□ -1.76
SKP1-212ENST00000523966 GPATCH4Q5T3I0 446 aaKnown RBP4.07□□□□□ -1.76
SKP1-212ENST00000523966 DCAF12L2Q5VW00 463 aa4.07□□□□□ -1.76
SKP1-212ENST00000523966 SNX30Q5VWJ9 437 aa4.07□□□□□ -1.76
SKP1-212ENST00000523966 LRRC8EQ6NSJ5 796 aa4.07□□□□□ -1.76
SKP1-212ENST00000523966 CLEC4GQ6UXB4 293 aa4.07□□□□□ -1.76
SKP1-212ENST00000523966 Q6ZTK2 550 aa4.07□□□□□ -1.76
SKP1-212ENST00000523966 FASTKD5Q7L8L6 764 aaKnown RBP4.07□□□□□ -1.76
SKP1-212ENST00000523966 DHX40Q8IX18 779 aaKnown RBP4.07□□□□□ -1.76
SKP1-212ENST00000523966 RPAP2Q8IXW5 612 aaPredicted RBP4.07□□□□□ -1.76
SKP1-212ENST00000523966 TEX11Q8IYF3 940 aa4.07□□□□□ -1.76
SKP1-212ENST00000523966 TMEM116Q8NCL8 245 aa4.07□□□□□ -1.76
SKP1-212ENST00000523966 C1orf131Q8NDD1 294 aaKnown RBP4.07□□□□□ -1.76
SKP1-212ENST00000523966 NTN5Q8WTR8 489 aaPredicted RBP4.07□□□□□ -1.76
SKP1-212ENST00000523966 SCFD2Q8WU76 684 aa4.07□□□□□ -1.76
SKP1-212ENST00000523966 USP6NLQ92738 828 aa4.07□□□□□ -1.76
SKP1-212ENST00000523966 FBXL8Q96CD0 374 aa4.07□□□□□ -1.76
SKP1-212ENST00000523966 MSI2Q96DH6 328 aaKnown RBP4.07□□□□□ -1.76
SKP1-212ENST00000523966 TMEM68Q96MH6 324 aa4.07□□□□□ -1.76
SKP1-212ENST00000523966 POLDIP3Q9BY77 421 aaKnown RBP4.07□□□□□ -1.76
SKP1-212ENST00000523966 NPFFR1Q9GZQ6 430 aa4.07□□□□□ -1.76
SKP1-212ENST00000523966 MUC13Q9H3R2 512 aa4.07□□□□□ -1.76
SKP1-212ENST00000523966 KLHL31Q9H511 634 aa4.07□□□□□ -1.76
SKP1-212ENST00000523966 KAT14Q9H8E8 782 aa4.07□□□□□ -1.76
SKP1-212ENST00000523966 KIF9Q9HAQ2 790 aa4.07□□□□□ -1.76
SKP1-212ENST00000523966 MAGEE1Q9HCI5 957 aa4.07□□□□□ -1.76
SKP1-212ENST00000523966 SLC6A13Q9NSD5 602 aa4.07□□□□□ -1.76
SKP1-212ENST00000523966 SIRT3Q9NTG7 399 aaPredicted RBP4.07□□□□□ -1.76
SKP1-212ENST00000523966 SEPT11Q9NVA2 429 aaKnown RBP4.07□□□□□ -1.76
SKP1-212ENST00000523966 INTS6Q9UL03 887 aaKnown RBP4.07□□□□□ -1.76
SKP1-212ENST00000523966 MKLN1Q9UL63 735 aa4.07□□□□□ -1.76
SKP1-212ENST00000523966 CORO1CQ9ULV4 474 aaPredicted RBP4.07□□□□□ -1.76
SKP1-212ENST00000523966 MTMR6Q9Y217 621 aa4.07□□□□□ -1.76
SKP1-212ENST00000523966 LSM4Q9Y4Z0 139 aaKnown RBP4.07□□□□□ -1.76
SKP1-212ENST00000523966 RUSC2Q8N2Y8 1516 aa4.06□□□□□ -1.76
SKP1-212ENST00000523966 ZCCHC6Q5VYS8 1495 aaKnown RBP4.06□□□□□ -1.76
SKP1-212ENST00000523966 HSPB2A8KAH6 182 aa4.06□□□□□ -1.76
SKP1-212ENST00000523966 AKR1B15C9JRZ8 316 aaPredicted RBP4.06□□□□□ -1.76
SKP1-212ENST00000523966 PTGES3LE9PB15 166 aa4.06□□□□□ -1.76
SKP1-212ENST00000523966 LDLRAD4O15165 306 aa4.06□□□□□ -1.76
SKP1-212ENST00000523966 ASAP2O43150 1006 aa4.06□□□□□ -1.76
SKP1-212ENST00000523966 TSPAN9O75954 239 aa4.06□□□□□ -1.76
SKP1-212ENST00000523966 RGS11O94810 467 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms